EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000004408 (Gene tree)
Gene ID: 100152155
Gene Symbol: SMPD2
Alias: ISC1|nSMase
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3856 bases
Position: chr1:75508298-75512153
Accession: 100152155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000004756	Exo_endo_phos	PF03372.23	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000004871	SMPD2-201	2376	XM_001925290	ENSSSCP00000004756	423 (aa)	XP_001925325	F1RSY4

Gene Model

Click here to download ENSSSCG00000004408's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00600	Sphingolipid metabolism	KEGG
ssc01100	Metabolic pathways	KEGG
ssc04071	Sphingolipid signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000004408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000004408	SMPD2	100	83.924	ENSG00000135587	SMPD2	100	83.924	Homo_sapiens
ENSSSCG00000004408	SMPD2	100	88.652	ENSAMEG00000016431	SMPD2	100	88.652	Ailuropoda_melanoleuca
ENSSSCG00000004408	SMPD2	94	45.060	ENSACIG00000010069	smpd2b	97	43.961	Amphilophus_citrinellus
ENSSSCG00000004408	SMPD2	90	46.599	ENSAOCG00000014544	smpd2b	73	51.393	Amphiprion_ocellaris
ENSSSCG00000004408	SMPD2	90	46.348	ENSAPEG00000023764	smpd2b	73	51.084	Amphiprion_percula
ENSSSCG00000004408	SMPD2	98	43.991	ENSATEG00000025113	smpd2b	100	42.500	Anabas_testudineus
ENSSSCG00000004408	SMPD2	72	55.921	ENSACAG00000009270	SMPD2	74	56.106	Anolis_carolinensis
ENSSSCG00000004408	SMPD2	99	82.464	ENSANAG00000028732	SMPD2	100	82.464	Aotus_nancymaae
ENSSSCG00000004408	SMPD2	93	46.229	ENSACLG00000022892	smpd2b	72	51.875	Astatotilapia_calliptera
ENSSSCG00000004408	SMPD2	73	51.118	ENSAMXG00000013614	smpd2b	73	51.118	Astyanax_mexicanus
ENSSSCG00000004408	SMPD2	100	88.416	ENSBTAG00000008145	SMPD2	69	88.416	Bos_taurus
ENSSSCG00000004408	SMPD2	79	38.068	WBGene00012105	T27F6.6	67	40.411	Caenorhabditis_elegans
ENSSSCG00000004408	SMPD2	99	82.227	ENSCJAG00000005756	SMPD2	100	82.227	Callithrix_jacchus
ENSSSCG00000004408	SMPD2	100	87.234	ENSCAFG00000003816	SMPD2	100	87.234	Canis_familiaris
ENSSSCG00000004408	SMPD2	100	88.652	ENSCHIG00000022563	SMPD2	100	88.652	Capra_hircus
ENSSSCG00000004408	SMPD2	100	79.669	ENSTSYG00000008525	SMPD2	100	79.669	Carlito_syrichta
ENSSSCG00000004408	SMPD2	81	74.419	ENSCAPG00000008057	SMPD2	97	74.419	Cavia_aperea
ENSSSCG00000004408	SMPD2	100	77.778	ENSCPOG00000003102	SMPD2	98	77.778	Cavia_porcellus
ENSSSCG00000004408	SMPD2	99	82.701	ENSCCAG00000036357	SMPD2	100	82.701	Cebus_capucinus
