EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000005000 (Gene tree)
Gene ID: 100155917
Gene Symbol: FANCM
Alias: FAAP250|KIAA1596
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 111510 bases
Position: chr1:175334141-175445650
Accession: 100155917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000005378	ResIII	PF04851.15	4.1e-18	1	1
ENSSSCP00000035316	ResIII	PF04851.15	6.3e-18	1	1
ENSSSCP00000021205	ResIII	PF04851.15	6.5e-18	1	1
ENSSSCP00000005378	DEAD	PF00270.29	9.9e-16	1	1
ENSSSCP00000035316	DEAD	PF00270.29	1e-15	1	1
ENSSSCP00000021205	DEAD	PF00270.29	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000030082	FANCM-201	8663	-	ENSSSCP00000021205	2067 (aa)	-	I3LAY7
ENSSSCT00000005515	FANCM-203	6033	XM_003480459	ENSSSCP00000005378	2010 (aa)	XP_003480507	F1SI11
ENSSSCT00000061562	FANCM-202	8531	XM_021101202	ENSSSCP00000035316	2023 (aa)	XP_020956861	A0A286ZUZ6

Gene Model

Click here to download ENSSSCG00000005000's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005000	FANCM	99	77.762	ENSG00000187790	FANCM	99	87.592	Homo_sapiens
ENSSSCG00000005000	FANCM	99	79.932	ENSAMEG00000002114	FANCM	99	79.738	Ailuropoda_melanoleuca
ENSSSCG00000005000	FANCM	89	48.115	ENSATEG00000012412	-	86	47.791	Anabas_testudineus
ENSSSCG00000005000	FANCM	99	77.383	ENSANAG00000025075	FANCM	99	77.091	Aotus_nancymaae
ENSSSCG00000005000	FANCM	57	51.646	ENSACLG00000016008	-	71	54.340	Astatotilapia_calliptera
ENSSSCG00000005000	FANCM	66	54.514	ENSAMXG00000020275	-	76	55.006	Astyanax_mexicanus
ENSSSCG00000005000	FANCM	99	78.929	ENSBTAG00000002612	FANCM	95	90.529	Bos_taurus
ENSSSCG00000005000	FANCM	99	76.654	ENSCJAG00000015945	FANCM	99	76.362	Callithrix_jacchus
ENSSSCG00000005000	FANCM	99	79.252	ENSCAFG00000014062	FANCM	99	79.057	Canis_familiaris
ENSSSCG00000005000	FANCM	99	79.221	ENSCHIG00000015176	FANCM	99	79.319	Capra_hircus
ENSSSCG00000005000	FANCM	99	68.765	ENSCPOG00000001446	FANCM	99	68.912	Cavia_porcellus
ENSSSCG00000005000	FANCM	100	74.815	ENSCCAG00000026593	FANCM	100	75.136	Cebus_capucinus
ENSSSCG00000005000	FANCM	99	78.016	ENSCATG00000031379	FANCM	99	77.870	Cercocebus_atys
ENSSSCG00000005000	FANCM	99	78.259	ENSCSAG00000015308	FANCM	99	78.113	Chlorocebus_sabaeus
ENSSSCG00000005000	FANCM	80	81.461	ENSCHOG00000000190	FANCM	82	81.915	Choloepus_hoffmanni
ENSSSCG00000005000	FANCM	98	49.571	ENSCPBG00000015089	FANCM	99	50.428	Chrysemys_picta_bellii
ENSSSCG00000005000	FANCM	99	78.161	ENSCANG00000029498	FANCM	99	78.016	Colobus_angolensis_palliatus
ENSSSCG00000005000	FANCM	99	63.278	ENSCGRG00001023573	Fancm	99	63.084	Cricetulus_griseus_chok1gshd
ENSSSCG00000005000	FANCM	79	47.246	ENSCSEG00000002313	-	71	55.180	Cynoglossus_semilaevis
ENSSSCG00000005000	FANCM	55	58.840	ENSCVAG00000015579	-	63	59.639	Cyprinodon_variegatus
ENSSSCG00000005000	FANCM	99	73.819	ENSDNOG00000007697	FANCM	100	73.819	Dasypus_novemcinctus
ENSSSCG00000005000	FANCM	99	65.646	ENSDORG00000010095	Fancm	99	65.549	Dipodomys_ordii
ENSSSCG00000005000	FANCM	81	84.091	ENSETEG00000003360	FANCM	81	84.091	Echinops_telfairi
ENSSSCG00000005000	FANCM	100	71.330	ENSEASG00005007781	FANCM	99	85.949	Equus_asinus_asinus
ENSSSCG00000005000	FANCM	99	77.183	ENSECAG00000018694	FANCM	87	77.416	Equus_caballus
ENSSSCG00000005000	FANCM	85	66.879	ENSEEUG00000005607	-	92	55.296	Erinaceus_europaeus
ENSSSCG00000005000	FANCM	64	49.494	ENSELUG00000015761	-	65	59.463	Esox_lucius
ENSSSCG00000005000	FANCM	75	63.636	ENSFALG00000001703	FANCM	79	63.723	Ficedula_albicollis
