EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000003412 (Gene tree)
Gene ID: 100511264
Gene Symbol: EXOSC10
Alias: PM-Scl|PM/Scl-100|PMSCL2|RRP6|Rrp6p|p2|p3|p4
Full Name: exosome component 10
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 25574 bases
Position: chr6:71256920-71282493
Accession: 100511264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003698	HRDC	PF00570.23	8.9e-13	1	1
ENSSSCP00000003698	PMC2NT	PF08066.12	4.3e-08	1	1
ENSSSCP00000003698	DNA_pol_A_exo1	PF01612.20	6.6e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003785	EXOSC10-201	4934	XM_013998976	ENSSSCP00000003698	803 (aa)	XP_013854430	F1RHR9

Gene Model

Click here to download ENSSSCG00000003412's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003412	EXOSC10	100	90.037	ENSG00000171824	EXOSC10	91	90.037	Homo_sapiens
ENSSSCG00000003412	EXOSC10	100	62.149	ENSAPOG00000013304	exosc10	90	62.149	Acanthochromis_polyacanthus
ENSSSCG00000003412	EXOSC10	100	90.423	ENSAMEG00000009546	EXOSC10	91	90.423	Ailuropoda_melanoleuca
ENSSSCG00000003412	EXOSC10	97	58.876	ENSACIG00000020455	exosc10	87	60.104	Amphilophus_citrinellus
ENSSSCG00000003412	EXOSC10	100	60.870	ENSAOCG00000018823	exosc10	89	61.615	Amphiprion_ocellaris
ENSSSCG00000003412	EXOSC10	100	61.783	ENSAPEG00000017786	exosc10	89	61.905	Amphiprion_percula
ENSSSCG00000003412	EXOSC10	100	61.091	ENSATEG00000017271	exosc10	90	61.091	Anabas_testudineus
ENSSSCG00000003412	EXOSC10	100	74.257	ENSAPLG00000006652	EXOSC10	93	74.257	Anas_platyrhynchos
ENSSSCG00000003412	EXOSC10	100	90.162	ENSANAG00000031112	EXOSC10	96	90.162	Aotus_nancymaae
ENSSSCG00000003412	EXOSC10	100	61.595	ENSACLG00000025226	exosc10	91	61.214	Astatotilapia_calliptera
ENSSSCG00000003412	EXOSC10	100	58.675	ENSAMXG00000014510	exosc10	90	58.675	Astyanax_mexicanus
ENSSSCG00000003412	EXOSC10	76	95.261	ENSBTAG00000002590	EXOSC10	87	95.261	Bos_taurus
ENSSSCG00000003412	EXOSC10	76	33.803	WBGene00000796	crn-3	69	33.803	Caenorhabditis_elegans
ENSSSCG00000003412	EXOSC10	100	90.037	ENSCJAG00000002327	EXOSC10	91	90.037	Callithrix_jacchus
ENSSSCG00000003412	EXOSC10	100	91.667	ENSCAFG00000016721	EXOSC10	88	91.667	Canis_familiaris
ENSSSCG00000003412	EXOSC10	100	91.667	ENSCAFG00020002481	EXOSC10	88	91.667	Canis_lupus_dingo
ENSSSCG00000003412	EXOSC10	100	87.361	ENSCHIG00000020022	EXOSC10	90	87.361	Capra_hircus
ENSSSCG00000003412	EXOSC10	100	88.917	ENSTSYG00000006937	EXOSC10	93	88.917	Carlito_syrichta
ENSSSCG00000003412	EXOSC10	100	88.418	ENSCAPG00000006494	EXOSC10	93	88.418	Cavia_aperea
ENSSSCG00000003412	EXOSC10	100	88.418	ENSCPOG00000011628	EXOSC10	89	88.418	Cavia_porcellus
ENSSSCG00000003412	EXOSC10	100	90.037	ENSCCAG00000023223	EXOSC10	100	90.037	Cebus_capucinus
ENSSSCG00000003412	EXOSC10	100	90.162	ENSCATG00000039000	EXOSC10	91	90.162	Cercocebus_atys
ENSSSCG00000003412	EXOSC10	100	87.671	ENSCLAG00000005283	EXOSC10	91	87.671	Chinchilla_lanigera
