EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000004358 (Gene tree)
Gene ID: 100625273
Gene Symbol: ASCC3
Alias: ASC1p200|HELIC1|RNAH|dJ121G13.4|dJ467N11.1
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 325167 bases
Position: chr1:67331948-67657114
Accession: 100625273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000004701	ResIII	PF04851.15	8.2e-26	1	2
ENSSSCP00000004701	ResIII	PF04851.15	8.2e-26	2	2
ENSSSCP00000004702	ResIII	PF04851.15	9.6e-26	1	2
ENSSSCP00000004702	ResIII	PF04851.15	9.6e-26	2	2
ENSSSCP00000042651	ResIII	PF04851.15	1e-25	1	2
ENSSSCP00000042651	ResIII	PF04851.15	1e-25	2	2
ENSSSCP00000004701	DEAD	PF00270.29	3.4e-53	1	2
ENSSSCP00000004701	DEAD	PF00270.29	3.4e-53	2	2
ENSSSCP00000004702	DEAD	PF00270.29	4.3e-53	1	2
ENSSSCP00000004702	DEAD	PF00270.29	4.3e-53	2	2
ENSSSCP00000042651	DEAD	PF00270.29	4.6e-53	1	2
ENSSSCP00000042651	DEAD	PF00270.29	4.6e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000004815	ASCC3-202	7418	-	ENSSSCP00000004701	2007 (aa)	-	F1RYR4
ENSSSCT00000004816	ASCC3-203	6867	-	ENSSSCP00000004702	2163 (aa)	-	F1RYR3
ENSSSCT00000058812	ASCC3-201	7604	XM_021090356	ENSSSCP00000042651	2203 (aa)	XP_020946015	A0A287AF88

Gene Model

Click here to download ENSSSCG00000004358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000004358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000004358	ASCC3	88	44.626	ENSSSCG00000008127	SNRNP200	87	44.902
ENSSSCG00000004358	ASCC3	68	35.180	ENSSSCG00000006912	HFM1	53	35.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000004358	ASCC3	100	91.875	ENSG00000112249	ASCC3	100	91.875	Homo_sapiens
ENSSSCG00000004358	ASCC3	100	95.461	ENSAMEG00000014749	ASCC3	100	95.461	Ailuropoda_melanoleuca
ENSSSCG00000004358	ASCC3	99	74.485	ENSACIG00000004551	ascc3	99	72.898	Amphilophus_citrinellus
ENSSSCG00000004358	ASCC3	99	76.769	ENSAOCG00000005106	ascc3	99	73.823	Amphiprion_ocellaris
ENSSSCG00000004358	ASCC3	98	77.868	ENSAPEG00000006181	ascc3	99	74.409	Amphiprion_percula
ENSSSCG00000004358	ASCC3	99	76.417	ENSATEG00000024950	ascc3	99	72.793	Anabas_testudineus
ENSSSCG00000004358	ASCC3	96	85.692	ENSAPLG00000012589	-	99	85.692	Anas_platyrhynchos
ENSSSCG00000004358	ASCC3	99	84.145	ENSACAG00000010080	ASCC3	100	81.855	Anolis_carolinensis
ENSSSCG00000004358	ASCC3	100	91.602	ENSANAG00000021476	ASCC3	100	91.602	Aotus_nancymaae
ENSSSCG00000004358	ASCC3	95	77.534	ENSACLG00000006736	ascc3	98	77.586	Astatotilapia_calliptera
ENSSSCG00000004358	ASCC3	99	74.912	ENSAMXG00000001395	ascc3	100	73.713	Astyanax_mexicanus
ENSSSCG00000004358	ASCC3	100	96.868	ENSBTAG00000020482	ASCC3	100	96.868	Bos_taurus
ENSSSCG00000004358	ASCC3	97	46.646	WBGene00013189	Y54E2A.4	99	44.705	Caenorhabditis_elegans
ENSSSCG00000004358	ASCC3	100	91.375	ENSCJAG00000001507	ASCC3	100	93.247	Callithrix_jacchus
