EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000003564 (Gene tree)
Gene ID: 100525877
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 18050 bases
Position: chr6:84200724-84218773
Accession: 100525877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036123	G-patch	PF01585.23	2.5e-08	1	1
ENSSSCP00000003867	G-patch	PF01585.23	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003958	GPATCH3-201	3963	XM_003127719	ENSSSCP00000003867	535 (aa)	XP_003127767	F1STR8
ENSSSCT00000063268	GPATCH3-202	4134	-	ENSSSCP00000036123	464 (aa)	-	A0A286ZWX6

Gene Model

Click here to download ENSSSCG00000003564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003564	GPATCH3	99	86.087	ENSG00000198746	GPATCH3	100	93.750	Homo_sapiens
ENSSSCG00000003564	GPATCH3	93	56.385	ENSAPOG00000001212	gpatch3	97	56.385	Acanthochromis_polyacanthus
ENSSSCG00000003564	GPATCH3	97	89.615	ENSAMEG00000010801	GPATCH3	100	89.808	Ailuropoda_melanoleuca
ENSSSCG00000003564	GPATCH3	93	57.367	ENSAOCG00000019352	gpatch3	97	57.367	Amphiprion_ocellaris
ENSSSCG00000003564	GPATCH3	93	56.778	ENSAPEG00000018926	gpatch3	97	56.582	Amphiprion_percula
ENSSSCG00000003564	GPATCH3	94	52.993	ENSATEG00000023759	gpatch3	97	54.706	Anabas_testudineus
ENSSSCG00000003564	GPATCH3	73	71.637	ENSAPLG00000010745	GPATCH3	99	71.637	Anas_platyrhynchos
ENSSSCG00000003564	GPATCH3	92	59.073	ENSACAG00000016709	GPATCH3	95	58.077	Anolis_carolinensis
ENSSSCG00000003564	GPATCH3	96	86.434	ENSANAG00000035944	GPATCH3	100	86.434	Aotus_nancymaae
ENSSSCG00000003564	GPATCH3	93	55.490	ENSACLG00000012807	gpatch3	97	55.490	Astatotilapia_calliptera
ENSSSCG00000003564	GPATCH3	92	55.152	ENSAMXG00000034582	gpatch3	96	55.152	Astyanax_mexicanus
ENSSSCG00000003564	GPATCH3	97	87.692	ENSBTAG00000014849	GPATCH3	100	87.692	Bos_taurus
ENSSSCG00000003564	GPATCH3	93	36.723	WBGene00019467	K07B1.7	95	36.723	Caenorhabditis_elegans
ENSSSCG00000003564	GPATCH3	97	85.872	ENSCJAG00000010000	GPATCH3	99	85.417	Callithrix_jacchus
ENSSSCG00000003564	GPATCH3	97	89.808	ENSCAFG00000012265	GPATCH3	100	90.000	Canis_familiaris
ENSSSCG00000003564	GPATCH3	97	89.808	ENSCAFG00020021640	GPATCH3	100	90.000	Canis_lupus_dingo
ENSSSCG00000003564	GPATCH3	97	87.692	ENSCHIG00000024245	GPATCH3	98	87.692	Capra_hircus
ENSSSCG00000003564	GPATCH3	97	89.556	ENSTSYG00000011753	GPATCH3	100	88.762	Carlito_syrichta
ENSSSCG00000003564	GPATCH3	70	85.802	ENSCAPG00000007313	GPATCH3	100	84.524	Cavia_aperea
ENSSSCG00000003564	GPATCH3	95	86.560	ENSCPOG00000010404	GPATCH3	100	84.190	Cavia_porcellus
ENSSSCG00000003564	GPATCH3	95	85.049	ENSCCAG00000030482	GPATCH3	100	84.884	Cebus_capucinus
