EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000004752 (Gene tree)
Gene ID: 100516945
Gene Symbol: EXD1
Alias: EXDL1|MGC33637
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 40637 bases
Position: chr1:130112847-130153483
Accession: 100516945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000045950	DNA_pol_A_exo1	PF01612.20	1.9e-09	1	1
ENSSSCP00000005124	DNA_pol_A_exo1	PF01612.20	2e-09	1	1
ENSSSCP00000055477	DNA_pol_A_exo1	PF01612.20	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000048087	EXD1-203	3116	-	ENSSSCP00000045950	472 (aa)	-	A0A287APJ8
ENSSSCT00000005251	EXD1-202	1685	XM_013993166	ENSSSCP00000005124	543 (aa)	XP_013848620	F1SSV1
ENSSSCT00000050526	EXD1-201	2856	XM_005659737	ENSSSCP00000055477	566 (aa)	XP_005659794	A0A287BHD7

Gene Model

Click here to download ENSSSCG00000004752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000004752's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000004752	EXD1	100	81.565	ENSG00000178997	EXD1	100	90.909	Homo_sapiens
ENSSSCG00000004752	EXD1	69	40.682	ENSAPOG00000004287	-	76	51.111	Acanthochromis_polyacanthus
ENSSSCG00000004752	EXD1	99	83.951	ENSAMEG00000016793	EXD1	99	83.951	Ailuropoda_melanoleuca
ENSSSCG00000004752	EXD1	69	46.193	ENSAOCG00000009355	-	69	46.193	Amphiprion_ocellaris
ENSSSCG00000004752	EXD1	59	46.746	ENSAPEG00000002194	-	86	46.746	Amphiprion_percula
ENSSSCG00000004752	EXD1	51	51.653	ENSATEG00000002623	-	55	51.653	Anabas_testudineus
ENSSSCG00000004752	EXD1	70	58.629	ENSACAG00000003676	EXD1	100	58.629	Anolis_carolinensis
ENSSSCG00000004752	EXD1	100	82.753	ENSANAG00000029058	EXD1	100	82.753	Aotus_nancymaae
ENSSSCG00000004752	EXD1	69	42.785	ENSACLG00000001361	-	70	43.291	Astatotilapia_calliptera
ENSSSCG00000004752	EXD1	74	40.509	ENSAMXG00000026016	-	81	40.509	Astyanax_mexicanus
ENSSSCG00000004752	EXD1	100	86.373	ENSBTAG00000008363	EXD1	100	86.373	Bos_taurus
ENSSSCG00000004752	EXD1	99	77.661	ENSCJAG00000020765	EXD1	99	77.661	Callithrix_jacchus
ENSSSCG00000004752	EXD1	99	84.071	ENSCAFG00000009510	EXD1	99	84.071	Canis_familiaris
ENSSSCG00000004752	EXD1	87	83.894	ENSCAFG00020005504	EXD1	99	83.894	Canis_lupus_dingo
ENSSSCG00000004752	EXD1	100	84.067	ENSCHIG00000019606	EXD1	100	82.487	Capra_hircus
ENSSSCG00000004752	EXD1	100	72.973	ENSCPOG00000010573	EXD1	100	72.348	Cavia_porcellus
ENSSSCG00000004752	EXD1	100	79.617	ENSCCAG00000016905	EXD1	100	79.617	Cebus_capucinus
ENSSSCG00000004752	EXD1	100	81.391	ENSCATG00000037400	EXD1	100	81.391	Cercocebus_atys
ENSSSCG00000004752	EXD1	99	62.346	ENSCSAG00000007647	EXD1	100	63.178	Chlorocebus_sabaeus
ENSSSCG00000004752	EXD1	100	73.750	ENSCHOG00000011441	EXD1	99	73.715	Choloepus_hoffmanni
ENSSSCG00000004752	EXD1	99	55.363	ENSCPBG00000013511	EXD1	93	55.536	Chrysemys_picta_bellii
