EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000003591 (Gene tree)
Gene ID
100517038
Gene Symbol
PUM1
Alias
KIAA0099|PUMH1
Full Name
pumilio RNA binding family member 1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
140141 bases
Position
chr6:87547320-87687460
Accession
100517038
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000003895PUFPF00806.191.2e-7118
ENSSSCP00000003895PUFPF00806.191.2e-7128
ENSSSCP00000003895PUFPF00806.191.2e-7138
ENSSSCP00000003895PUFPF00806.191.2e-7148
ENSSSCP00000003895PUFPF00806.191.2e-7158
ENSSSCP00000003895PUFPF00806.191.2e-7168
ENSSSCP00000003895PUFPF00806.191.2e-7178
ENSSSCP00000003895PUFPF00806.191.2e-7188
ENSSSCP00000034145PUFPF00806.194.1e-7118
ENSSSCP00000034145PUFPF00806.194.1e-7128
ENSSSCP00000034145PUFPF00806.194.1e-7138
ENSSSCP00000034145PUFPF00806.194.1e-7148
ENSSSCP00000034145PUFPF00806.194.1e-7158
ENSSSCP00000034145PUFPF00806.194.1e-7168
ENSSSCP00000034145PUFPF00806.194.1e-7178
ENSSSCP00000034145PUFPF00806.194.1e-7188
ENSSSCP00000055326PUFPF00806.194.2e-7118
ENSSSCP00000055326PUFPF00806.194.2e-7128
ENSSSCP00000055326PUFPF00806.194.2e-7138
ENSSSCP00000055326PUFPF00806.194.2e-7148
ENSSSCP00000055326PUFPF00806.194.2e-7158
ENSSSCP00000055326PUFPF00806.194.2e-7168
ENSSSCP00000055326PUFPF00806.194.2e-7178
ENSSSCP00000055326PUFPF00806.194.2e-7188
ENSSSCP00000022588PUFPF00806.194.7e-7118
ENSSSCP00000022588PUFPF00806.194.7e-7128
ENSSSCP00000022588PUFPF00806.194.7e-7138
ENSSSCP00000022588PUFPF00806.194.7e-7148
ENSSSCP00000022588PUFPF00806.194.7e-7158
ENSSSCP00000022588PUFPF00806.194.7e-7168
ENSSSCP00000022588PUFPF00806.194.7e-7178
ENSSSCP00000022588PUFPF00806.194.7e-7188
ENSSSCP00000041520PUFPF00806.198.9e-7118
ENSSSCP00000041520PUFPF00806.198.9e-7128
ENSSSCP00000041520PUFPF00806.198.9e-7138
ENSSSCP00000041520PUFPF00806.198.9e-7148
ENSSSCP00000041520PUFPF00806.198.9e-7158
ENSSSCP00000041520PUFPF00806.198.9e-7168
ENSSSCP00000041520PUFPF00806.198.9e-7178
ENSSSCP00000041520PUFPF00806.198.9e-7188
ENSSSCP00000055636PUFPF00806.198.9e-7118
ENSSSCP00000055636PUFPF00806.198.9e-7128
ENSSSCP00000055636PUFPF00806.198.9e-7138
ENSSSCP00000055636PUFPF00806.198.9e-7148
ENSSSCP00000055636PUFPF00806.198.9e-7158
ENSSSCP00000055636PUFPF00806.198.9e-7168
ENSSSCP00000055636PUFPF00806.198.9e-7178
ENSSSCP00000055636PUFPF00806.198.9e-7188
ENSSSCP00000037196PUFPF00806.198.2e-6217
ENSSSCP00000037196PUFPF00806.198.2e-6227
ENSSSCP00000037196PUFPF00806.198.2e-6237
ENSSSCP00000037196PUFPF00806.198.2e-6247
ENSSSCP00000037196PUFPF00806.198.2e-6257
ENSSSCP00000037196PUFPF00806.198.2e-6267
ENSSSCP00000037196PUFPF00806.198.2e-6277
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000048874PUM1-2074098XM_021095738ENSSSCP000000341451218 (aa)XP_020951397A0A286ZRN9
ENSSSCT00000049915PUM1-2024733-ENSSSCP000000556361189 (aa)-A0A287BHU5
ENSSSCT00000003986PUM1-2043583XM_021095760ENSSSCP000000038951041 (aa)XP_020951419F1STL2