ENSSSCG00000004408	SMPD2	100	82.979	ENSCATG00000015266	SMPD2	100	82.979	Cercocebus_atys
ENSSSCG00000004408	SMPD2	99	72.062	ENSCLAG00000009948	SMPD2	98	72.506	Chinchilla_lanigera
ENSSSCG00000004408	SMPD2	100	82.506	ENSCSAG00000015322	SMPD2	100	82.506	Chlorocebus_sabaeus
ENSSSCG00000004408	SMPD2	74	57.325	ENSCPBG00000017837	SMPD2	77	57.325	Chrysemys_picta_bellii
ENSSSCG00000004408	SMPD2	100	82.506	ENSCANG00000029491	SMPD2	100	82.506	Colobus_angolensis_palliatus
ENSSSCG00000004408	SMPD2	97	80.097	ENSCGRG00001019999	Smpd2	98	80.097	Cricetulus_griseus_chok1gshd
ENSSSCG00000004408	SMPD2	97	80.097	ENSCGRG00000008928	Smpd2	98	80.097	Cricetulus_griseus_crigri
ENSSSCG00000004408	SMPD2	94	44.096	ENSCSEG00000016030	smpd2b	76	49.258	Cynoglossus_semilaevis
ENSSSCG00000004408	SMPD2	94	47.202	ENSCVAG00000020815	smpd2b	73	53.251	Cyprinodon_variegatus
ENSSSCG00000004408	SMPD2	75	49.527	ENSDARG00000052701	smpd2b	73	49.527	Danio_rerio
ENSSSCG00000004408	SMPD2	76	49.062	ENSDARG00000040523	smpd2a	75	49.062	Danio_rerio
ENSSSCG00000004408	SMPD2	100	82.979	ENSDNOG00000003948	SMPD2	99	82.979	Dasypus_novemcinctus
ENSSSCG00000004408	SMPD2	99	80.806	ENSDORG00000006485	Smpd2	100	80.806	Dipodomys_ordii
ENSSSCG00000004408	SMPD2	66	34.520	FBgn0035421	CG12034	64	34.948	Drosophila_melanogaster
ENSSSCG00000004408	SMPD2	79	50.746	ENSEBUG00000002962	smpd2b	74	52.050	Eptatretus_burgeri
ENSSSCG00000004408	SMPD2	100	86.525	ENSEASG00005006484	SMPD2	100	86.525	Equus_asinus_asinus
ENSSSCG00000004408	SMPD2	100	86.288	ENSECAG00000016972	SMPD2	100	86.288	Equus_caballus
ENSSSCG00000004408	SMPD2	95	44.471	ENSELUG00000021534	smpd2b	94	43.230	Esox_lucius
ENSSSCG00000004408	SMPD2	100	88.652	ENSFCAG00000006358	SMPD2	100	88.652	Felis_catus
ENSSSCG00000004408	SMPD2	75	59.306	ENSFALG00000003639	SMPD2	94	52.455	Ficedula_albicollis
ENSSSCG00000004408	SMPD2	94	48.175	ENSFHEG00000017395	smpd2b	73	54.375	Fundulus_heteroclitus
ENSSSCG00000004408	SMPD2	93	42.289	ENSGMOG00000015239	smpd2b	94	41.542	Gadus_morhua
ENSSSCG00000004408	SMPD2	76	57.764	ENSGALG00000033245	SMPD2	78	57.764	Gallus_gallus
ENSSSCG00000004408	SMPD2	97	46.207	ENSGAFG00000016345	smpd2b	71	54.140	Gambusia_affinis
ENSSSCG00000004408	SMPD2	94	45.966	ENSGACG00000005132	smpd2b	74	52.038	Gasterosteus_aculeatus
ENSSSCG00000004408	SMPD2	74	58.280	ENSGAGG00000023942	SMPD2	76	58.280	Gopherus_agassizii
ENSSSCG00000004408	SMPD2	100	84.161	ENSGGOG00000003394	SMPD2	100	84.161	Gorilla_gorilla
ENSSSCG00000004408	SMPD2	99	79.621	ENSHGLG00000000226	SMPD2	100	79.621	Heterocephalus_glaber_female