ENSSSCG00000003412	EXOSC10	100	89.788	ENSCSAG00000000788	EXOSC10	91	89.788	Chlorocebus_sabaeus
ENSSSCG00000003412	EXOSC10	99	82.598	ENSCHOG00000012713	EXOSC10	91	82.598	Choloepus_hoffmanni
ENSSSCG00000003412	EXOSC10	100	75.248	ENSCPBG00000022004	EXOSC10	89	75.248	Chrysemys_picta_bellii
ENSSSCG00000003412	EXOSC10	66	48.066	ENSCSAVG00000009049	-	91	48.066	Ciona_savignyi
ENSSSCG00000003412	EXOSC10	100	89.664	ENSCANG00000042813	EXOSC10	91	89.664	Colobus_angolensis_palliatus
ENSSSCG00000003412	EXOSC10	100	87.687	ENSCGRG00001018469	Exosc10	91	87.687	Cricetulus_griseus_chok1gshd
ENSSSCG00000003412	EXOSC10	100	87.687	ENSCGRG00000002278	Exosc10	91	87.687	Cricetulus_griseus_crigri
ENSSSCG00000003412	EXOSC10	100	61.200	ENSCSEG00000005346	exosc10	89	60.832	Cynoglossus_semilaevis
ENSSSCG00000003412	EXOSC10	100	61.661	ENSCVAG00000016429	exosc10	90	61.661	Cyprinodon_variegatus
ENSSSCG00000003412	EXOSC10	100	59.712	ENSDARG00000037708	exosc10	90	60.529	Danio_rerio
ENSSSCG00000003412	EXOSC10	100	89.677	ENSDNOG00000011301	EXOSC10	92	89.677	Dasypus_novemcinctus
ENSSSCG00000003412	EXOSC10	100	81.196	ENSDORG00000003769	Exosc10	90	81.196	Dipodomys_ordii
ENSSSCG00000003412	EXOSC10	66	43.273	FBgn0038269	Rrp6	57	43.273	Drosophila_melanogaster
ENSSSCG00000003412	EXOSC10	96	84.955	ENSETEG00000000830	EXOSC10	90	84.935	Echinops_telfairi
ENSSSCG00000003412	EXOSC10	79	34.992	ENSEBUG00000004395	exosc10	99	35.455	Eptatretus_burgeri
ENSSSCG00000003412	EXOSC10	99	91.206	ENSEASG00005018716	EXOSC10	91	91.206	Equus_asinus_asinus
ENSSSCG00000003412	EXOSC10	100	91.915	ENSECAG00000011639	EXOSC10	91	91.915	Equus_caballus
ENSSSCG00000003412	EXOSC10	86	83.448	ENSEEUG00000001166	EXOSC10	81	83.448	Erinaceus_europaeus
ENSSSCG00000003412	EXOSC10	100	61.472	ENSELUG00000012870	exosc10	89	61.718	Esox_lucius
ENSSSCG00000003412	EXOSC10	100	90.411	ENSFCAG00000000052	EXOSC10	91	90.411	Felis_catus
ENSSSCG00000003412	EXOSC10	100	71.182	ENSFALG00000010287	EXOSC10	90	71.182	Ficedula_albicollis
ENSSSCG00000003412	EXOSC10	100	89.303	ENSFDAG00000002942	EXOSC10	91	89.303	Fukomys_damarensis
ENSSSCG00000003412	EXOSC10	100	59.829	ENSFHEG00000010678	exosc10	90	60.195	Fundulus_heteroclitus
ENSSSCG00000003412	EXOSC10	82	69.048	ENSGMOG00000006131	exosc10	79	69.048	Gadus_morhua
ENSSSCG00000003412	EXOSC10	100	74.015	ENSGALG00000003086	EXOSC10	89	74.015	Gallus_gallus
ENSSSCG00000003412	EXOSC10	99	60.595	ENSGAFG00000019222	exosc10	90	60.471	Gambusia_affinis
ENSSSCG00000003412	EXOSC10	100	61.200	ENSGACG00000007037	exosc10	90	61.980	Gasterosteus_aculeatus
ENSSSCG00000003412	EXOSC10	100	75.371	ENSGAGG00000000251	EXOSC10	100	75.371	Gopherus_agassizii
ENSSSCG00000003412	EXOSC10	100	90.037	ENSGGOG00000010572	EXOSC10	91	90.037	Gorilla_gorilla
ENSSSCG00000003412	EXOSC10	100	57.631	ENSHBUG00000020328	exosc10	90	57.646	Haplochromis_burtoni
