EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000003667 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 54180 bases
Position: chr6:95629628-95683807
Accession: 100517163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039196	IPPT	PF01715.17	7.6e-27	1	1
ENSSSCP00000003971	IPPT	PF01715.17	3.4e-10	1	1
ENSSSCP00000003971	zf-C2H2_jaz	PF12171.8	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045812	-	5792	-	ENSSSCP00000039196	182 (aa)	-	A0A287A5Q6
ENSSSCT00000004063	-	2401	XM_003127821	ENSSSCP00000003971	224 (aa)	XP_003127869	F1SMC5

Gene Model

Click here to download ENSSSCG00000003667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003667	-	100	85.268	ENSG00000043514	TRIT1	98	82.822	Homo_sapiens
ENSSSCG00000003667	-	91	67.066	ENSAPLG00000011421	TRIT1	50	70.286	Anas_platyrhynchos
ENSSSCG00000003667	-	100	85.268	ENSANAG00000030732	TRIT1	98	83.436	Aotus_nancymaae
ENSSSCG00000003667	-	100	84.375	ENSCJAG00000002620	TRIT1	98	82.209	Callithrix_jacchus
ENSSSCG00000003667	-	95	93.023	ENSCAFG00020003875	TRIT1	83	93.023	Canis_lupus_dingo
ENSSSCG00000003667	-	95	90.116	ENSTSYG00000004363	TRIT1	98	81.595	Carlito_syrichta
ENSSSCG00000003667	-	100	81.696	ENSCAPG00000017001	TRIT1	57	81.696	Cavia_aperea
ENSSSCG00000003667	-	100	83.929	ENSCCAG00000031271	TRIT1	98	81.595	Cebus_capucinus
ENSSSCG00000003667	-	95	87.791	ENSCATG00000034344	TRIT1	96	76.471	Cercocebus_atys
ENSSSCG00000003667	-	100	84.821	ENSCSAG00000001137	TRIT1	54	84.821	Chlorocebus_sabaeus
ENSSSCG00000003667	-	87	73.711	ENSCPBG00000000908	-	90	73.711	Chrysemys_picta_bellii
ENSSSCG00000003667	-	100	83.929	ENSCANG00000043008	TRIT1	98	82.209	Colobus_angolensis_palliatus
ENSSSCG00000003667	-	72	62.346	ENSCVAG00000016675	trit1	74	62.346	Cyprinodon_variegatus
ENSSSCG00000003667	-	91	61.212	ENSDARG00000032876	trit1	50	61.212	Danio_rerio
ENSSSCG00000003667	-	93	89.941	ENSDNOG00000001994	TRIT1	52	67.509	Dasypus_novemcinctus
ENSSSCG00000003667	-	79	45.833	FBgn0043799	CG31381	51	31.474	Drosophila_melanogaster
ENSSSCG00000003667	-	100	88.393	ENSEASG00005000884	-	100	88.393	Equus_asinus_asinus
ENSSSCG00000003667	-	95	91.279	ENSFCAG00000006029	TRIT1	100	80.120	Felis_catus
ENSSSCG00000003667	-	90	59.756	ENSGAFG00000018636	trit1	51	61.176	Gambusia_affinis
ENSSSCG00000003667	-	92	79.762	ENSGAGG00000000522	TRIT1	51	73.196	Gopherus_agassizii
ENSSSCG00000003667	-	100	84.821	ENSGGOG00000010070	TRIT1	98	82.209	Gorilla_gorilla
ENSSSCG00000003667	-	91	60.606	ENSHBUG00000018999	trit1	67	61.006	Haplochromis_burtoni
ENSSSCG00000003667	-	88	77.157	ENSHGLG00100018159	-	58	77.157	Heterocephalus_glaber_male
ENSSSCG00000003667	-	81	65.986	ENSHCOG00000006755	trit1	93	53.234	Hippocampus_comes
ENSSSCG00000003667	-	100	85.268	ENSMFAG00000001316	TRIT1	98	83.436	Macaca_fascicularis
ENSSSCG00000003667	-	100	85.268	ENSMMUG00000016220	TRIT1	98	83.436	Macaca_mulatta
ENSSSCG00000003667	-	100	85.268	ENSMNEG00000023137	TRIT1	98	83.436	Macaca_nemestrina
ENSSSCG00000003667	-	99	85.520	ENSMLEG00000035296	TRIT1	96	83.750	Mandrillus_leucophaeus
ENSSSCG00000003667	-	95	89.535	ENSMICG00000016294	TRIT1	99	80.000	Microcebus_murinus
ENSSSCG00000003667	-	100	85.714	ENSNLEG00000012038	TRIT1	98	83.436	Nomascus_leucogenys
ENSSSCG00000003667	-	100	84.821	ENSPPAG00000023930	TRIT1	98	82.209	Pan_paniscus
ENSSSCG00000003667	-	95	90.698	ENSPPRG00000009680	TRIT1	100	80.723	Panthera_pardus
ENSSSCG00000003667	-	95	90.698	ENSPTIG00000021134	TRIT1	100	80.723	Panthera_tigris_altaica
ENSSSCG00000003667	-	100	84.821	ENSPTRG00000000579	TRIT1	98	82.209	Pan_troglodytes
ENSSSCG00000003667	-	100	84.821	ENSPANG00000018125	TRIT1	98	82.822	Papio_anubis
ENSSSCG00000003667	-	90	60.736	ENSPKIG00000024527	trit1	65	55.000	Paramormyrops_kingsleyae
ENSSSCG00000003667	-	70	71.094	ENSPSIG00000017073	TRIT1	55	72.781	Pelodiscus_sinensis
ENSSSCG00000003667	-	91	59.172	ENSPMAG00000008892	trit1	50	50.505	Petromyzon_marinus
ENSSSCG00000003667	-	92	60.119	ENSPLAG00000011669	trit1	50	60.119	Poecilia_latipinna
ENSSSCG00000003667	-	72	61.111	ENSPMEG00000023796	trit1	73	61.111	Poecilia_mexicana
ENSSSCG00000003667	-	100	82.589	ENSPCAG00000014680	TRIT1	61	82.589	Procavia_capensis
ENSSSCG00000003667	-	95	88.372	ENSPCOG00000014150	TRIT1	96	82.692	Propithecus_coquereli
ENSSSCG00000003667	-	89	60.494	ENSPNYG00000001003	trit1	52	60.494	Pundamilia_nyererei
ENSSSCG00000003667	-	100	83.482	ENSRBIG00000043179	TRIT1	98	82.822	Rhinopithecus_bieti
ENSSSCG00000003667	-	100	83.482	ENSRROG00000042670	TRIT1	98	82.822	Rhinopithecus_roxellana
ENSSSCG00000003667	-	100	83.036	ENSSBOG00000024417	TRIT1	98	80.368	Saimiri_boliviensis_boliviensis
ENSSSCG00000003667	-	93	78.947	ENSSHAG00000018363	TRIT1	51	70.833	Sarcophilus_harrisii
ENSSSCG00000003667	-	92	76.647	ENSSPUG00000003472	TRIT1	51	64.732	Sphenodon_punctatus
ENSSSCG00000003667	-	89	85.930	ENSUAMG00000000509	-	98	85.930	Ursus_americanus
ENSSSCG00000003667	-	71	90.000	ENSUAMG00000000522	-	52	88.172	Ursus_americanus
ENSSSCG00000003667	-	95	92.442	ENSVVUG00000005208	-	83	92.442	Vulpes_vulpes