EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000004029 (Gene tree)
Gene ID: 492277
Gene Symbol: QKI
Alias: QK3
Full Name: QKI%2C KH domain containing RNA binding
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 151293 bases
Position: chr1:4732578-4883870
Accession: 492277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000004354	KH_1	PF00013.29	4.7e-06	1	1
ENSSSCP00000051750	KH_1	PF00013.29	4.9e-06	1	1
ENSSSCP00000054388	KH_1	PF00013.29	6.7e-06	1	1
ENSSSCP00000051820	KH_1	PF00013.29	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000060412	QKI-203	1472	XM_021083643	ENSSSCP00000032493	280 (aa)	XP_020939302	A0A286ZLK1
ENSSSCT00000042383	QKI-205	2249	XM_021083654	ENSSSCP00000051820	338 (aa)	XP_020939313	A0A287B5U0
ENSSSCT00000057600	QKI-201	6936	XM_021083682	ENSSSCP00000051750	278 (aa)	XP_020939341	A0A287B5I1
ENSSSCT00000056118	QKI-202	7005	XM_021083630	ENSSSCP00000054388	333 (aa)	XP_020939289	A0A287BE46
ENSSSCT00000004455	QKI-204	1754	-	ENSSSCP00000004354	264 (aa)	-	F1SBW4

Gene Model

Click here to download ENSSSCG00000004029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000004029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000004029	QKI	59	38.308	ENSSSCG00000001490	KHDRBS2	73	38.397
ENSSSCG00000004029	QKI	77	35.019	ENSSSCG00000005941	KHDRBS3	56	37.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000004029	QKI	100	100.000	ENSG00000112531	QKI	100	100.000	Homo_sapiens
ENSSSCG00000004029	QKI	100	78.358	ENSAPOG00000002713	qki2	99	76.968	Acanthochromis_polyacanthus
ENSSSCG00000004029	QKI	97	100.000	ENSAMEG00000008459	QKI	99	96.726	Ailuropoda_melanoleuca
ENSSSCG00000004029	QKI	100	78.358	ENSAOCG00000014271	qki2	98	77.707	Amphiprion_ocellaris
ENSSSCG00000004029	QKI	100	78.358	ENSAPEG00000008210	qki2	98	77.707	Amphiprion_percula
ENSSSCG00000004029	QKI	99	81.818	ENSATEG00000022584	qkib	91	81.388	Anabas_testudineus
ENSSSCG00000004029	QKI	99	76.968	ENSATEG00000004355	qki2	99	77.389	Anabas_testudineus
ENSSSCG00000004029	QKI	97	99.222	ENSAPLG00000010080	QKI	100	96.540	Anas_platyrhynchos
ENSSSCG00000004029	QKI	97	98.833	ENSACAG00000003270	QKI	100	95.601	Anolis_carolinensis
ENSSSCG00000004029	QKI	100	97.654	ENSANAG00000029669	QKI	98	100.000	Aotus_nancymaae
ENSSSCG00000004029	QKI	99	78.113	ENSACLG00000007900	qkib	90	78.413	Astatotilapia_calliptera
ENSSSCG00000004029	QKI	100	77.612	ENSACLG00000026838	qki2	99	76.676	Astatotilapia_calliptera
ENSSSCG00000004029	QKI	100	89.811	ENSAMXG00000042623	qki2	100	88.304	Astyanax_mexicanus
ENSSSCG00000004029	QKI	100	92.164	ENSAMXG00000015808	qkib	98	90.159	Astyanax_mexicanus
ENSSSCG00000004029	QKI	100	100.000	ENSBTAG00000011593	QKI	100	97.654	Bos_taurus
ENSSSCG00000004029	QKI	100	100.000	ENSCJAG00000012368	QKI	100	97.654	Callithrix_jacchus
ENSSSCG00000004029	QKI	100	97.203	ENSCAFG00000000772	QKI	100	97.203	Canis_familiaris
ENSSSCG00000004029	QKI	97	100.000	ENSCAFG00020019085	QKI	100	96.154	Canis_lupus_dingo