ENSSSCG00000003412	EXOSC10	100	88.667	ENSHGLG00000011944	EXOSC10	91	88.667	Heterocephalus_glaber_female
ENSSSCG00000003412	EXOSC10	100	88.667	ENSHGLG00100014444	EXOSC10	91	88.667	Heterocephalus_glaber_male
ENSSSCG00000003412	EXOSC10	100	60.098	ENSHCOG00000016164	exosc10	90	60.294	Hippocampus_comes
ENSSSCG00000003412	EXOSC10	100	59.107	ENSIPUG00000021971	exosc10	90	59.107	Ictalurus_punctatus
ENSSSCG00000003412	EXOSC10	100	89.664	ENSSTOG00000005459	EXOSC10	91	89.664	Ictidomys_tridecemlineatus
ENSSSCG00000003412	EXOSC10	100	87.049	ENSJJAG00000013716	Exosc10	91	87.049	Jaculus_jaculus
ENSSSCG00000003412	EXOSC10	100	60.859	ENSKMAG00000015540	exosc10	90	60.859	Kryptolebias_marmoratus
ENSSSCG00000003412	EXOSC10	100	61.858	ENSLBEG00000022229	exosc10	90	62.225	Labrus_bergylta
ENSSSCG00000003412	EXOSC10	100	68.344	ENSLACG00000016691	EXOSC10	90	68.512	Latimeria_chalumnae
ENSSSCG00000003412	EXOSC10	100	66.054	ENSLOCG00000006443	exosc10	90	65.931	Lepisosteus_oculatus
ENSSSCG00000003412	EXOSC10	100	91.180	ENSLAFG00000016894	EXOSC10	91	91.180	Loxodonta_africana
ENSSSCG00000003412	EXOSC10	100	89.788	ENSMFAG00000038874	EXOSC10	88	89.788	Macaca_fascicularis
ENSSSCG00000003412	EXOSC10	100	89.788	ENSMMUG00000019322	EXOSC10	91	89.788	Macaca_mulatta
ENSSSCG00000003412	EXOSC10	100	89.788	ENSMNEG00000035812	EXOSC10	91	89.788	Macaca_nemestrina
ENSSSCG00000003412	EXOSC10	100	90.162	ENSMLEG00000025160	EXOSC10	91	90.162	Mandrillus_leucophaeus
ENSSSCG00000003412	EXOSC10	99	61.262	ENSMAMG00000019375	exosc10	90	61.262	Mastacembelus_armatus
ENSSSCG00000003412	EXOSC10	100	61.595	ENSMZEG00005013730	exosc10	90	61.350	Maylandia_zebra
ENSSSCG00000003412	EXOSC10	100	73.645	ENSMGAG00000004665	EXOSC10	94	73.645	Meleagris_gallopavo
ENSSSCG00000003412	EXOSC10	64	93.810	ENSMAUG00000019261	Exosc10	84	93.810	Mesocricetus_auratus
ENSSSCG00000003412	EXOSC10	100	89.664	ENSMICG00000003858	EXOSC10	91	89.664	Microcebus_murinus
ENSSSCG00000003412	EXOSC10	64	93.617	ENSMOCG00000016509	Exosc10	87	90.388	Microtus_ochrogaster
ENSSSCG00000003412	EXOSC10	100	59.827	ENSMMOG00000009265	exosc10	90	59.827	Mola_mola
ENSSSCG00000003412	EXOSC10	100	78.483	ENSMODG00000011194	EXOSC10	90	78.856	Monodelphis_domestica
ENSSSCG00000003412	EXOSC10	100	62.073	ENSMALG00000021322	exosc10	90	62.073	Monopterus_albus
ENSSSCG00000003412	EXOSC10	100	86.318	MGP_CAROLIEiJ_G0026802	Exosc10	84	93.810	Mus_caroli
ENSSSCG00000003412	EXOSC10	100	86.443	ENSMUSG00000017264	Exosc10	84	93.810	Mus_musculus
ENSSSCG00000003412	EXOSC10	100	86.692	MGP_PahariEiJ_G0029150	Exosc10	84	93.810	Mus_pahari
ENSSSCG00000003412	EXOSC10	100	86.443	MGP_SPRETEiJ_G0027795	Exosc10	84	93.810	Mus_spretus
ENSSSCG00000003412	EXOSC10	100	90.909	ENSMPUG00000016434	EXOSC10	88	90.909	Mustela_putorius_furo
ENSSSCG00000003412	EXOSC10	100	90.920	ENSMLUG00000004276	EXOSC10	91	90.920	Myotis_lucifugus