ENSSSCG00000004358	ASCC3	100	95.778	ENSCAFG00000003554	ASCC3	100	95.778	Canis_familiaris
ENSSSCG00000004358	ASCC3	100	95.688	ENSCAFG00020016899	ASCC3	100	95.688	Canis_lupus_dingo
ENSSSCG00000004358	ASCC3	100	96.959	ENSCHIG00000023605	ASCC3	100	96.959	Capra_hircus
ENSSSCG00000004358	ASCC3	88	94.797	ENSTSYG00000006324	ASCC3	100	93.787	Carlito_syrichta
ENSSSCG00000004358	ASCC3	91	94.272	ENSCAPG00000010888	ASCC3	100	90.000	Cavia_aperea
ENSSSCG00000004358	ASCC3	99	91.571	ENSCPOG00000013989	ASCC3	100	90.740	Cavia_porcellus
ENSSSCG00000004358	ASCC3	100	91.693	ENSCCAG00000024230	ASCC3	100	91.693	Cebus_capucinus
ENSSSCG00000004358	ASCC3	100	91.875	ENSCATG00000011281	ASCC3	100	91.875	Cercocebus_atys
ENSSSCG00000004358	ASCC3	100	91.920	ENSCLAG00000009794	ASCC3	100	91.920	Chinchilla_lanigera
ENSSSCG00000004358	ASCC3	100	91.784	ENSCSAG00000014674	ASCC3	100	91.784	Chlorocebus_sabaeus
ENSSSCG00000004358	ASCC3	93	86.047	ENSCHOG00000002063	ASCC3	85	86.047	Choloepus_hoffmanni
ENSSSCG00000004358	ASCC3	99	85.335	ENSCPBG00000003881	ASCC3	100	83.619	Chrysemys_picta_bellii
ENSSSCG00000004358	ASCC3	89	60.736	ENSCSAVG00000007670	-	100	68.075	Ciona_savignyi
ENSSSCG00000004358	ASCC3	100	92.011	ENSCANG00000004215	ASCC3	100	92.011	Colobus_angolensis_palliatus
ENSSSCG00000004358	ASCC3	99	92.038	ENSCGRG00001000918	Ascc3	99	91.162	Cricetulus_griseus_chok1gshd
ENSSSCG00000004358	ASCC3	99	91.916	ENSCGRG00000012933	Ascc3	100	91.054	Cricetulus_griseus_crigri
ENSSSCG00000004358	ASCC3	98	76.682	ENSCSEG00000012811	ascc3	99	72.707	Cynoglossus_semilaevis
ENSSSCG00000004358	ASCC3	99	74.900	ENSCVAG00000013014	ascc3	99	71.519	Cyprinodon_variegatus
ENSSSCG00000004358	ASCC3	90	76.915	ENSDARG00000086678	ascc3	100	86.869	Danio_rerio
ENSSSCG00000004358	ASCC3	81	97.416	ENSDNOG00000010279	ASCC3	99	97.416	Dasypus_novemcinctus
ENSSSCG00000004358	ASCC3	100	92.056	ENSDORG00000008572	Ascc3	100	92.056	Dipodomys_ordii
ENSSSCG00000004358	ASCC3	99	54.115	FBgn0038344	obe	91	54.214	Drosophila_melanogaster
ENSSSCG00000004358	ASCC3	83	97.175	ENSETEG00000010694	-	75	97.175	Echinops_telfairi
ENSSSCG00000004358	ASCC3	59	78.522	ENSEBUG00000007355	-	99	78.522	Eptatretus_burgeri
ENSSSCG00000004358	ASCC3	54	74.042	ENSEBUG00000009772	-	99	74.042	Eptatretus_burgeri
ENSSSCG00000004358	ASCC3	100	95.642	ENSEASG00005006324	ASCC3	100	95.642	Equus_asinus_asinus
ENSSSCG00000004358	ASCC3	100	95.688	ENSECAG00000012013	ASCC3	100	95.688	Equus_caballus
ENSSSCG00000004358	ASCC3	96	84.719	ENSEEUG00000009748	ASCC3	99	84.719	Erinaceus_europaeus
ENSSSCG00000004358	ASCC3	100	77.734	ENSELUG00000023441	ascc3	100	77.734	Esox_lucius
ENSSSCG00000004358	ASCC3	100	96.051	ENSFCAG00000031266	ASCC3	100	96.051	Felis_catus