ENSSSCT00000025839PUM1-2053797XM_021095749ENSSSCP000000225881109 (aa)XP_020951408I3LEU9
ENSSSCT00000057746PUM1-2033822XM_013999086ENSSSCP000000553261092 (aa)XP_013854540A0A287BGR2
ENSSSCT00000064370PUM1-2014500XM_021095734ENSSSCP000000415201189 (aa)XP_020951393A0A287BHU5
ENSSSCT00000043104PUM1-2063879-ENSSSCP000000371961144 (aa)-A0A286ZZS5
Gene Model
Click here to download ENSSSCG00000003591's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003591's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000003591PUM18687.588ENSSSCG00000008600PUM210089.563
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000003591PUM1100100.000ENSG00000134644PUM1100100.000Homo_sapiens
ENSSSCG00000003591PUM19589.537ENSAPOG00000021632pum110091.525Acanthochromis_polyacanthus
ENSSSCG00000003591PUM1100100.000ENSAMEG00000017656PUM19799.664Ailuropoda_melanoleuca
ENSSSCG00000003591PUM19589.336ENSACIG00000021013pum110088.934Amphilophus_citrinellus
ENSSSCG00000003591PUM19589.537ENSAOCG00000003944pum110091.525Amphiprion_ocellaris
ENSSSCG00000003591PUM19589.537ENSAPEG00000014550pum110091.525Amphiprion_percula
ENSSSCG00000003591PUM110092.048ENSATEG00000016004pum110091.525Anabas_testudineus
ENSSSCG00000003591PUM110098.792ENSAPLG00000009351PUM110098.178Anas_platyrhynchos
ENSSSCG00000003591PUM110099.034ENSACAG00000000682PUM19897.773Anolis_carolinensis
ENSSSCG00000003591PUM1100100.000ENSANAG00000027865PUM1100100.000Aotus_nancymaae
ENSSSCG00000003591PUM18589.336ENSACLG00000019354pum110088.934Astatotilapia_calliptera
ENSSSCG00000003591PUM19492.083ENSAMXG00000020607pum19293.237Astyanax_mexicanus
ENSSSCG00000003591PUM1100100.000ENSBTAG00000018979PUM1100100.000Bos_taurus
ENSSSCG00000003591PUM1100100.000ENSCJAG00000006035PUM1100100.000Callithrix_jacchus
ENSSSCG00000003591PUM1100100.000ENSCAFG00000011205PUM110099.393Canis_familiaris
ENSSSCG00000003591PUM190100.000ENSCAFG00020024616PUM19999.393Canis_lupus_dingo
ENSSSCG00000003591PUM1100100.000ENSCHIG00000012952PUM110099.797Capra_hircus
ENSSSCG00000003591PUM110099.758ENSTSYG00000008868PUM110099.411Carlito_syrichta
ENSSSCG00000003591PUM110099.583ENSCPOG00000031613PUM110099.306Cavia_porcellus
ENSSSCG00000003591PUM1100100.000ENSCATG00000017991PUM1100100.000Cercocebus_atys
ENSSSCG00000003591PUM110099.583ENSCLAG00000007662PUM110099.327Chinchilla_lanigera
ENSSSCG00000003591PUM1100100.000ENSCSAG00000001028PUM110099.190Chlorocebus_sabaeus
ENSSSCG00000003591PUM19996.547ENSCHOG00000010245PUM19396.547Choloepus_hoffmanni
ENSSSCG00000003591PUM110098.792ENSCPBG00000009288PUM110098.786Chrysemys_picta_bellii
ENSSSCG00000003591PUM1100100.000ENSCANG00000042606PUM1100100.000Colobus_angolensis_palliatus
ENSSSCG00000003591PUM110099.167ENSCGRG00001024949Pum110099.306Cricetulus_griseus_chok1gshd
ENSSSCG00000003591PUM110099.167ENSCGRG00000014197Pum110099.306Cricetulus_griseus_crigri
ENSSSCG00000003591PUM18589.697ENSCSEG00000015981pum110089.293Cynoglossus_semilaevis