ENSSSCG00000003564	GPATCH3	97	84.701	ENSCATG00000033598	GPATCH3	100	83.810	Cercocebus_atys
ENSSSCG00000003564	GPATCH3	97	84.479	ENSCLAG00000012064	GPATCH3	100	84.231	Chinchilla_lanigera
ENSSSCG00000003564	GPATCH3	92	69.746	ENSCPBG00000024968	GPATCH3	98	65.511	Chrysemys_picta_bellii
ENSSSCG00000003564	GPATCH3	99	85.435	ENSCANG00000036795	GPATCH3	100	86.476	Colobus_angolensis_palliatus
ENSSSCG00000003564	GPATCH3	93	87.731	ENSCGRG00001002930	Gpatch3	100	82.692	Cricetulus_griseus_chok1gshd
ENSSSCG00000003564	GPATCH3	93	87.731	ENSCGRG00000004699	Gpatch3	100	82.692	Cricetulus_griseus_crigri
ENSSSCG00000003564	GPATCH3	93	56.286	ENSCSEG00000005277	gpatch3	96	56.582	Cynoglossus_semilaevis
ENSSSCG00000003564	GPATCH3	93	55.837	ENSCVAG00000000827	gpatch3	97	56.420	Cyprinodon_variegatus
ENSSSCG00000003564	GPATCH3	88	69.863	ENSDARG00000052747	gpatch3	66	70.370	Danio_rerio
ENSSSCG00000003564	GPATCH3	97	85.714	ENSDNOG00000016999	GPATCH3	100	86.476	Dasypus_novemcinctus
ENSSSCG00000003564	GPATCH3	93	44.828	ENSEBUG00000013911	gpatch3	91	44.821	Eptatretus_burgeri
ENSSSCG00000003564	GPATCH3	97	89.808	ENSEASG00005008636	GPATCH3	100	89.808	Equus_asinus_asinus
ENSSSCG00000003564	GPATCH3	97	89.808	ENSECAG00000007653	GPATCH3	100	89.808	Equus_caballus
ENSSSCG00000003564	GPATCH3	94	57.432	ENSELUG00000000963	gpatch3	97	56.461	Esox_lucius
ENSSSCG00000003564	GPATCH3	97	89.038	ENSFCAG00000012819	GPATCH3	100	89.038	Felis_catus
ENSSSCG00000003564	GPATCH3	75	71.470	ENSFALG00000000319	GPATCH3	95	71.470	Ficedula_albicollis
ENSSSCG00000003564	GPATCH3	97	83.370	ENSFDAG00000016270	GPATCH3	100	82.667	Fukomys_damarensis
ENSSSCG00000003564	GPATCH3	93	55.859	ENSFHEG00000015264	gpatch3	97	56.836	Fundulus_heteroclitus
ENSSSCG00000003564	GPATCH3	92	56.238	ENSGMOG00000000991	gpatch3	97	56.436	Gadus_morhua
ENSSSCG00000003564	GPATCH3	92	66.125	ENSGALG00000000881	GPATCH3	96	63.189	Gallus_gallus
ENSSSCG00000003564	GPATCH3	92	55.446	ENSGAFG00000002531	gpatch3	93	61.159	Gambusia_affinis
ENSSSCG00000003564	GPATCH3	93	55.945	ENSGACG00000007199	gpatch3	97	56.725	Gasterosteus_aculeatus
ENSSSCG00000003564	GPATCH3	92	70.276	ENSGAGG00000023286	GPATCH3	99	65.769	Gopherus_agassizii
ENSSSCG00000003564	GPATCH3	99	85.870	ENSGGOG00000015305	GPATCH3	100	86.667	Gorilla_gorilla
ENSSSCG00000003564	GPATCH3	93	55.490	ENSHBUG00000020513	gpatch3	94	62.899	Haplochromis_burtoni
ENSSSCG00000003564	GPATCH3	97	83.149	ENSHGLG00000012492	GPATCH3	100	82.095	Heterocephalus_glaber_female
ENSSSCG00000003564	GPATCH3	97	83.149	ENSHGLG00100016909	GPATCH3	100	82.095	Heterocephalus_glaber_male
ENSSSCG00000003564	GPATCH3	91	58.333	ENSHCOG00000005739	gpatch3	97	57.738	Hippocampus_comes