ENSSSCG00000004358	ASCC3	99	84.813	ENSFALG00000005260	ASCC3	99	83.045	Ficedula_albicollis
ENSSSCG00000004358	ASCC3	100	91.148	ENSFDAG00000011358	ASCC3	100	91.148	Fukomys_damarensis
ENSSSCG00000004358	ASCC3	98	76.896	ENSFHEG00000019247	ascc3	99	80.127	Fundulus_heteroclitus
ENSSSCG00000004358	ASCC3	99	74.293	ENSGMOG00000018158	ascc3	99	71.159	Gadus_morhua
ENSSSCG00000004358	ASCC3	99	84.955	ENSGALG00000015465	ASCC3	100	83.183	Gallus_gallus
ENSSSCG00000004358	ASCC3	99	76.334	ENSGACG00000014141	ascc3	100	72.530	Gasterosteus_aculeatus
ENSSSCG00000004358	ASCC3	87	88.639	ENSGAGG00000020794	ASCC3	99	86.105	Gopherus_agassizii
ENSSSCG00000004358	ASCC3	100	91.875	ENSGGOG00000002790	ASCC3	100	91.875	Gorilla_gorilla
ENSSSCG00000004358	ASCC3	87	78.235	ENSHBUG00000015110	ascc3	98	72.996	Haplochromis_burtoni
ENSSSCG00000004358	ASCC3	100	91.421	ENSHGLG00000002093	ASCC3	100	91.421	Heterocephalus_glaber_female
ENSSSCG00000004358	ASCC3	99	90.005	ENSHGLG00100005896	ASCC3	100	89.452	Heterocephalus_glaber_male
ENSSSCG00000004358	ASCC3	99	76.705	ENSHCOG00000021142	ascc3	100	73.004	Hippocampus_comes
ENSSSCG00000004358	ASCC3	99	77.277	ENSIPUG00000013863	ascc3	100	74.481	Ictalurus_punctatus
ENSSSCG00000004358	ASCC3	99	91.218	ENSSTOG00000006645	ASCC3	100	90.599	Ictidomys_tridecemlineatus
ENSSSCG00000004358	ASCC3	100	90.558	ENSJJAG00000022570	Ascc3	100	90.558	Jaculus_jaculus
ENSSSCG00000004358	ASCC3	99	76.838	ENSKMAG00000003953	ascc3	99	73.146	Kryptolebias_marmoratus
ENSSSCG00000004358	ASCC3	93	78.300	ENSLBEG00000009623	ascc3	99	78.354	Labrus_bergylta
ENSSSCG00000004358	ASCC3	82	81.942	ENSLACG00000015253	ascc3	100	81.942	Latimeria_chalumnae
ENSSSCG00000004358	ASCC3	99	80.933	ENSLOCG00000016550	ascc3	100	77.582	Lepisosteus_oculatus
ENSSSCG00000004358	ASCC3	89	79.763	ENSLAFG00000011363	ASCC3	100	79.763	Loxodonta_africana
ENSSSCG00000004358	ASCC3	100	91.875	ENSMFAG00000002081	ASCC3	100	91.875	Macaca_fascicularis
ENSSSCG00000004358	ASCC3	100	91.920	ENSMMUG00000022287	ASCC3	100	91.920	Macaca_mulatta
ENSSSCG00000004358	ASCC3	100	91.920	ENSMNEG00000032760	ASCC3	100	91.920	Macaca_nemestrina
ENSSSCG00000004358	ASCC3	100	90.588	ENSMLEG00000035241	ASCC3	100	90.588	Mandrillus_leucophaeus
ENSSSCG00000004358	ASCC3	99	76.842	ENSMAMG00000005917	ascc3	99	73.237	Mastacembelus_armatus
ENSSSCG00000004358	ASCC3	84	81.059	ENSMZEG00005002710	ascc3	74	81.122	Maylandia_zebra
ENSSSCG00000004358	ASCC3	99	84.018	ENSMGAG00000013551	ASCC3	100	82.249	Meleagris_gallopavo
ENSSSCG00000004358	ASCC3	99	92.296	ENSMAUG00000018304	Ascc3	100	91.235	Mesocricetus_auratus
ENSSSCG00000004358	ASCC3	100	92.646	ENSMICG00000008861	ASCC3	100	92.646	Microcebus_murinus
ENSSSCG00000004358	ASCC3	100	90.649	ENSMOCG00000004549	Ascc3	100	90.649	Microtus_ochrogaster
ENSSSCG00000004358	ASCC3	99	73.122	ENSMMOG00000003198	ascc3	99	70.638	Mola_mola