ENSSSCG00000003591PUM19588.934ENSCVAG00000007043pum110088.531Cyprinodon_variegatus
ENSSSCG00000003591PUM110093.478ENSDARG00000099256pum19594.408Danio_rerio
ENSSSCG00000003591PUM1100100.000ENSDNOG00000010939PUM110099.327Dasypus_novemcinctus
ENSSSCG00000003591PUM18998.283ENSDORG00000001875Pum110098.792Dipodomys_ordii
ENSSSCG00000003591PUM18698.319ENSETEG00000004355PUM18793.951Echinops_telfairi
ENSSSCG00000003591PUM1100100.000ENSEASG00005010813PUM110099.411Equus_asinus_asinus
ENSSSCG00000003591PUM110099.583ENSECAG00000021369PUM110099.411Equus_caballus
ENSSSCG00000003591PUM182100.000ENSEEUG00000003871PUM174100.000Erinaceus_europaeus
ENSSSCG00000003591PUM19591.734ENSELUG00000002409pum110091.734Esox_lucius
ENSSSCG00000003591PUM1100100.000ENSFCAG00000010374PUM1100100.000Felis_catus
ENSSSCG00000003591PUM110099.034ENSFALG00000001214PUM19798.178Ficedula_albicollis
ENSSSCG00000003591PUM110099.583ENSFDAG00000011319PUM110099.306Fukomys_damarensis
ENSSSCG00000003591PUM19191.566ENSGMOG00000010491pum110089.135Gadus_morhua
ENSSSCG00000003591PUM110099.034ENSGALG00000042598PUM110098.381Gallus_gallus
ENSSSCG00000003591PUM19588.934ENSGAFG00000015617pum110090.361Gambusia_affinis
ENSSSCG00000003591PUM19589.336ENSGACG00000005717pum110088.934Gasterosteus_aculeatus
ENSSSCG00000003591PUM110098.792ENSGAGG00000001290PUM110098.178Gopherus_agassizii
ENSSSCG00000003591PUM1100100.000ENSGGOG00000011983PUM1100100.000Gorilla_gorilla
ENSSSCG00000003591PUM19589.336ENSHBUG00000018718pum110088.934Haplochromis_burtoni
ENSSSCG00000003591PUM110099.167ENSHGLG00000013819Pum110099.075Heterocephalus_glaber_female
ENSSSCG00000003591PUM110099.167ENSHGLG00100008621Pum110099.075Heterocephalus_glaber_male
ENSSSCG00000003591PUM18880.165ENSHCOG00000005149pum19093.370Hippocampus_comes
ENSSSCG00000003591PUM110092.512ENSIPUG00000020421pum19990.891Ictalurus_punctatus
ENSSSCG00000003591PUM1100100.000ENSSTOG00000010757PUM1100100.000Ictidomys_tridecemlineatus
ENSSSCG00000003591PUM1100100.000ENSJJAG00000000530Pum1100100.000Jaculus_jaculus
ENSSSCG00000003591PUM19588.732ENSKMAG00000003481pum110088.330Kryptolebias_marmoratus
ENSSSCG00000003591PUM110092.048ENSLBEG00000002527pum110088.508Labrus_bergylta
ENSSSCG00000003591PUM110089.206ENSLACG00000017188PUM19988.129Latimeria_chalumnae
ENSSSCG00000003591PUM110096.860ENSLOCG00000005210pum19995.344Lepisosteus_oculatus
ENSSSCG00000003591PUM110099.275ENSLAFG00000003178PUM110099.075Loxodonta_africana
ENSSSCG00000003591PUM1100100.000ENSMFAG00000010291PUM1100100.000Macaca_fascicularis
ENSSSCG00000003591PUM1100100.000ENSMMUG00000013520PUM1100100.000Macaca_mulatta
ENSSSCG00000003591PUM1100100.000ENSMNEG00000034639PUM1100100.000Macaca_nemestrina
ENSSSCG00000003591PUM1100100.000ENSMLEG00000038743PUM1100100.000Mandrillus_leucophaeus
ENSSSCG00000003591PUM110091.807ENSMAMG00000011606pum110088.531Mastacembelus_armatus