ENSSSCG00000004408	SMPD2	99	79.621	ENSHGLG00100016698	SMPD2	100	79.621	Heterocephalus_glaber_male
ENSSSCG00000004408	SMPD2	74	50.476	ENSHCOG00000001358	smpd2b	73	50.476	Hippocampus_comes
ENSSSCG00000004408	SMPD2	92	42.711	ENSIPUG00000017284	smpd2a	67	52.364	Ictalurus_punctatus
ENSSSCG00000004408	SMPD2	93	45.522	ENSIPUG00000024794	smpd2b	94	46.020	Ictalurus_punctatus
ENSSSCG00000004408	SMPD2	99	81.055	ENSSTOG00000028661	SMPD2	99	81.055	Ictidomys_tridecemlineatus
ENSSSCG00000004408	SMPD2	99	82.660	ENSJJAG00000019368	Smpd2	100	82.660	Jaculus_jaculus
ENSSSCG00000004408	SMPD2	93	46.782	ENSKMAG00000015753	smpd2b	71	53.503	Kryptolebias_marmoratus
ENSSSCG00000004408	SMPD2	95	44.526	ENSLBEG00000024878	smpd2b	95	44.039	Labrus_bergylta
ENSSSCG00000004408	SMPD2	90	46.292	ENSLACG00000016351	smpd2b	77	51.562	Latimeria_chalumnae
ENSSSCG00000004408	SMPD2	74	50.955	ENSLOCG00000009741	smpd2b	73	50.955	Lepisosteus_oculatus
ENSSSCG00000004408	SMPD2	99	77.910	ENSLAFG00000003298	SMPD2	100	77.910	Loxodonta_africana
ENSSSCG00000004408	SMPD2	100	82.742	ENSMFAG00000033236	SMPD2	100	82.742	Macaca_fascicularis
ENSSSCG00000004408	SMPD2	100	82.742	ENSMNEG00000042401	SMPD2	100	82.742	Macaca_nemestrina
ENSSSCG00000004408	SMPD2	88	82.620	ENSMLEG00000039457	SMPD2	100	82.620	Mandrillus_leucophaeus
ENSSSCG00000004408	SMPD2	94	46.377	ENSMAMG00000004710	smpd2b	73	52.012	Mastacembelus_armatus
ENSSSCG00000004408	SMPD2	93	46.229	ENSMZEG00005002958	smpd2b	72	51.875	Maylandia_zebra
ENSSSCG00000004408	SMPD2	76	56.966	ENSMGAG00000006821	SMPD2	78	56.966	Meleagris_gallopavo
ENSSSCG00000004408	SMPD2	97	81.068	ENSMAUG00000008721	Smpd2	98	81.068	Mesocricetus_auratus
ENSSSCG00000004408	SMPD2	100	83.688	ENSMICG00000014442	SMPD2	100	83.688	Microcebus_murinus
ENSSSCG00000004408	SMPD2	98	77.240	ENSMOCG00000019666	Smpd2	99	77.240	Microtus_ochrogaster
ENSSSCG00000004408	SMPD2	92	46.420	ENSMMOG00000012679	smpd2b	74	51.703	Mola_mola
ENSSSCG00000004408	SMPD2	93	57.843	ENSMODG00000017971	SMPD2	93	57.843	Monodelphis_domestica
ENSSSCG00000004408	SMPD2	94	47.129	ENSMALG00000000267	smpd2b	77	52.778	Monopterus_albus
ENSSSCG00000004408	SMPD2	99	76.667	MGP_CAROLIEiJ_G0015268	Smpd2	100	76.667	Mus_caroli
ENSSSCG00000004408	SMPD2	99	76.190	ENSMUSG00000019822	Smpd2	100	76.190	Mus_musculus
ENSSSCG00000004408	SMPD2	99	76.429	MGP_PahariEiJ_G0030686	Smpd2	100	76.429	Mus_pahari
ENSSSCG00000004408	SMPD2	99	76.190	MGP_SPRETEiJ_G0016077	Smpd2	100	76.190	Mus_spretus
ENSSSCG00000004408	SMPD2	100	87.707	ENSMPUG00000010005	SMPD2	100	87.707	Mustela_putorius_furo