ENSSSCG00000004752	EXD1	100	78.609	ENSCANG00000036848	EXD1	100	78.609	Colobus_angolensis_palliatus
ENSSSCG00000004752	EXD1	99	76.491	ENSCGRG00001011355	Exd1	97	76.491	Cricetulus_griseus_chok1gshd
ENSSSCG00000004752	EXD1	99	76.491	ENSCGRG00000011633	Exd1	99	76.491	Cricetulus_griseus_crigri
ENSSSCG00000004752	EXD1	68	43.490	ENSCSEG00000000904	-	68	43.490	Cynoglossus_semilaevis
ENSSSCG00000004752	EXD1	63	36.415	ENSDARG00000098669	exd1	85	41.825	Danio_rerio
ENSSSCG00000004752	EXD1	100	82.465	ENSDNOG00000011410	EXD1	100	82.465	Dasypus_novemcinctus
ENSSSCG00000004752	EXD1	93	74.661	ENSDORG00000012079	Exd1	100	73.556	Dipodomys_ordii
ENSSSCG00000004752	EXD1	77	74.026	ENSETEG00000014257	-	78	72.778	Echinops_telfairi
ENSSSCG00000004752	EXD1	99	83.613	ENSEASG00005016394	EXD1	100	82.487	Equus_asinus_asinus
ENSSSCG00000004752	EXD1	100	85.289	ENSECAG00000021250	EXD1	100	85.289	Equus_caballus
ENSSSCG00000004752	EXD1	99	71.915	ENSEEUG00000001232	EXD1	99	71.976	Erinaceus_europaeus
ENSSSCG00000004752	EXD1	71	41.791	ENSELUG00000006324	-	67	41.791	Esox_lucius
ENSSSCG00000004752	EXD1	99	85.841	ENSFCAG00000028533	EXD1	99	85.841	Felis_catus
ENSSSCG00000004752	EXD1	57	44.720	ENSGMOG00000015956	-	96	44.681	Gadus_morhua
ENSSSCG00000004752	EXD1	69	53.827	ENSGALG00000041449	EXD1	96	53.827	Gallus_gallus
ENSSSCG00000004752	EXD1	70	41.855	ENSGAFG00000017161	-	72	41.855	Gambusia_affinis
ENSSSCG00000004752	EXD1	99	53.391	ENSGAGG00000019200	EXD1	93	53.391	Gopherus_agassizii
ENSSSCG00000004752	EXD1	100	81.391	ENSGGOG00000004594	EXD1	100	81.565	Gorilla_gorilla
ENSSSCG00000004752	EXD1	53	51.200	ENSHBUG00000017880	-	62	51.200	Haplochromis_burtoni
ENSSSCG00000004752	EXD1	100	75.304	ENSHGLG00000015369	EXD1	100	75.304	Heterocephalus_glaber_female
ENSSSCG00000004752	EXD1	99	74.431	ENSHGLG00100007398	EXD1	100	74.431	Heterocephalus_glaber_male
ENSSSCG00000004752	EXD1	52	48.163	ENSIPUG00000003370	-	70	48.163	Ictalurus_punctatus
ENSSSCG00000004752	EXD1	100	83.826	ENSSTOG00000014980	EXD1	100	83.826	Ictidomys_tridecemlineatus
ENSSSCG00000004752	EXD1	68	45.103	ENSLBEG00000000022	-	66	45.103	Labrus_bergylta
ENSSSCG00000004752	EXD1	71	53.713	ENSLACG00000006680	EXD1	67	53.713	Latimeria_chalumnae
ENSSSCG00000004752	EXD1	68	44.882	ENSLOCG00000012278	-	96	44.882	Lepisosteus_oculatus
ENSSSCG00000004752	EXD1	99	77.895	ENSLAFG00000014739	EXD1	99	78.639	Loxodonta_africana
ENSSSCG00000004752	EXD1	100	81.391	ENSMFAG00000034670	EXD1	100	81.391	Macaca_fascicularis
ENSSSCG00000004752	EXD1	100	81.391	ENSMMUG00000013991	EXD1	100	81.391	Macaca_mulatta
ENSSSCG00000004752	EXD1	100	81.217	ENSMNEG00000037333	EXD1	100	81.217	Macaca_nemestrina
ENSSSCG00000004752	EXD1	60	88.146	ENSMLEG00000033153	EXD1	100	88.146	Mandrillus_leucophaeus