ENSSSCG00000003412	EXOSC10	100	89.664	ENSNGAG00000023829	Exosc10	91	89.664	Nannospalax_galili
ENSSSCG00000003412	EXOSC10	100	60.050	ENSNBRG00000006256	exosc10	90	60.174	Neolamprologus_brichardi
ENSSSCG00000003412	EXOSC10	99	89.737	ENSNLEG00000009539	EXOSC10	89	89.737	Nomascus_leucogenys
ENSSSCG00000003412	EXOSC10	71	100.000	ENSMEUG00000007020	-	65	100.000	Notamacropus_eugenii
ENSSSCG00000003412	EXOSC10	100	86.849	ENSOPRG00000012091	EXOSC10	91	86.849	Ochotona_princeps
ENSSSCG00000003412	EXOSC10	100	88.045	ENSODEG00000013285	EXOSC10	91	88.045	Octodon_degus
ENSSSCG00000003412	EXOSC10	86	64.622	ENSONIG00000002322	exosc10	88	64.337	Oreochromis_niloticus
ENSSSCG00000003412	EXOSC10	100	75.123	ENSOANG00000013322	EXOSC10	91	75.368	Ornithorhynchus_anatinus
ENSSSCG00000003412	EXOSC10	100	88.089	ENSOCUG00000013039	EXOSC10	91	88.213	Oryctolagus_cuniculus
ENSSSCG00000003412	EXOSC10	100	60.976	ENSORLG00000005117	exosc10	100	61.341	Oryzias_latipes
ENSSSCG00000003412	EXOSC10	100	60.976	ENSORLG00020013529	exosc10	90	61.341	Oryzias_latipes_hni
ENSSSCG00000003412	EXOSC10	100	61.585	ENSORLG00015005525	exosc10	90	61.585	Oryzias_latipes_hsok
ENSSSCG00000003412	EXOSC10	100	61.290	ENSOMEG00000003337	exosc10	90	61.166	Oryzias_melastigma
ENSSSCG00000003412	EXOSC10	100	83.975	ENSOGAG00000013662	EXOSC10	91	83.975	Otolemur_garnettii
ENSSSCG00000003412	EXOSC10	100	92.689	ENSOARG00000003668	EXOSC10	91	92.689	Ovis_aries
ENSSSCG00000003412	EXOSC10	100	89.728	ENSPPAG00000038356	EXOSC10	91	89.728	Pan_paniscus
ENSSSCG00000003412	EXOSC10	100	90.785	ENSPPRG00000022976	EXOSC10	91	90.785	Panthera_pardus
ENSSSCG00000003412	EXOSC10	96	87.906	ENSPTIG00000012735	EXOSC10	89	87.891	Panthera_tigris_altaica
ENSSSCG00000003412	EXOSC10	100	86.052	ENSPTRG00000000140	EXOSC10	90	86.052	Pan_troglodytes
ENSSSCG00000003412	EXOSC10	99	89.886	ENSPANG00000026088	EXOSC10	90	89.886	Papio_anubis
ENSSSCG00000003412	EXOSC10	100	58.946	ENSPKIG00000013098	exosc10	89	59.191	Paramormyrops_kingsleyae
ENSSSCG00000003412	EXOSC10	100	74.381	ENSPSIG00000005078	EXOSC10	89	74.381	Pelodiscus_sinensis
ENSSSCG00000003412	EXOSC10	63	72.366	ENSPMGG00000022241	exosc10	85	72.366	Periophthalmus_magnuspinnatus
ENSSSCG00000003412	EXOSC10	80	90.610	ENSPEMG00000007753	Exosc10	89	90.610	Peromyscus_maniculatus_bairdii
ENSSSCG00000003412	EXOSC10	56	53.468	ENSPMAG00000006909	exosc10	90	53.468	Petromyzon_marinus
ENSSSCG00000003412	EXOSC10	96	73.511	ENSPCIG00000004840	EXOSC10	87	83.577	Phascolarctos_cinereus
ENSSSCG00000003412	EXOSC10	100	61.934	ENSPFOG00000004744	exosc10	90	61.812	Poecilia_formosa
ENSSSCG00000003412	EXOSC10	100	61.520	ENSPLAG00000010253	exosc10	90	61.397	Poecilia_latipinna
ENSSSCG00000003412	EXOSC10	100	61.934	ENSPMEG00000005740	exosc10	90	61.812	Poecilia_mexicana
ENSSSCG00000003412	EXOSC10	100	61.689	ENSPREG00000016285	exosc10	90	61.765	Poecilia_reticulata
ENSSSCG00000003412	EXOSC10	100	89.788	ENSPPYG00000001891	EXOSC10	88	89.788	Pongo_abelii