ENSSSCG00000003591PUM19589.336ENSMZEG00005005834pum110088.934Maylandia_zebra
ENSSSCG00000003591PUM110099.034ENSMGAG00000000724PUM110098.381Meleagris_gallopavo
ENSSSCG00000003591PUM110099.275ENSMAUG00000022090Pum110099.306Mesocricetus_auratus
ENSSSCG00000003591PUM19998.319ENSMICG00000012213-10096.667Microcebus_murinus
ENSSSCG00000003591PUM110099.583ENSMICG00000007713-10099.579Microcebus_murinus
ENSSSCG00000003591PUM110099.167ENSMOCG00000015463Pum110099.075Microtus_ochrogaster
ENSSSCG00000003591PUM19088.276ENSMMOG00000019817pum110091.283Mola_mola
ENSSSCG00000003591PUM110098.309ENSMODG00000017067PUM110097.901Monodelphis_domestica
ENSSSCG00000003591PUM19088.506ENSMALG00000016399pum110091.525Monopterus_albus
ENSSSCG00000003591PUM110099.167MGP_CAROLIEiJ_G0026549Pum110098.823Mus_caroli
ENSSSCG00000003591PUM110099.583ENSMUSG00000028580Pum110099.306Mus_musculus
ENSSSCG00000003591PUM110099.275MGP_PahariEiJ_G0028881Pum110099.306Mus_pahari
ENSSSCG00000003591PUM110099.583MGP_SPRETEiJ_G0027529Pum110099.306Mus_spretus
ENSSSCG00000003591PUM1100100.000ENSMPUG00000015454PUM110099.327Mustela_putorius_furo
ENSSSCG00000003591PUM1100100.000ENSMLUG00000006490PUM110099.327Myotis_lucifugus
ENSSSCG00000003591PUM110099.411ENSNGAG00000002378Pum110099.411Nannospalax_galili
ENSSSCG00000003591PUM19181.381ENSNBRG00000010689pum110083.580Neolamprologus_brichardi
ENSSSCG00000003591PUM110099.583ENSNLEG00000001151PUM110099.306Nomascus_leucogenys
ENSSSCG00000003591PUM19196.680ENSMEUG00000000976-8297.030Notamacropus_eugenii
ENSSSCG00000003591PUM18499.205ENSOPRG00000001776PUM17399.205Ochotona_princeps
ENSSSCG00000003591PUM110099.275ENSODEG00000003465PUM110099.084Octodon_degus
ENSSSCG00000003591PUM19589.537ENSONIG00000002290pum110089.135Oreochromis_niloticus
ENSSSCG00000003591PUM177100.000ENSOANG00000004902-83100.000Ornithorhynchus_anatinus
ENSSSCG00000003591PUM110099.583ENSOCUG00000008641PUM19998.991Oryctolagus_cuniculus
ENSSSCG00000003591PUM19590.543ENSORLG00000011482pum110088.531Oryzias_latipes
ENSSSCG00000003591PUM19590.744ENSORLG00020019461pum110088.732Oryzias_latipes_hni
ENSSSCG00000003591PUM19590.744ENSORLG00015011375pum110088.732Oryzias_latipes_hsok
ENSSSCG00000003591PUM19092.771ENSOMEG00000009312pum19990.799Oryzias_melastigma
ENSSSCG00000003591PUM110099.583ENSOGAG00000011063PUM110096.725Otolemur_garnettii
ENSSSCG00000003591PUM1100100.000ENSOARG00000001899PUM1100100.000Ovis_aries
ENSSSCG00000003591PUM1100100.000ENSPPAG00000044003PUM1100100.000Pan_paniscus
ENSSSCG00000003591PUM1100100.000ENSPPRG00000001370PUM1100100.000Panthera_pardus
ENSSSCG00000003591PUM1100100.000ENSPTIG00000010798PUM1100100.000Panthera_tigris_altaica
ENSSSCG00000003591PUM1100100.000ENSPTRG00000000453PUM1100100.000Pan_troglodytes
ENSSSCG00000003591PUM1100100.000ENSPANG00000016338PUM1100100.000Papio_anubis
ENSSSCG00000003591PUM18893.932ENSPKIG00000010578pum110091.296Paramormyrops_kingsleyae