ENSSSCG00000004408	SMPD2	100	85.579	ENSMLUG00000003793	SMPD2	100	85.579	Myotis_lucifugus
ENSSSCG00000004408	SMPD2	58	86.885	ENSNGAG00000013670	Smpd2	93	86.885	Nannospalax_galili
ENSSSCG00000004408	SMPD2	91	45.387	ENSNBRG00000008403	smpd2b	74	49.691	Neolamprologus_brichardi
ENSSSCG00000004408	SMPD2	100	82.742	ENSNLEG00000012570	SMPD2	100	82.742	Nomascus_leucogenys
ENSSSCG00000004408	SMPD2	95	54.726	ENSMEUG00000004602	SMPD2	95	54.726	Notamacropus_eugenii
ENSSSCG00000004408	SMPD2	100	78.723	ENSOPRG00000012612	SMPD2	100	78.723	Ochotona_princeps
ENSSSCG00000004408	SMPD2	93	45.966	ENSONIG00000014702	smpd2b	72	51.572	Oreochromis_niloticus
ENSSSCG00000004408	SMPD2	100	82.270	ENSOCUG00000008607	SMPD2	100	82.270	Oryctolagus_cuniculus
ENSSSCG00000004408	SMPD2	92	47.420	ENSORLG00000006334	smpd2b	71	53.797	Oryzias_latipes
ENSSSCG00000004408	SMPD2	92	47.160	ENSORLG00020015231	smpd2b	71	53.503	Oryzias_latipes_hni
ENSSSCG00000004408	SMPD2	92	47.160	ENSORLG00015010424	smpd2b	71	53.503	Oryzias_latipes_hsok
ENSSSCG00000004408	SMPD2	92	46.552	ENSOMEG00000016121	smpd2b	71	52.698	Oryzias_melastigma
ENSSSCG00000004408	SMPD2	100	79.669	ENSOGAG00000015505	SMPD2	100	78.487	Otolemur_garnettii
ENSSSCG00000004408	SMPD2	100	81.265	ENSOARG00000010409	SMPD2	100	81.265	Ovis_aries
ENSSSCG00000004408	SMPD2	100	83.924	ENSPPAG00000031363	SMPD2	100	83.924	Pan_paniscus
ENSSSCG00000004408	SMPD2	100	89.125	ENSPPRG00000000099	SMPD2	100	89.125	Panthera_pardus
ENSSSCG00000004408	SMPD2	100	89.125	ENSPTIG00000008954	SMPD2	100	89.125	Panthera_tigris_altaica
ENSSSCG00000004408	SMPD2	100	83.924	ENSPTRG00000018484	SMPD2	100	83.924	Pan_troglodytes
ENSSSCG00000004408	SMPD2	100	83.215	ENSPANG00000024480	SMPD2	100	83.215	Papio_anubis
ENSSSCG00000004408	SMPD2	75	49.844	ENSPKIG00000011322	smpd2a	70	49.844	Paramormyrops_kingsleyae
ENSSSCG00000004408	SMPD2	72	50.162	ENSPMGG00000000230	smpd2b	75	50.162	Periophthalmus_magnuspinnatus
ENSSSCG00000004408	SMPD2	97	78.729	ENSPEMG00000018109	Smpd2	99	78.729	Peromyscus_maniculatus_bairdii
ENSSSCG00000004408	SMPD2	76	51.852	ENSPMAG00000002460	smpd2b	92	51.852	Petromyzon_marinus
ENSSSCG00000004408	SMPD2	93	60.000	ENSPCIG00000005984	SMPD2	93	60.000	Phascolarctos_cinereus
ENSSSCG00000004408	SMPD2	93	48.148	ENSPFOG00000014164	smpd2b	71	54.459	Poecilia_formosa
ENSSSCG00000004408	SMPD2	93	48.148	ENSPLAG00000014950	smpd2b	71	54.459	Poecilia_latipinna
ENSSSCG00000004408	SMPD2	93	48.148	ENSPMEG00000002286	smpd2b	71	54.459	Poecilia_mexicana