ENSSSCG00000003564	GPATCH3	92	54.739	ENSIPUG00000007697	gpatch3	99	64.968	Ictalurus_punctatus
ENSSSCG00000003564	GPATCH3	93	89.607	ENSSTOG00000015220	GPATCH3	100	85.524	Ictidomys_tridecemlineatus
ENSSSCG00000003564	GPATCH3	93	87.731	ENSJJAG00000003292	Gpatch3	100	81.679	Jaculus_jaculus
ENSSSCG00000003564	GPATCH3	93	56.589	ENSKMAG00000020717	gpatch3	98	56.430	Kryptolebias_marmoratus
ENSSSCG00000003564	GPATCH3	93	53.876	ENSLBEG00000007046	gpatch3	95	54.492	Labrus_bergylta
ENSSSCG00000003564	GPATCH3	87	74.439	ENSLACG00000011400	GPATCH3	79	74.439	Latimeria_chalumnae
ENSSSCG00000003564	GPATCH3	92	57.255	ENSLOCG00000003858	gpatch3	97	57.396	Lepisosteus_oculatus
ENSSSCG00000003564	GPATCH3	99	85.621	ENSLAFG00000016691	GPATCH3	100	85.878	Loxodonta_africana
ENSSSCG00000003564	GPATCH3	97	87.429	ENSMFAG00000030918	GPATCH3	100	87.429	Macaca_fascicularis
ENSSSCG00000003564	GPATCH3	97	87.619	ENSMMUG00000018723	GPATCH3	100	87.619	Macaca_mulatta
ENSSSCG00000003564	GPATCH3	84	76.703	ENSMNEG00000033889	GPATCH3	94	76.703	Macaca_nemestrina
ENSSSCG00000003564	GPATCH3	99	86.522	ENSMLEG00000033364	GPATCH3	100	87.048	Mandrillus_leucophaeus
ENSSSCG00000003564	GPATCH3	93	58.465	ENSMAMG00000023975	gpatch3	97	58.465	Mastacembelus_armatus
ENSSSCG00000003564	GPATCH3	93	55.490	ENSMZEG00005019731	gpatch3	97	55.490	Maylandia_zebra
ENSSSCG00000003564	GPATCH3	77	68.802	ENSMGAG00000000813	GPATCH3	98	68.802	Meleagris_gallopavo
ENSSSCG00000003564	GPATCH3	96	85.682	ENSMAUG00000002005	Gpatch3	100	82.143	Mesocricetus_auratus
ENSSSCG00000003564	GPATCH3	99	87.391	ENSMICG00000015656	GPATCH3	100	88.190	Microcebus_murinus
ENSSSCG00000003564	GPATCH3	96	84.270	ENSMOCG00000022375	Gpatch3	100	80.871	Microtus_ochrogaster
ENSSSCG00000003564	GPATCH3	71	63.746	ENSMMOG00000008963	gpatch3	93	63.746	Mola_mola
ENSSSCG00000003564	GPATCH3	99	76.139	ENSMODG00000014417	GPATCH3	100	74.440	Monodelphis_domestica
ENSSSCG00000003564	GPATCH3	93	53.346	ENSMALG00000007586	gpatch3	97	54.545	Monopterus_albus
ENSSSCG00000003564	GPATCH3	95	86.230	MGP_CAROLIEiJ_G0026594	Gpatch3	100	82.476	Mus_caroli
ENSSSCG00000003564	GPATCH3	95	85.360	ENSMUSG00000028850	Gpatch3	100	81.559	Mus_musculus
ENSSSCG00000003564	GPATCH3	95	85.779	MGP_PahariEiJ_G0028927	Gpatch3	100	82.917	Mus_pahari
ENSSSCG00000003564	GPATCH3	95	85.553	MGP_SPRETEiJ_G0027575	Gpatch3	99	87.463	Mus_spretus
ENSSSCG00000003564	GPATCH3	97	89.231	ENSMPUG00000015665	GPATCH3	100	89.423	Mustela_putorius_furo
ENSSSCG00000003564	GPATCH3	97	88.269	ENSMLUG00000023528	GPATCH3	100	88.269	Myotis_lucifugus
ENSSSCG00000003564	GPATCH3	97	83.778	ENSNGAG00000006821	Gpatch3	100	82.286	Nannospalax_galili