ENSSSCG00000004029	QKI	100	100.000	ENSCHIG00000018891	QKI	100	97.654	Capra_hircus
ENSSSCG00000004029	QKI	97	100.000	ENSTSYG00000036757	QKI	100	95.517	Carlito_syrichta
ENSSSCG00000004029	QKI	100	97.654	ENSCCAG00000025230	QKI	100	97.654	Cebus_capucinus
ENSSSCG00000004029	QKI	100	100.000	ENSCATG00000037623	-	100	97.654	Cercocebus_atys
ENSSSCG00000004029	QKI	100	97.203	ENSCLAG00000006238	-	100	95.517	Chinchilla_lanigera
ENSSSCG00000004029	QKI	100	95.015	ENSCSAG00000012257	QKI	100	95.015	Chlorocebus_sabaeus
ENSSSCG00000004029	QKI	100	86.014	ENSCHOG00000006651	QKI	97	87.613	Choloepus_hoffmanni
ENSSSCG00000004029	QKI	100	84.751	ENSCPBG00000019817	QKI	100	84.751	Chrysemys_picta_bellii
ENSSSCG00000004029	QKI	100	100.000	ENSCANG00000000415	QKI	100	97.654	Colobus_angolensis_palliatus
ENSSSCG00000004029	QKI	100	97.654	ENSCGRG00001012114	Qk	100	97.654	Cricetulus_griseus_chok1gshd
ENSSSCG00000004029	QKI	67	100.000	ENSCGRG00000011540	Qk	99	100.000	Cricetulus_griseus_crigri
ENSSSCG00000004029	QKI	99	76.316	ENSCSEG00000013480	qki2	94	77.070	Cynoglossus_semilaevis
ENSSSCG00000004029	QKI	99	77.259	ENSCVAG00000013803	qki2	99	77.259	Cyprinodon_variegatus
ENSSSCG00000004029	QKI	99	90.566	ENSDARG00000002026	qkib	100	99.254	Danio_rerio
ENSSSCG00000004029	QKI	100	89.057	ENSDARG00000010018	qki2	99	87.025	Danio_rerio
ENSSSCG00000004029	QKI	97	100.000	ENSDORG00000008151	Qk	100	95.517	Dipodomys_ordii
ENSSSCG00000004029	QKI	100	96.503	ENSETEG00000007676	QKI	100	96.587	Echinops_telfairi
ENSSSCG00000004029	QKI	99	55.844	ENSEBUG00000013799	qki2	99	57.514	Eptatretus_burgeri
ENSSSCG00000004029	QKI	100	61.786	ENSEBUG00000009508	qki2	98	59.568	Eptatretus_burgeri
ENSSSCG00000004029	QKI	100	100.000	ENSEASG00005019724	QKI	100	97.654	Equus_asinus_asinus
ENSSSCG00000004029	QKI	100	100.000	ENSECAG00000017504	QKI	100	97.654	Equus_caballus
ENSSSCG00000004029	QKI	100	80.070	ENSEEUG00000012054	QKI	100	80.546	Erinaceus_europaeus
ENSSSCG00000004029	QKI	99	70.690	ENSELUG00000002282	qki2	100	70.245	Esox_lucius
ENSSSCG00000004029	QKI	99	88.427	ENSELUG00000016698	QKI	100	88.427	Esox_lucius
ENSSSCG00000004029	QKI	100	99.700	ENSFCAG00000019399	QKI	100	99.700	Felis_catus
ENSSSCG00000004029	QKI	97	99.222	ENSFALG00000012183	QKI	97	95.238	Ficedula_albicollis
ENSSSCG00000004029	QKI	100	97.203	ENSFDAG00000006081	QKI	100	97.270	Fukomys_damarensis
ENSSSCG00000004029	QKI	99	77.903	ENSFHEG00000009423	qki2	99	77.843	Fundulus_heteroclitus
ENSSSCG00000004029	QKI	99	72.285	ENSGMOG00000004107	qki2	99	72.543	Gadus_morhua
ENSSSCG00000004029	QKI	100	96.503	ENSGALG00000011555	QKI	100	96.481	Gallus_gallus
ENSSSCG00000004029	QKI	99	77.259	ENSGAFG00000011092	qki2	99	77.259	Gambusia_affinis
ENSSSCG00000004029	QKI	100	76.866	ENSGACG00000003206	qki2	99	76.562	Gasterosteus_aculeatus
ENSSSCG00000004029	QKI	100	99.640	ENSGAGG00000003901	QKI	100	99.399	Gopherus_agassizii
ENSSSCG00000004029	QKI	100	100.000	ENSGGOG00000000733	QKI	100	97.654	Gorilla_gorilla
