EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000003589 (Gene tree)
Gene ID: 100515782
Gene Symbol: SRSF4
Alias: SFRS4|SRP75
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 240358 bases
Position: chr6:85891364-86131721
Accession: 768101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000055934	RRM_1	PF00076.22	3.9e-31	1	2
ENSSSCP00000055934	RRM_1	PF00076.22	3.9e-31	2	2
ENSSSCP00000003892	RRM_1	PF00076.22	4.7e-13	1	1
ENSSSCP00000059217	RRM_1	PF00076.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003983	SRSF4-202	2582	XM_013995821	ENSSSCP00000003892	436 (aa)	XP_013851275	F6QB00
ENSSSCT00000063908	SRSF4-203	2707	XM_021093612	ENSSSCP00000059217	436 (aa)	XP_020949271	F6QB00
ENSSSCT00000056195	SRSF4-201	1446	-	ENSSSCP00000055934	481 (aa)	-	A0A287BH67
ENSSSCT00000003984	SRSF4-205	6614	XM_021093341	ENSSSCP00000003893	375 (aa)	XP_020949000	F1STL4
ENSSSCT00000053668	SRSF4-204	1115	-	ENSSSCP00000055925	341 (aa)	-	A0A287BIN2

Gene Model

Click here to download ENSSSCG00000003589's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00061	Fatty acid biosynthesis	KEGG
ssc00062	Fatty acid elongation	KEGG
ssc01100	Metabolic pathways	KEGG
ssc01212	Fatty acid metabolism	KEGG
ssc03040	Spliceosome	KEGG
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000003589	SRSF4	52	41.406	ENSSSCG00000017626	-	66	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003589	SRSF4	94	89.783	ENSG00000116350	SRSF4	96	90.756	Homo_sapiens
ENSSSCG00000003589	SRSF4	94	87.800	ENSAMEG00000000594	SRSF4	66	95.719	Ailuropoda_melanoleuca
ENSSSCG00000003589	SRSF4	88	85.880	ENSANAG00000037134	SRSF4	84	100.000	Aotus_nancymaae
ENSSSCG00000003589	SRSF4	94	91.558	ENSBTAG00000013309	SRSF4	66	94.154	Bos_taurus
ENSSSCG00000003589	SRSF4	94	89.588	ENSCJAG00000047192	SRSF4	96	89.792	Callithrix_jacchus
ENSSSCG00000003589	SRSF4	86	89.176	ENSCAFG00000011669	SRSF4	94	87.277	Canis_familiaris
ENSSSCG00000003589	SRSF4	86	89.598	ENSCAFG00020023963	SRSF4	92	90.045	Canis_lupus_dingo
ENSSSCG00000003589	SRSF4	94	86.404	ENSCHIG00000022096	SRSF4	83	89.744	Capra_hircus
ENSSSCG00000003589	SRSF4	94	90.022	ENSTSYG00000007903	SRSF4	96	88.866	Carlito_syrichta
ENSSSCG00000003589	SRSF4	94	90.810	ENSCATG00000031440	SRSF4	96	90.546	Cercocebus_atys
ENSSSCG00000003589	SRSF4	94	91.247	ENSCSAG00000001022	SRSF4	96	90.966	Chlorocebus_sabaeus
ENSSSCG00000003589	SRSF4	86	80.998	ENSCHOG00000013858	SRSF4	96	80.866	Choloepus_hoffmanni
ENSSSCG00000003589	SRSF4	94	91.247	ENSCANG00000028667	SRSF4	96	90.966	Colobus_angolensis_palliatus
ENSSSCG00000003589	SRSF4	94	83.442	ENSCGRG00001021115	Srsf4	67	90.303	Cricetulus_griseus_chok1gshd
ENSSSCG00000003589	SRSF4	86	81.087	ENSCGRG00000014137	Srsf4	64	89.116	Cricetulus_griseus_crigri
ENSSSCG00000003589	SRSF4	94	83.191	ENSDNOG00000047961	SRSF4	65	90.060	Dasypus_novemcinctus
ENSSSCG00000003589	SRSF4	94	92.857	ENSEASG00005010168	SRSF4	96	92.931	Equus_asinus_asinus
ENSSSCG00000003589	SRSF4	94	92.857	ENSECAG00000021350	SRSF4	96	92.931	Equus_caballus
ENSSSCG00000003589	SRSF4	94	86.374	ENSEEUG00000008479	SRSF4	82	100.000	Erinaceus_europaeus
ENSSSCG00000003589	SRSF4	94	91.009	ENSFCAG00000027821	SRSF4	96	91.789	Felis_catus
ENSSSCG00000003589	SRSF4	50	62.602	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
ENSSSCG00000003589	SRSF4	94	91.028	ENSGGOG00000002444	SRSF4	96	90.756	Gorilla_gorilla
ENSSSCG00000003589	SRSF4	63	89.394	ENSHCOG00000012540	srsf4	68	82.065	Hippocampus_comes