ENSSSCG00000003564	GPATCH3	93	52.400	ENSNBRG00000000365	gpatch3	97	52.400	Neolamprologus_brichardi
ENSSSCG00000003564	GPATCH3	93	90.278	ENSNLEG00000009387	GPATCH3	99	84.231	Nomascus_leucogenys
ENSSSCG00000003564	GPATCH3	91	81.967	ENSMEUG00000003236	GPATCH3	98	76.879	Notamacropus_eugenii
ENSSSCG00000003564	GPATCH3	97	84.231	ENSOPRG00000016429	GPATCH3	100	84.808	Ochotona_princeps
ENSSSCG00000003564	GPATCH3	99	83.298	ENSODEG00000003292	GPATCH3	100	84.453	Octodon_degus
ENSSSCG00000003564	GPATCH3	93	57.030	ENSONIG00000006771	gpatch3	97	57.030	Oreochromis_niloticus
ENSSSCG00000003564	GPATCH3	87	78.765	ENSOCUG00000006411	GPATCH3	100	79.789	Oryctolagus_cuniculus
ENSSSCG00000003564	GPATCH3	87	59.759	ENSORLG00000004435	gpatch3	96	56.238	Oryzias_latipes
ENSSSCG00000003564	GPATCH3	93	56.167	ENSORLG00020022609	gpatch3	97	55.233	Oryzias_latipes_hni
ENSSSCG00000003564	GPATCH3	93	58.389	ENSORLG00015008692	gpatch3	92	62.145	Oryzias_latipes_hsok
ENSSSCG00000003564	GPATCH3	94	57.432	ENSOMEG00000010991	gpatch3	97	56.687	Oryzias_melastigma
ENSSSCG00000003564	GPATCH3	97	86.860	ENSOGAG00000011647	GPATCH3	100	86.372	Otolemur_garnettii
ENSSSCG00000003564	GPATCH3	97	87.308	ENSOARG00000003955	GPATCH3	98	87.308	Ovis_aries
ENSSSCG00000003564	GPATCH3	99	85.870	ENSPPAG00000032902	GPATCH3	100	86.667	Pan_paniscus
ENSSSCG00000003564	GPATCH3	97	89.808	ENSPPRG00000024244	GPATCH3	100	89.808	Panthera_pardus
ENSSSCG00000003564	GPATCH3	97	88.615	ENSPTIG00000014693	GPATCH3	100	88.615	Panthera_tigris_altaica
ENSSSCG00000003564	GPATCH3	99	85.870	ENSPTRG00000023419	GPATCH3	100	86.667	Pan_troglodytes
ENSSSCG00000003564	GPATCH3	99	86.522	ENSPANG00000007984	GPATCH3	100	87.238	Papio_anubis
ENSSSCG00000003564	GPATCH3	93	58.498	ENSPKIG00000020073	gpatch3	96	58.350	Paramormyrops_kingsleyae
ENSSSCG00000003564	GPATCH3	88	70.460	ENSPSIG00000017160	GPATCH3	99	70.976	Pelodiscus_sinensis
ENSSSCG00000003564	GPATCH3	93	53.502	ENSPMGG00000001703	gpatch3	97	53.502	Periophthalmus_magnuspinnatus
ENSSSCG00000003564	GPATCH3	95	86.395	ENSPEMG00000020632	Gpatch3	100	81.887	Peromyscus_maniculatus_bairdii
ENSSSCG00000003564	GPATCH3	95	78.876	ENSPCIG00000012681	GPATCH3	97	76.255	Phascolarctos_cinereus
ENSSSCG00000003564	GPATCH3	93	55.952	ENSPFOG00000009928	gpatch3	97	56.944	Poecilia_formosa
ENSSSCG00000003564	GPATCH3	93	54.845	ENSPLAG00000023784	gpatch3	97	56.008	Poecilia_latipinna
ENSSSCG00000003564	GPATCH3	93	55.837	ENSPMEG00000010268	gpatch3	97	56.809	Poecilia_mexicana
ENSSSCG00000003564	GPATCH3	92	57.442	ENSPREG00000008873	gpatch3	97	56.175	Poecilia_reticulata
ENSSSCG00000003564	GPATCH3	96	86.577	ENSPPYG00000001675	GPATCH3	100	87.048	Pongo_abelii