ENSSSCG00000004029	QKI	99	78.868	ENSHBUG00000015851	qkib	90	79.487	Haplochromis_burtoni
ENSSSCG00000004029	QKI	100	77.985	ENSHBUG00000009123	qki2	99	77.044	Haplochromis_burtoni
ENSSSCG00000004029	QKI	100	97.203	ENSHGLG00000003074	-	100	97.270	Heterocephalus_glaber_female
ENSSSCG00000004029	QKI	100	97.203	ENSHGLG00100000339	-	100	97.270	Heterocephalus_glaber_male
ENSSSCG00000004029	QKI	99	75.802	ENSHCOG00000015404	qki2	99	75.802	Hippocampus_comes
ENSSSCG00000004029	QKI	100	90.706	ENSIPUG00000012637	qki	99	89.557	Ictalurus_punctatus
ENSSSCG00000004029	QKI	100	88.302	ENSIPUG00000014732	qki2	100	87.941	Ictalurus_punctatus
ENSSSCG00000004029	QKI	97	100.000	ENSSTOG00000009113	QKI	100	95.517	Ictidomys_tridecemlineatus
ENSSSCG00000004029	QKI	97	99.222	ENSJJAG00000022765	Qk	100	96.246	Jaculus_jaculus
ENSSSCG00000004029	QKI	100	78.358	ENSKMAG00000009024	qki2	99	77.193	Kryptolebias_marmoratus
ENSSSCG00000004029	QKI	99	66.082	ENSLBEG00000022702	qkib	90	69.401	Labrus_bergylta
ENSSSCG00000004029	QKI	100	78.358	ENSLBEG00000027428	qki2	99	77.778	Labrus_bergylta
ENSSSCG00000004029	QKI	100	94.425	ENSLACG00000015585	QKI	100	94.425	Latimeria_chalumnae
ENSSSCG00000004029	QKI	100	96.981	ENSLOCG00000016506	qki2	98	94.888	Lepisosteus_oculatus
ENSSSCG00000004029	QKI	97	100.000	ENSLAFG00000021654	QKI	100	93.182	Loxodonta_africana
ENSSSCG00000004029	QKI	100	100.000	ENSMFAG00000044069	-	100	100.000	Macaca_fascicularis
ENSSSCG00000004029	QKI	97	73.152	ENSMMUG00000049158	-	95	71.134	Macaca_mulatta
ENSSSCG00000004029	QKI	100	100.000	ENSMMUG00000000428	-	100	97.270	Macaca_mulatta
ENSSSCG00000004029	QKI	100	100.000	ENSMNEG00000043724	-	99	91.916	Macaca_nemestrina
ENSSSCG00000004029	QKI	100	100.000	ENSMLEG00000033347	-	100	97.270	Mandrillus_leucophaeus
ENSSSCG00000004029	QKI	97	81.923	ENSMAMG00000022446	qkib	90	81.905	Mastacembelus_armatus
ENSSSCG00000004029	QKI	99	76.968	ENSMAMG00000003069	qki2	99	76.968	Mastacembelus_armatus
ENSSSCG00000004029	QKI	99	78.113	ENSMZEG00005018363	qkib	90	78.846	Maylandia_zebra
ENSSSCG00000004029	QKI	100	77.612	ENSMZEG00005004737	qki2	99	76.676	Maylandia_zebra
ENSSSCG00000004029	QKI	97	97.665	ENSMGAG00000012341	QKI	100	94.464	Meleagris_gallopavo
ENSSSCG00000004029	QKI	97	98.833	ENSMAUG00000001920	Qk	100	94.483	Mesocricetus_auratus
ENSSSCG00000004029	QKI	100	100.000	ENSMICG00000009220	QKI	100	97.654	Microcebus_murinus
ENSSSCG00000004029	QKI	100	96.853	ENSMOCG00000008370	Qk	100	96.928	Microtus_ochrogaster
ENSSSCG00000004029	QKI	99	79.087	ENSMMOG00000007933	qkib	91	78.481	Mola_mola
ENSSSCG00000004029	QKI	100	77.612	ENSMMOG00000020767	qki2	98	77.070	Mola_mola
ENSSSCG00000004029	QKI	100	97.361	ENSMODG00000006434	QKI	100	97.361	Monodelphis_domestica
ENSSSCG00000004029	QKI	100	77.985	ENSMALG00000015261	qki2	98	77.460	Monopterus_albus
ENSSSCG00000004029	QKI	99	77.273	ENSMALG00000009475	qkib	91	77.603	Monopterus_albus