ENSSSCG00000004752	EXD1	51	50.407	ENSMAMG00000006592	exd1	60	50.407	Mastacembelus_armatus
ENSSSCG00000004752	EXD1	69	43.544	ENSMZEG00005009193	-	73	44.051	Maylandia_zebra
ENSSSCG00000004752	EXD1	68	53.518	ENSMGAG00000011179	EXD1	99	53.518	Meleagris_gallopavo
ENSSSCG00000004752	EXD1	99	76.056	ENSMAUG00000002698	Exd1	99	76.056	Mesocricetus_auratus
ENSSSCG00000004752	EXD1	100	83.536	ENSMICG00000014337	EXD1	100	83.536	Microcebus_murinus
ENSSSCG00000004752	EXD1	99	73.592	ENSMOCG00000018151	Exd1	99	73.592	Microtus_ochrogaster
ENSSSCG00000004752	EXD1	90	67.300	ENSMODG00000000164	EXD1	100	67.300	Monodelphis_domestica
ENSSSCG00000004752	EXD1	68	40.519	ENSMALG00000015814	-	83	41.039	Monopterus_albus
ENSSSCG00000004752	EXD1	99	74.913	MGP_CAROLIEiJ_G0024145	Exd1	99	74.913	Mus_caroli
ENSSSCG00000004752	EXD1	99	74.042	ENSMUSG00000048647	Exd1	99	74.042	Mus_musculus
ENSSSCG00000004752	EXD1	99	69.512	MGP_PahariEiJ_G0025588	Exd1	99	69.512	Mus_pahari
ENSSSCG00000004752	EXD1	99	73.693	MGP_SPRETEiJ_G0025061	Exd1	99	73.693	Mus_spretus
ENSSSCG00000004752	EXD1	99	84.248	ENSMPUG00000008811	EXD1	99	84.248	Mustela_putorius_furo
ENSSSCG00000004752	EXD1	100	82.773	ENSMLUG00000001466	EXD1	100	83.650	Myotis_lucifugus
ENSSSCG00000004752	EXD1	99	77.003	ENSNGAG00000002319	Exd1	99	77.003	Nannospalax_galili
ENSSSCG00000004752	EXD1	60	48.239	ENSNBRG00000003229	-	75	48.936	Neolamprologus_brichardi
ENSSSCG00000004752	EXD1	100	80.249	ENSNLEG00000003456	EXD1	99	79.648	Nomascus_leucogenys
ENSSSCG00000004752	EXD1	99	64.389	ENSOPRG00000016433	EXD1	98	65.686	Ochotona_princeps
ENSSSCG00000004752	EXD1	69	42.640	ENSONIG00000012043	-	99	43.147	Oreochromis_niloticus
ENSSSCG00000004752	EXD1	99	74.153	ENSOCUG00000013817	EXD1	99	74.803	Oryctolagus_cuniculus
ENSSSCG00000004752	EXD1	67	43.411	ENSORLG00000026344	-	73	43.411	Oryzias_latipes
ENSSSCG00000004752	EXD1	69	42.494	ENSORLG00020005465	-	75	42.494	Oryzias_latipes_hni
ENSSSCG00000004752	EXD1	69	42.386	ENSORLG00015004848	-	74	42.386	Oryzias_latipes_hsok
ENSSSCG00000004752	EXD1	67	43.782	ENSOMEG00000019812	-	75	43.467	Oryzias_melastigma
ENSSSCG00000004752	EXD1	100	75.726	ENSOGAG00000013095	EXD1	99	75.930	Otolemur_garnettii
ENSSSCG00000004752	EXD1	100	86.911	ENSOARG00000020330	EXD1	100	86.911	Ovis_aries
ENSSSCG00000004752	EXD1	100	81.913	ENSPPAG00000033760	EXD1	100	81.913	Pan_paniscus
ENSSSCG00000004752	EXD1	99	84.956	ENSPPRG00000011128	EXD1	99	84.956	Panthera_pardus
ENSSSCG00000004752	EXD1	99	85.106	ENSPTIG00000020026	EXD1	99	85.106	Panthera_tigris_altaica
ENSSSCG00000004752	EXD1	100	82.087	ENSPTRG00000006941	EXD1	100	82.087	Pan_troglodytes
ENSSSCG00000004752	EXD1	100	81.565	ENSPANG00000019000	EXD1	100	81.565	Papio_anubis
ENSSSCG00000004752	EXD1	69	41.176	ENSPKIG00000000671	-	70	41.176	Paramormyrops_kingsleyae