ENSSSCG00000003564	GPATCH3	97	86.475	ENSPCAG00000008286	GPATCH3	100	83.810	Procavia_capensis
ENSSSCG00000003564	GPATCH3	99	86.522	ENSPCOG00000020145	GPATCH3	100	88.000	Propithecus_coquereli
ENSSSCG00000003564	GPATCH3	97	82.150	ENSPVAG00000017282	GPATCH3	100	82.150	Pteropus_vampyrus
ENSSSCG00000003564	GPATCH3	93	55.490	ENSPNYG00000005172	gpatch3	99	55.490	Pundamilia_nyererei
ENSSSCG00000003564	GPATCH3	92	56.783	ENSPNAG00000018501	gpatch3	97	56.008	Pygocentrus_nattereri
ENSSSCG00000003564	GPATCH3	95	86.005	ENSRNOG00000007097	Gpatch3	100	82.409	Rattus_norvegicus
ENSSSCG00000003564	GPATCH3	99	85.217	ENSRBIG00000005853	GPATCH3	100	86.667	Rhinopithecus_bieti
ENSSSCG00000003564	GPATCH3	99	85.435	ENSRROG00000038382	GPATCH3	100	86.857	Rhinopithecus_roxellana
ENSSSCG00000003564	GPATCH3	95	86.168	ENSSBOG00000019680	GPATCH3	99	90.113	Saimiri_boliviensis_boliviensis
ENSSSCG00000003564	GPATCH3	91	81.754	ENSSHAG00000014268	GPATCH3	99	75.094	Sarcophilus_harrisii
ENSSSCG00000003564	GPATCH3	92	55.642	ENSSFOG00015009602	gpatch3	98	55.642	Scleropages_formosus
ENSSSCG00000003564	GPATCH3	93	56.385	ENSSMAG00000002067	gpatch3	97	55.992	Scophthalmus_maximus
ENSSSCG00000003564	GPATCH3	93	55.556	ENSSDUG00000017071	gpatch3	97	54.971	Seriola_dumerili
ENSSSCG00000003564	GPATCH3	93	55.361	ENSSLDG00000016549	gpatch3	97	54.776	Seriola_lalandi_dorsalis
ENSSSCG00000003564	GPATCH3	97	59.656	ENSSPUG00000018299	GPATCH3	100	59.656	Sphenodon_punctatus
ENSSSCG00000003564	GPATCH3	92	57.763	ENSSPAG00000013046	gpatch3	97	56.275	Stegastes_partitus
ENSSSCG00000003564	GPATCH3	86	62.592	ENSTGUG00000000986	GPATCH3	100	65.757	Taeniopygia_guttata
ENSSSCG00000003564	GPATCH3	93	52.571	ENSTRUG00000013294	gpatch3	98	52.571	Takifugu_rubripes
ENSSSCG00000003564	GPATCH3	93	55.050	ENSTNIG00000009657	gpatch3	99	55.050	Tetraodon_nigroviridis
ENSSSCG00000003564	GPATCH3	82	90.116	ENSTBEG00000002042	GPATCH3	100	73.040	Tupaia_belangeri
ENSSSCG00000003564	GPATCH3	95	82.283	ENSTTRG00000016677	GPATCH3	99	82.115	Tursiops_truncatus
ENSSSCG00000003564	GPATCH3	97	88.889	ENSUAMG00000026235	GPATCH3	100	88.889	Ursus_americanus
ENSSSCG00000003564	GPATCH3	97	88.889	ENSUMAG00000011894	GPATCH3	100	88.889	Ursus_maritimus
ENSSSCG00000003564	GPATCH3	97	90.000	ENSVVUG00000012041	GPATCH3	100	90.192	Vulpes_vulpes
ENSSSCG00000003564	GPATCH3	94	50.984	ENSXETG00000030345	GPATCH3	99	52.727	Xenopus_tropicalis
ENSSSCG00000003564	GPATCH3	93	52.918	ENSXCOG00000016129	gpatch3	97	52.716	Xiphophorus_couchianus
ENSSSCG00000003564	GPATCH3	94	55.481	ENSXMAG00000010749	gpatch3	97	55.882	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function