ENSSSCG00000004408	SMPD2	93	47.901	ENSPREG00000012181	smpd2b	71	54.140	Poecilia_reticulata
ENSSSCG00000004408	SMPD2	100	82.979	ENSPPYG00000016908	-	73	82.979	Pongo_abelii
ENSSSCG00000004408	SMPD2	100	77.778	ENSPCAG00000011808	SMPD2	100	77.778	Procavia_capensis
ENSSSCG00000004408	SMPD2	100	84.161	ENSPCOG00000001714	SMPD2	100	84.161	Propithecus_coquereli
ENSSSCG00000004408	SMPD2	100	86.525	ENSPVAG00000006556	SMPD2	100	86.525	Pteropus_vampyrus
ENSSSCG00000004408	SMPD2	93	46.782	ENSPNYG00000005567	smpd2b	71	51.923	Pundamilia_nyererei
ENSSSCG00000004408	SMPD2	78	50.599	ENSPNAG00000007986	smpd2b	73	51.875	Pygocentrus_nattereri
ENSSSCG00000004408	SMPD2	100	78.487	ENSRNOG00000000306	Smpd2	100	78.487	Rattus_norvegicus
ENSSSCG00000004408	SMPD2	100	82.979	ENSRBIG00000033388	SMPD2	100	82.979	Rhinopithecus_bieti
ENSSSCG00000004408	SMPD2	100	83.215	ENSRROG00000037705	SMPD2	100	83.215	Rhinopithecus_roxellana
ENSSSCG00000004408	SMPD2	99	82.938	ENSSBOG00000033929	SMPD2	100	82.938	Saimiri_boliviensis_boliviensis
ENSSSCG00000004408	SMPD2	74	50.000	ENSSFOG00015022890	smpd2	72	50.000	Scleropages_formosus
ENSSSCG00000004408	SMPD2	94	45.542	ENSSMAG00000008963	smpd2b	73	50.774	Scophthalmus_maximus
ENSSSCG00000004408	SMPD2	92	45.185	ENSSDUG00000000098	smpd2b	74	50.613	Seriola_dumerili
ENSSSCG00000004408	SMPD2	92	46.366	ENSSLDG00000009497	smpd2b	74	51.840	Seriola_lalandi_dorsalis
ENSSSCG00000004408	SMPD2	100	84.634	ENSSARG00000006192	SMPD2	100	84.634	Sorex_araneus
ENSSSCG00000004408	SMPD2	74	56.825	ENSSPUG00000013852	SMPD2	76	56.825	Sphenodon_punctatus
ENSSSCG00000004408	SMPD2	94	45.169	ENSSPAG00000001844	smpd2b	73	50.464	Stegastes_partitus
ENSSSCG00000004408	SMPD2	75	56.467	ENSTGUG00000001713	SMPD2	94	51.421	Taeniopygia_guttata
ENSSSCG00000004408	SMPD2	93	46.667	ENSTRUG00000025701	smpd2b	74	52.665	Takifugu_rubripes
ENSSSCG00000004408	SMPD2	93	46.650	ENSTNIG00000018297	smpd2b	78	52.681	Tetraodon_nigroviridis
ENSSSCG00000004408	SMPD2	100	81.797	ENSTBEG00000009336	SMPD2	100	81.797	Tupaia_belangeri
ENSSSCG00000004408	SMPD2	100	84.634	ENSTTRG00000004183	SMPD2	100	84.634	Tursiops_truncatus
ENSSSCG00000004408	SMPD2	100	89.125	ENSUAMG00000018011	SMPD2	100	89.125	Ursus_americanus
ENSSSCG00000004408	SMPD2	99	82.014	ENSUMAG00000025505	SMPD2	93	89.067	Ursus_maritimus
ENSSSCG00000004408	SMPD2	81	48.547	ENSXETG00000000421	smpd2	82	49.091	Xenopus_tropicalis
ENSSSCG00000004408	SMPD2	90	46.803	ENSXCOG00000015987	smpd2b	70	53.333	Xiphophorus_couchianus
ENSSSCG00000004408	SMPD2	93	47.407	ENSXMAG00000018088	smpd2b	71	53.822	Xiphophorus_maculatus