ENSSSCG00000004752	EXD1	98	51.742	ENSPSIG00000014473	EXD1	92	51.742	Pelodiscus_sinensis
ENSSSCG00000004752	EXD1	69	39.894	ENSPMGG00000015466	-	78	39.894	Periophthalmus_magnuspinnatus
ENSSSCG00000004752	EXD1	74	88.406	ENSPCIG00000027845	EXD1	99	88.406	Phascolarctos_cinereus
ENSSSCG00000004752	EXD1	70	40.299	ENSPFOG00000013673	-	97	40.299	Poecilia_formosa
ENSSSCG00000004752	EXD1	71	41.379	ENSPLAG00000014262	-	73	41.379	Poecilia_latipinna
ENSSSCG00000004752	EXD1	71	41.133	ENSPMEG00000012071	-	73	41.133	Poecilia_mexicana
ENSSSCG00000004752	EXD1	71	40.887	ENSPREG00000019468	-	73	40.887	Poecilia_reticulata
ENSSSCG00000004752	EXD1	100	81.289	ENSPPYG00000006369	EXD1	99	80.626	Pongo_abelii
ENSSSCG00000004752	EXD1	81	71.538	ENSPCAG00000005269	-	75	71.538	Procavia_capensis
ENSSSCG00000004752	EXD1	100	82.310	ENSPCOG00000026598	EXD1	100	82.310	Propithecus_coquereli
ENSSSCG00000004752	EXD1	99	84.388	ENSPVAG00000003149	EXD1	99	83.730	Pteropus_vampyrus
ENSSSCG00000004752	EXD1	69	43.112	ENSPNAG00000008931	exd1	76	43.112	Pygocentrus_nattereri
ENSSSCG00000004752	EXD1	99	73.077	ENSRNOG00000025360	Exd1	99	73.077	Rattus_norvegicus
ENSSSCG00000004752	EXD1	62	88.068	ENSRBIG00000037257	EXD1	100	88.068	Rhinopithecus_bieti
ENSSSCG00000004752	EXD1	100	81.739	ENSRROG00000034491	EXD1	100	81.739	Rhinopithecus_roxellana
ENSSSCG00000004752	EXD1	100	74.520	ENSSBOG00000024842	EXD1	100	74.520	Saimiri_boliviensis_boliviensis
ENSSSCG00000004752	EXD1	92	65.858	ENSSHAG00000016701	EXD1	99	65.858	Sarcophilus_harrisii
ENSSSCG00000004752	EXD1	51	48.780	ENSSMAG00000005451	-	50	48.780	Scophthalmus_maximus
ENSSSCG00000004752	EXD1	67	45.550	ENSSDUG00000004368	exd1	64	45.550	Seriola_dumerili
ENSSSCG00000004752	EXD1	51	53.719	ENSSLDG00000021803	-	51	52.245	Seriola_lalandi_dorsalis
ENSSSCG00000004752	EXD1	99	78.316	ENSSARG00000009556	-	99	77.624	Sorex_araneus
ENSSSCG00000004752	EXD1	98	47.445	ENSSPUG00000001716	EXD1	91	47.445	Sphenodon_punctatus
ENSSSCG00000004752	EXD1	68	39.031	ENSTNIG00000017431	-	93	39.031	Tetraodon_nigroviridis
ENSSSCG00000004752	EXD1	88	68.235	ENSTBEG00000003085	EXD1	99	68.235	Tupaia_belangeri
ENSSSCG00000004752	EXD1	100	88.050	ENSTTRG00000009809	EXD1	99	87.771	Tursiops_truncatus
ENSSSCG00000004752	EXD1	99	85.284	ENSUMAG00000012170	EXD1	99	85.284	Ursus_maritimus
ENSSSCG00000004752	EXD1	99	86.837	ENSVPAG00000007758	EXD1	99	85.799	Vicugna_pacos
ENSSSCG00000004752	EXD1	99	83.717	ENSVVUG00000026704	EXD1	99	83.717	Vulpes_vulpes
ENSSSCG00000004752	EXD1	69	50.000	ENSXETG00000017895	exd1	95	50.000	Xenopus_tropicalis
ENSSSCG00000004752	EXD1	58	41.515	ENSXCOG00000010879	-	84	41.515	Xiphophorus_couchianus
ENSSSCG00000004752	EXD1	58	47.636	ENSXMAG00000014462	-	86	41.441	Xiphophorus_maculatus