ENSSSCG00000003412	EXOSC10	88	82.603	ENSPCAG00000001583	EXOSC10	89	82.603	Procavia_capensis
ENSSSCG00000003412	EXOSC10	100	89.788	ENSPCOG00000013742	EXOSC10	91	89.788	Propithecus_coquereli
ENSSSCG00000003412	EXOSC10	100	92.040	ENSPVAG00000014780	EXOSC10	91	92.040	Pteropus_vampyrus
ENSSSCG00000003412	EXOSC10	100	61.840	ENSPNYG00000007387	exosc10	90	61.595	Pundamilia_nyererei
ENSSSCG00000003412	EXOSC10	100	59.264	ENSPNAG00000028864	exosc10	90	59.833	Pygocentrus_nattereri
ENSSSCG00000003412	EXOSC10	100	86.070	ENSRNOG00000010719	Exosc10	91	86.567	Rattus_norvegicus
ENSSSCG00000003412	EXOSC10	95	84.908	ENSRBIG00000039772	EXOSC10	91	84.908	Rhinopithecus_bieti
ENSSSCG00000003412	EXOSC10	100	89.788	ENSRROG00000036700	EXOSC10	91	89.788	Rhinopithecus_roxellana
ENSSSCG00000003412	EXOSC10	52	38.283	YOR001W	-	54	38.283	Saccharomyces_cerevisiae
ENSSSCG00000003412	EXOSC10	95	89.370	ENSSBOG00000020768	EXOSC10	94	89.370	Saimiri_boliviensis_boliviensis
ENSSSCG00000003412	EXOSC10	100	77.985	ENSSHAG00000013572	EXOSC10	94	78.358	Sarcophilus_harrisii
ENSSSCG00000003412	EXOSC10	96	61.097	ENSSFOG00015004512	exosc10	89	61.568	Scleropages_formosus
ENSSSCG00000003412	EXOSC10	100	61.314	ENSSMAG00000017318	exosc10	90	61.783	Scophthalmus_maximus
ENSSSCG00000003412	EXOSC10	100	61.125	ENSSDUG00000006646	exosc10	90	61.125	Seriola_dumerili
ENSSSCG00000003412	EXOSC10	100	61.247	ENSSLDG00000025554	exosc10	90	61.247	Seriola_lalandi_dorsalis
ENSSSCG00000003412	EXOSC10	86	65.847	ENSSARG00000013171	EXOSC10	94	65.847	Sorex_araneus
ENSSSCG00000003412	EXOSC10	100	75.342	ENSSPUG00000006844	EXOSC10	86	84.720	Sphenodon_punctatus
ENSSSCG00000003412	EXOSC10	100	61.858	ENSSPAG00000007053	exosc10	90	61.980	Stegastes_partitus
ENSSSCG00000003412	EXOSC10	99	71.518	ENSTGUG00000002231	EXOSC10	93	71.518	Taeniopygia_guttata
ENSSSCG00000003412	EXOSC10	100	58.768	ENSTRUG00000012484	exosc10	90	58.768	Takifugu_rubripes
ENSSSCG00000003412	EXOSC10	100	61.310	ENSTNIG00000015181	exosc10	93	60.859	Tetraodon_nigroviridis
ENSSSCG00000003412	EXOSC10	70	100.000	ENSTBEG00000017471	-	63	100.000	Tupaia_belangeri
ENSSSCG00000003412	EXOSC10	100	91.915	ENSTTRG00000001320	EXOSC10	91	91.915	Tursiops_truncatus
ENSSSCG00000003412	EXOSC10	96	90.767	ENSUAMG00000014404	EXOSC10	88	90.874	Ursus_americanus
ENSSSCG00000003412	EXOSC10	100	86.957	ENSUMAG00000023413	EXOSC10	91	87.520	Ursus_maritimus
ENSSSCG00000003412	EXOSC10	69	98.000	ENSVPAG00000004629	EXOSC10	63	98.000	Vicugna_pacos
ENSSSCG00000003412	EXOSC10	100	91.294	ENSVVUG00000027116	EXOSC10	100	91.294	Vulpes_vulpes
ENSSSCG00000003412	EXOSC10	100	60.391	ENSXETG00000006318	exosc10	93	60.391	Xenopus_tropicalis
ENSSSCG00000003412	EXOSC10	100	61.652	ENSXCOG00000004665	exosc10	90	61.529	Xiphophorus_couchianus
ENSSSCG00000003412	EXOSC10	100	61.369	ENSXMAG00000011246	exosc10	90	61.444	Xiphophorus_maculatus