ENSSSCG00000004029	QKI	97	100.000	MGP_CAROLIEiJ_G0021057	Qk	100	96.154	Mus_caroli
ENSSSCG00000004029	QKI	100	100.000	ENSMUSG00000062078	Qk	100	97.654	Mus_musculus
ENSSSCG00000004029	QKI	100	97.654	MGP_PahariEiJ_G0023373	Qk	100	97.654	Mus_pahari
ENSSSCG00000004029	QKI	97	100.000	MGP_SPRETEiJ_G0021963	Qk	100	96.154	Mus_spretus
ENSSSCG00000004029	QKI	100	97.203	ENSMPUG00000006368	QKI	100	97.203	Mustela_putorius_furo
ENSSSCG00000004029	QKI	97	99.611	ENSMLUG00000002829	QKI	99	94.684	Myotis_lucifugus
ENSSSCG00000004029	QKI	100	96.503	ENSNGAG00000009989	Qk	100	96.587	Nannospalax_galili
ENSSSCG00000004029	QKI	100	75.725	ENSNBRG00000007549	qki2	95	77.316	Neolamprologus_brichardi
ENSSSCG00000004029	QKI	100	90.909	ENSNLEG00000011478	-	100	89.078	Nomascus_leucogenys
ENSSSCG00000004029	QKI	97	87.891	ENSMEUG00000008112	QKI	90	85.551	Notamacropus_eugenii
ENSSSCG00000004029	QKI	100	96.154	ENSOPRG00000011662	QKI	100	96.246	Ochotona_princeps
ENSSSCG00000004029	QKI	100	97.654	ENSODEG00000007408	QKI	100	97.654	Octodon_degus
ENSSSCG00000004029	QKI	100	77.985	ENSONIG00000008011	qki2	100	76.453	Oreochromis_niloticus
ENSSSCG00000004029	QKI	97	79.310	ENSONIG00000007133	qkib	96	78.481	Oreochromis_niloticus
ENSSSCG00000004029	QKI	97	99.609	ENSOANG00000011161	QKI	98	93.559	Ornithorhynchus_anatinus
ENSSSCG00000004029	QKI	100	100.000	ENSOCUG00000004117	-	97	99.653	Oryctolagus_cuniculus
ENSSSCG00000004029	QKI	100	77.612	ENSORLG00000027996	qki2	99	77.358	Oryzias_latipes
ENSSSCG00000004029	QKI	100	77.612	ENSOMEG00000007147	qki2	98	77.070	Oryzias_melastigma
ENSSSCG00000004029	QKI	100	97.654	ENSOGAG00000003634	QKI	100	97.654	Otolemur_garnettii
ENSSSCG00000004029	QKI	100	100.000	ENSOARG00000004811	QKI	100	100.000	Ovis_aries
ENSSSCG00000004029	QKI	100	100.000	ENSPPAG00000038059	-	97	100.000	Pan_paniscus
ENSSSCG00000004029	QKI	100	99.621	ENSPPRG00000013383	QKI	100	97.361	Panthera_pardus
ENSSSCG00000004029	QKI	100	99.621	ENSPTIG00000008797	QKI	86	96.928	Panthera_tigris_altaica
ENSSSCG00000004029	QKI	100	100.000	ENSPTRG00000018785	QKI	100	97.654	Pan_troglodytes
ENSSSCG00000004029	QKI	100	97.654	ENSPANG00000006711	-	98	100.000	Papio_anubis
ENSSSCG00000004029	QKI	86	92.920	ENSPKIG00000002778	-	98	80.831	Paramormyrops_kingsleyae
ENSSSCG00000004029	QKI	100	84.971	ENSPKIG00000010813	qki2	100	84.971	Paramormyrops_kingsleyae
ENSSSCG00000004029	QKI	100	97.067	ENSPSIG00000012197	QKI	100	97.067	Pelodiscus_sinensis
ENSSSCG00000004029	QKI	97	72.963	ENSPMGG00000010555	-	96	74.154	Periophthalmus_magnuspinnatus
ENSSSCG00000004029	QKI	100	97.203	ENSPEMG00000007765	Qk	100	97.270	Peromyscus_maniculatus_bairdii
ENSSSCG00000004029	QKI	100	99.621	ENSPCIG00000020191	QKI	100	97.361	Phascolarctos_cinereus
ENSSSCG00000004029	QKI	97	78.077	ENSPFOG00000014078	qki2	99	75.783	Poecilia_formosa
ENSSSCG00000004029	QKI	100	78.358	ENSPLAG00000020354	qki2	98	77.707	Poecilia_latipinna
ENSSSCG00000004029	QKI	99	77.551	ENSPMEG00000004997	qki2	99	77.551	Poecilia_mexicana