ENSSSCG00000004358	ASCC3	100	87.649	ENSMODG00000018082	ASCC3	99	86.827	Monodelphis_domestica
ENSSSCG00000004358	ASCC3	99	74.080	ENSMALG00000015536	ascc3	99	72.523	Monopterus_albus
ENSSSCG00000004358	ASCC3	99	91.118	MGP_CAROLIEiJ_G0015302	Ascc3	100	90.236	Mus_caroli
ENSSSCG00000004358	ASCC3	99	90.818	ENSMUSG00000038774	Ascc3	100	90.009	Mus_musculus
ENSSSCG00000004358	ASCC3	99	90.968	MGP_SPRETEiJ_G0016111	Ascc3	100	90.145	Mus_spretus
ENSSSCG00000004358	ASCC3	100	95.597	ENSMPUG00000001675	ASCC3	100	95.597	Mustela_putorius_furo
ENSSSCG00000004358	ASCC3	100	94.507	ENSMLUG00000002886	ASCC3	100	94.507	Myotis_lucifugus
ENSSSCG00000004358	ASCC3	100	91.194	ENSNGAG00000000702	Ascc3	100	91.194	Nannospalax_galili
ENSSSCG00000004358	ASCC3	89	66.985	ENSNBRG00000022083	ascc3	92	66.985	Neolamprologus_brichardi
ENSSSCG00000004358	ASCC3	100	91.875	ENSNLEG00000013890	ASCC3	100	91.875	Nomascus_leucogenys
ENSSSCG00000004358	ASCC3	97	94.737	ENSMEUG00000003061	ASCC3	83	94.737	Notamacropus_eugenii
ENSSSCG00000004358	ASCC3	88	98.667	ENSOPRG00000010249	-	79	98.667	Ochotona_princeps
ENSSSCG00000004358	ASCC3	100	91.602	ENSODEG00000000069	ASCC3	100	91.602	Octodon_degus
ENSSSCG00000004358	ASCC3	99	76.509	ENSONIG00000016540	ascc3	99	72.867	Oreochromis_niloticus
ENSSSCG00000004358	ASCC3	99	85.422	ENSOANG00000008944	ASCC3	100	84.194	Ornithorhynchus_anatinus
ENSSSCG00000004358	ASCC3	99	93.029	ENSOCUG00000002766	ASCC3	100	91.996	Oryctolagus_cuniculus
ENSSSCG00000004358	ASCC3	99	75.768	ENSORLG00000004221	ascc3	99	73.387	Oryzias_latipes
ENSSSCG00000004358	ASCC3	94	78.307	ENSORLG00020022595	ascc3	97	78.307	Oryzias_latipes_hni
ENSSSCG00000004358	ASCC3	99	75.768	ENSORLG00015009231	ascc3	99	73.387	Oryzias_latipes_hsok
ENSSSCG00000004358	ASCC3	98	75.974	ENSOMEG00000019630	ascc3	100	71.935	Oryzias_melastigma
ENSSSCG00000004358	ASCC3	88	93.687	ENSOGAG00000009875	ASCC3	100	91.500	Otolemur_garnettii
ENSSSCG00000004358	ASCC3	100	97.004	ENSOARG00000011627	ASCC3	100	97.004	Ovis_aries
ENSSSCG00000004358	ASCC3	100	91.875	ENSPPAG00000030772	ASCC3	100	91.875	Pan_paniscus
ENSSSCG00000004358	ASCC3	100	95.915	ENSPPRG00000011358	ASCC3	100	95.915	Panthera_pardus
ENSSSCG00000004358	ASCC3	100	95.778	ENSPTIG00000006331	ASCC3	100	95.778	Panthera_tigris_altaica
ENSSSCG00000004358	ASCC3	100	91.875	ENSPTRG00000018448	ASCC3	100	91.875	Pan_troglodytes
ENSSSCG00000004358	ASCC3	100	91.784	ENSPANG00000006307	ASCC3	100	91.784	Papio_anubis
ENSSSCG00000004358	ASCC3	98	78.724	ENSPKIG00000013639	ascc3	100	74.571	Paramormyrops_kingsleyae
ENSSSCG00000004358	ASCC3	86	85.896	ENSPSIG00000002620	-	96	85.896	Pelodiscus_sinensis
ENSSSCG00000004358	ASCC3	99	91.417	ENSPEMG00000015319	Ascc3	100	91.008	Peromyscus_maniculatus_bairdii