ENSSSCG00000003589	SRSF4	68	93.694	ENSSTOG00000015908	SRSF4	67	93.333	Ictidomys_tridecemlineatus
ENSSSCG00000003589	SRSF4	97	91.582	ENSLAFG00000002575	SRSF4	58	88.591	Loxodonta_africana
ENSSSCG00000003589	SRSF4	94	91.247	ENSMFAG00000041784	SRSF4	96	90.966	Macaca_fascicularis
ENSSSCG00000003589	SRSF4	86	90.499	ENSMMUG00000007110	SRSF4	90	90.227	Macaca_mulatta
ENSSSCG00000003589	SRSF4	94	91.247	ENSMNEG00000034931	SRSF4	96	90.966	Macaca_nemestrina
ENSSSCG00000003589	SRSF4	94	91.028	ENSMLEG00000031619	SRSF4	96	90.756	Mandrillus_leucophaeus
ENSSSCG00000003589	SRSF4	94	92.174	ENSMICG00000043567	SRSF4	96	91.232	Microcebus_murinus
ENSSSCG00000003589	SRSF4	94	81.699	ENSMOCG00000013319	Srsf4	67	90.000	Microtus_ochrogaster
ENSSSCG00000003589	SRSF4	53	69.170	ENSMMOG00000013653	srsf4	62	81.356	Mola_mola
ENSSSCG00000003589	SRSF4	62	90.196	ENSMODG00000011052	SRSF4	55	99.435	Monodelphis_domestica
ENSSSCG00000003589	SRSF4	94	81.917	MGP_CAROLIEiJ_G0026555	Srsf4	96	76.681	Mus_caroli
ENSSSCG00000003589	SRSF4	94	83.224	ENSMUSG00000028911	Srsf4	96	80.042	Mus_musculus
ENSSSCG00000003589	SRSF4	62	92.434	MGP_PahariEiJ_G0028887	Srsf4	67	88.991	Mus_pahari
ENSSSCG00000003589	SRSF4	94	82.135	MGP_SPRETEiJ_G0027535	Srsf4	96	80.042	Mus_spretus
ENSSSCG00000003589	SRSF4	94	88.553	ENSMPUG00000015470	SRSF4	96	87.759	Mustela_putorius_furo
ENSSSCG00000003589	SRSF4	67	92.424	ENSMLUG00000014770	SRSF4	65	93.272	Myotis_lucifugus
ENSSSCG00000003589	SRSF4	96	85.043	ENSNGAG00000012225	Srsf4	68	91.104	Nannospalax_galili
ENSSSCG00000003589	SRSF4	94	90.810	ENSNLEG00000009916	SRSF4	96	90.546	Nomascus_leucogenys
ENSSSCG00000003589	SRSF4	94	82.937	ENSOCUG00000001837	SRSF4	67	90.991	Oryctolagus_cuniculus
ENSSSCG00000003589	SRSF4	94	90.175	ENSOGAG00000015515	SRSF4	96	89.937	Otolemur_garnettii
ENSSSCG00000003589	SRSF4	94	91.028	ENSPPAG00000028357	SRSF4	96	90.756	Pan_paniscus
ENSSSCG00000003589	SRSF4	94	91.009	ENSPPRG00000016248	SRSF4	96	91.789	Panthera_pardus
ENSSSCG00000003589	SRSF4	94	91.028	ENSPTRG00000000445	SRSF4	96	90.756	Pan_troglodytes
ENSSSCG00000003589	SRSF4	94	91.028	ENSPANG00000021937	SRSF4	96	90.756	Papio_anubis
ENSSSCG00000003589	SRSF4	89	79.587	ENSPEMG00000003365	Srsf4	96	74.603	Peromyscus_maniculatus_bairdii
ENSSSCG00000003589	SRSF4	94	90.591	ENSPPYG00000001629	SRSF4	96	90.336	Pongo_abelii
ENSSSCG00000003589	SRSF4	93	85.808	ENSPCAG00000009879	SRSF4	66	90.303	Procavia_capensis
ENSSSCG00000003589	SRSF4	94	89.956	ENSPCOG00000027341	SRSF4	96	90.021	Propithecus_coquereli
ENSSSCG00000003589	SRSF4	58	100.000	ENSPVAG00000012500	SRSF4	68	73.554	Pteropus_vampyrus
ENSSSCG00000003589	SRSF4	61	93.023	ENSRNOG00000010007	Srsf4	67	86.196	Rattus_norvegicus
ENSSSCG00000003589	SRSF4	94	91.247	ENSRBIG00000035789	SRSF4	96	90.966	Rhinopithecus_bieti
ENSSSCG00000003589	SRSF4	94	91.247	ENSRROG00000029463	SRSF4	96	90.966	Rhinopithecus_roxellana
ENSSSCG00000003589	SRSF4	94	89.588	ENSSBOG00000027098	SRSF4	96	90.417	Saimiri_boliviensis_boliviensis
ENSSSCG00000003589	SRSF4	51	86.463	ENSSHAG00000012407	SRSF4	50	97.260	Sarcophilus_harrisii
ENSSSCG00000003589	SRSF4	53	73.518	ENSSPAG00000014538	srsf4	83	85.950	Stegastes_partitus
ENSSSCG00000003589	SRSF4	94	88.816	ENSTTRG00000002572	SRSF4	66	91.385	Tursiops_truncatus
ENSSSCG00000003589	SRSF4	94	89.520	ENSUAMG00000006106	SRSF4	96	89.937	Ursus_americanus
ENSSSCG00000003589	SRSF4	86	89.835	ENSVVUG00000012690	SRSF4	94	89.686	Vulpes_vulpes