ENSSSCG00000003591PUM110098.792ENSPSIG00000014118PUM110098.178Pelodiscus_sinensis
ENSSSCG00000003591PUM19179.731ENSPMGG00000005836pum110082.029Periophthalmus_magnuspinnatus
ENSSSCG00000003591PUM110099.583ENSPEMG00000010009Pum110099.306Peromyscus_maniculatus_bairdii
ENSSSCG00000003591PUM110098.309ENSPCIG00000014151PUM110098.309Phascolarctos_cinereus
ENSSSCG00000003591PUM19491.325ENSPFOG00000007289pum110088.531Poecilia_formosa
ENSSSCG00000003591PUM110091.325ENSPLAG00000007256pum110088.531Poecilia_latipinna
ENSSSCG00000003591PUM18588.934ENSPMEG00000019543pum19988.531Poecilia_mexicana
ENSSSCG00000003591PUM19588.934ENSPREG00000005195pum110088.531Poecilia_reticulata
ENSSSCG00000003591PUM1100100.000ENSPPYG00000001621PUM110099.190Pongo_abelii
ENSSSCG00000003591PUM18499.691ENSPCAG00000001979PUM17499.691Procavia_capensis
ENSSSCG00000003591PUM110099.583ENSPCOG00000004398PUM110099.579Propithecus_coquereli
ENSSSCG00000003591PUM1100100.000ENSPVAG00000005207PUM19797.477Pteropus_vampyrus
ENSSSCG00000003591PUM19589.336ENSPNYG00000009518pum110088.934Pundamilia_nyererei
ENSSSCG00000003591PUM110093.478ENSPNAG00000026728pum19593.478Pygocentrus_nattereri
ENSSSCG00000003591PUM110099.583ENSRNOG00000011709Pum110098.823Rattus_norvegicus
ENSSSCG00000003591PUM1100100.000ENSRBIG00000042521PUM1100100.000Rhinopithecus_bieti
ENSSSCG00000003591PUM1100100.000ENSRROG00000020156PUM1100100.000Rhinopithecus_roxellana
ENSSSCG00000003591PUM1100100.000ENSSBOG00000032037PUM1100100.000Saimiri_boliviensis_boliviensis
ENSSSCG00000003591PUM110098.309ENSSHAG00000010918PUM110097.817Sarcophilus_harrisii
ENSSSCG00000003591PUM110092.048ENSSMAG00000010918pum110091.525Scophthalmus_maximus
ENSSSCG00000003591PUM110092.048ENSSDUG00000009021pum110088.934Seriola_dumerili
ENSSSCG00000003591PUM19592.048ENSSLDG00000009667pum110088.934Seriola_lalandi_dorsalis
ENSSSCG00000003591PUM198100.000ENSSARG00000003055PUM191100.000Sorex_araneus
ENSSSCG00000003591PUM110099.034ENSSPUG00000006267PUM110098.178Sphenodon_punctatus
ENSSSCG00000003591PUM19589.537ENSSPAG00000016636pum110091.525Stegastes_partitus
ENSSSCG00000003591PUM110092.048ENSTRUG00000013121pum110088.934Takifugu_rubripes
ENSSSCG00000003591PUM110091.827ENSTNIG00000016983pum19988.755Tetraodon_nigroviridis
ENSSSCG00000003591PUM19095.122ENSTBEG00000013810PUM18995.122Tupaia_belangeri
ENSSSCG00000003591PUM19299.635ENSTTRG00000007436PUM19099.635Tursiops_truncatus
ENSSSCG00000003591PUM199100.000ENSUAMG00000018262-10099.171Ursus_americanus
ENSSSCG00000003591PUM110099.729ENSUMAG00000009211PUM1100100.000Ursus_maritimus
ENSSSCG00000003591PUM110099.626ENSVPAG00000005902PUM19299.876Vicugna_pacos
ENSSSCG00000003591PUM1100100.000ENSVVUG00000014631PUM1100100.000Vulpes_vulpes
ENSSSCG00000003591PUM110089.614ENSXETG00000012904pum19989.357Xenopus_tropicalis
ENSSSCG00000003591PUM19588.934ENSXMAG00000002945pum110088.531Xiphophorus_maculatus

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