ENSSSCG00000004029	QKI	100	77.985	ENSPREG00000009154	qki2	99	76.968	Poecilia_reticulata
ENSSSCG00000004029	QKI	100	96.853	ENSPPYG00000017160	QKI	100	95.846	Pongo_abelii
ENSSSCG00000004029	QKI	54	100.000	ENSPCAG00000007832	-	55	100.000	Procavia_capensis
ENSSSCG00000004029	QKI	100	79.720	ENSPVAG00000015228	QKI	100	80.205	Pteropus_vampyrus
ENSSSCG00000004029	QKI	100	75.362	ENSPNYG00000004751	qki2	95	76.997	Pundamilia_nyererei
ENSSSCG00000004029	QKI	97	93.103	ENSPNAG00000002418	qkib	78	93.103	Pygocentrus_nattereri
ENSSSCG00000004029	QKI	100	89.811	ENSPNAG00000026483	qki2	98	88.498	Pygocentrus_nattereri
ENSSSCG00000004029	QKI	97	100.000	ENSRNOG00000048297	LOC108348175	100	96.429	Rattus_norvegicus
ENSSSCG00000004029	QKI	100	100.000	ENSRBIG00000043656	QKI	97	100.000	Rhinopithecus_bieti
ENSSSCG00000004029	QKI	100	97.203	ENSRROG00000040592	QKI	97	100.000	Rhinopithecus_roxellana
ENSSSCG00000004029	QKI	100	99.281	ENSSBOG00000036267	QKI	100	99.242	Saimiri_boliviensis_boliviensis
ENSSSCG00000004029	QKI	100	96.591	ENSSHAG00000014127	QKI	97	99.598	Sarcophilus_harrisii
ENSSSCG00000004029	QKI	100	88.679	ENSSFOG00015003466	qki2	100	86.880	Scleropages_formosus
ENSSSCG00000004029	QKI	100	95.076	ENSSFOG00015000145	qki	99	92.063	Scleropages_formosus
ENSSSCG00000004029	QKI	100	76.119	ENSSMAG00000006070	qki2	99	76.101	Scophthalmus_maximus
ENSSSCG00000004029	QKI	100	77.985	ENSSDUG00000013691	qki2	98	77.389	Seriola_dumerili
ENSSSCG00000004029	QKI	99	72.243	ENSSDUG00000013229	qkib	91	77.023	Seriola_dumerili
ENSSSCG00000004029	QKI	100	77.985	ENSSLDG00000017943	qki2	99	76.968	Seriola_lalandi_dorsalis
ENSSSCG00000004029	QKI	97	99.611	ENSSARG00000010852	QKI	100	96.246	Sorex_araneus
ENSSSCG00000004029	QKI	100	96.188	ENSSPUG00000012200	QKI	100	96.188	Sphenodon_punctatus
ENSSSCG00000004029	QKI	100	77.985	ENSSPAG00000002875	qki2	99	77.193	Stegastes_partitus
ENSSSCG00000004029	QKI	98	89.881	ENSTGUG00000009383	QKI	100	89.881	Taeniopygia_guttata
ENSSSCG00000004029	QKI	100	77.239	ENSTRUG00000018041	qki2	99	75.802	Takifugu_rubripes
ENSSSCG00000004029	QKI	99	76.404	ENSTNIG00000011099	qki2	99	75.731	Tetraodon_nigroviridis
ENSSSCG00000004029	QKI	100	96.503	ENSTTRG00000012050	QKI	99	96.481	Tursiops_truncatus
ENSSSCG00000004029	QKI	100	97.203	ENSUMAG00000011658	QKI	100	97.203	Ursus_maritimus
ENSSSCG00000004029	QKI	100	97.203	ENSVPAG00000009566	QKI	100	97.270	Vicugna_pacos
ENSSSCG00000004029	QKI	100	100.000	ENSVVUG00000001467	QKI	84	97.654	Vulpes_vulpes
ENSSSCG00000004029	QKI	100	92.857	ENSXETG00000015705	qki	100	91.254	Xenopus_tropicalis
ENSSSCG00000004029	QKI	99	76.678	ENSXCOG00000004131	qki2	95	71.207	Xiphophorus_couchianus
ENSSSCG00000004029	QKI	99	77.485	ENSXMAG00000017056	qki2	99	77.485	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0017124	SH3 domain binding	-	IEA	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0051028	mRNA transport	-	IEA	Process