ENSSSCG00000004358	ASCC3	75	79.543	ENSPMAG00000002163	-	100	79.543	Petromyzon_marinus
ENSSSCG00000004358	ASCC3	99	87.918	ENSPCIG00000017288	ASCC3	99	87.136	Phascolarctos_cinereus
ENSSSCG00000004358	ASCC3	87	79.249	ENSPFOG00000001462	ascc3	99	74.655	Poecilia_formosa
ENSSSCG00000004358	ASCC3	99	77.043	ENSPREG00000017616	ascc3	99	73.246	Poecilia_reticulata
ENSSSCG00000004358	ASCC3	100	90.422	ENSPPYG00000016869	ASCC3	100	90.422	Pongo_abelii
ENSSSCG00000004358	ASCC3	100	80.890	ENSPCAG00000008834	ASCC3	100	80.890	Procavia_capensis
ENSSSCG00000004358	ASCC3	99	89.576	ENSPVAG00000012827	ASCC3	100	87.562	Pteropus_vampyrus
ENSSSCG00000004358	ASCC3	95	77.429	ENSPNYG00000018913	ascc3	98	77.482	Pundamilia_nyererei
ENSSSCG00000004358	ASCC3	94	79.735	ENSPNAG00000016413	ascc3	98	79.947	Pygocentrus_nattereri
ENSSSCG00000004358	ASCC3	99	91.459	ENSRNOG00000037604	Ascc3	99	90.591	Rattus_norvegicus
ENSSSCG00000004358	ASCC3	100	91.920	ENSRROG00000045402	ASCC3	100	91.920	Rhinopithecus_roxellana
ENSSSCG00000004358	ASCC3	81	47.808	YGR271W	-	82	47.808	Saccharomyces_cerevisiae
ENSSSCG00000004358	ASCC3	100	91.693	ENSSBOG00000025142	ASCC3	100	91.693	Saimiri_boliviensis_boliviensis
ENSSSCG00000004358	ASCC3	99	88.068	ENSSHAG00000016496	ASCC3	100	86.911	Sarcophilus_harrisii
ENSSSCG00000004358	ASCC3	99	76.908	ENSSFOG00015010273	ascc3	99	73.848	Scleropages_formosus
ENSSSCG00000004358	ASCC3	99	76.536	ENSSMAG00000012927	ascc3	99	73.023	Scophthalmus_maximus
ENSSSCG00000004358	ASCC3	99	77.374	ENSSDUG00000010897	ascc3	99	73.629	Seriola_dumerili
ENSSSCG00000004358	ASCC3	98	77.339	ENSSLDG00000021782	ascc3	99	73.493	Seriola_lalandi_dorsalis
ENSSSCG00000004358	ASCC3	100	90.992	ENSSARG00000001858	ASCC3	92	90.992	Sorex_araneus
ENSSSCG00000004358	ASCC3	99	85.178	ENSSPUG00000001842	ASCC3	100	83.273	Sphenodon_punctatus
ENSSSCG00000004358	ASCC3	99	76.838	ENSSPAG00000007677	ascc3	99	73.572	Stegastes_partitus
ENSSSCG00000004358	ASCC3	99	84.465	ENSTGUG00000012262	ASCC3	99	84.465	Taeniopygia_guttata
ENSSSCG00000004358	ASCC3	97	70.143	ENSTNIG00000005079	ascc3	100	67.636	Tetraodon_nigroviridis
ENSSSCG00000004358	ASCC3	91	98.507	ENSTBEG00000015236	ASCC3	86	98.507	Tupaia_belangeri
ENSSSCG00000004358	ASCC3	100	94.709	ENSTTRG00000008255	ASCC3	96	94.709	Tursiops_truncatus
ENSSSCG00000004358	ASCC3	75	98.885	ENSUAMG00000023340	-	98	98.885	Ursus_americanus
ENSSSCG00000004358	ASCC3	100	94.598	ENSUMAG00000021200	ASCC3	100	94.598	Ursus_maritimus
ENSSSCG00000004358	ASCC3	100	92.877	ENSVPAG00000001408	ASCC3	100	92.877	Vicugna_pacos
ENSSSCG00000004358	ASCC3	100	95.642	ENSVVUG00000015397	ASCC3	100	96.201	Vulpes_vulpes
ENSSSCG00000004358	ASCC3	87	81.850	ENSXETG00000032212	-	100	81.850	Xenopus_tropicalis
ENSSSCG00000004358	ASCC3	99	76.853	ENSXMAG00000000071	ascc3	100	73.032	Xiphophorus_maculatus