ENSSSCG00000005000	FANCM	100	68.365	ENSFDAG00000009043	FANCM	100	68.268	Fukomys_damarensis
ENSSSCG00000005000	FANCM	62	57.391	ENSGMOG00000002019	-	75	57.160	Gadus_morhua
ENSSSCG00000005000	FANCM	95	45.490	ENSGALG00000031182	FANCM	99	45.146	Gallus_gallus
ENSSSCG00000005000	FANCM	78	48.627	ENSGACG00000009448	-	99	38.314	Gasterosteus_aculeatus
ENSSSCG00000005000	FANCM	99	77.616	ENSGGOG00000008546	FANCM	99	77.470	Gorilla_gorilla
ENSSSCG00000005000	FANCM	56	51.646	ENSHBUG00000007085	-	70	54.340	Haplochromis_burtoni
ENSSSCG00000005000	FANCM	100	70.272	ENSHGLG00000013787	FANCM	99	71.005	Heterocephalus_glaber_female
ENSSSCG00000005000	FANCM	100	70.272	ENSHGLG00100006377	FANCM	99	71.005	Heterocephalus_glaber_male
ENSSSCG00000005000	FANCM	64	49.642	ENSLBEG00000004982	-	72	49.388	Labrus_bergylta
ENSSSCG00000005000	FANCM	94	54.742	ENSLACG00000007739	FANCM	94	54.460	Latimeria_chalumnae
ENSSSCG00000005000	FANCM	79	62.116	ENSLOCG00000011318	FANCM	80	61.823	Lepisosteus_oculatus
ENSSSCG00000005000	FANCM	99	75.400	ENSLAFG00000001136	FANCM	99	75.496	Loxodonta_africana
ENSSSCG00000005000	FANCM	99	77.918	ENSMFAG00000000383	FANCM	99	77.772	Macaca_fascicularis
ENSSSCG00000005000	FANCM	99	77.821	ENSMMUG00000016513	FANCM	99	77.675	Macaca_mulatta
ENSSSCG00000005000	FANCM	99	77.870	ENSMNEG00000038659	FANCM	99	77.724	Macaca_nemestrina
ENSSSCG00000005000	FANCM	97	78.465	ENSMLEG00000035743	FANCM	100	77.723	Mandrillus_leucophaeus
ENSSSCG00000005000	FANCM	72	47.664	ENSMAMG00000007087	-	70	54.839	Mastacembelus_armatus
ENSSSCG00000005000	FANCM	57	51.543	ENSMZEG00005004644	-	71	54.340	Maylandia_zebra
ENSSSCG00000005000	FANCM	100	60.418	ENSMAUG00000015450	Fancm	99	61.232	Mesocricetus_auratus
ENSSSCG00000005000	FANCM	99	76.628	ENSMICG00000005811	FANCM	99	76.433	Microcebus_murinus
ENSSSCG00000005000	FANCM	100	59.700	ENSMOCG00000008775	Fancm	99	60.165	Microtus_ochrogaster
ENSSSCG00000005000	FANCM	61	58.162	ENSMMOG00000010215	-	69	58.162	Mola_mola
ENSSSCG00000005000	FANCM	98	55.967	ENSMODG00000007334	FANCM	98	55.723	Monodelphis_domestica
ENSSSCG00000005000	FANCM	99	62.042	MGP_CAROLIEiJ_G0017791	Fancm	99	62.042	Mus_caroli
ENSSSCG00000005000	FANCM	99	61.420	ENSMUSG00000055884	Fancm	98	79.321	Mus_musculus
ENSSSCG00000005000	FANCM	99	60.695	MGP_PahariEiJ_G0029547	Fancm	99	60.599	Mus_pahari
ENSSSCG00000005000	FANCM	99	61.731	MGP_SPRETEiJ_G0018636	Fancm	99	61.845	Mus_spretus
ENSSSCG00000005000	FANCM	99	78.286	ENSMPUG00000004849	FANCM	99	78.140	Mustela_putorius_furo
ENSSSCG00000005000	FANCM	99	78.394	ENSMLUG00000006671	FANCM	100	78.394	Myotis_lucifugus
ENSSSCG00000005000	FANCM	99	67.282	ENSNGAG00000017199	Fancm	100	66.990	Nannospalax_galili
ENSSSCG00000005000	FANCM	99	77.383	ENSNLEG00000004432	FANCM	99	77.237	Nomascus_leucogenys
ENSSSCG00000005000	FANCM	65	80.282	ENSMEUG00000004977	-	64	80.282	Notamacropus_eugenii
ENSSSCG00000005000	FANCM	81	50.000	ENSONIG00000003531	-	89	49.523	Oreochromis_niloticus
ENSSSCG00000005000	FANCM	94	52.926	ENSOANG00000013997	FANCM	99	53.303	Ornithorhynchus_anatinus
ENSSSCG00000005000	FANCM	99	73.010	ENSOCUG00000007539	FANCM	100	72.621	Oryctolagus_cuniculus
ENSSSCG00000005000	FANCM	51	54.514	ENSORLG00000014503	-	73	54.630	Oryzias_latipes
ENSSSCG00000005000	FANCM	51	54.514	ENSORLG00020013516	-	94	54.745	Oryzias_latipes_hni
ENSSSCG00000005000	FANCM	51	54.577	ENSORLG00015012100	-	79	54.693	Oryzias_latipes_hsok
ENSSSCG00000005000	FANCM	70	54.054	ENSOMEG00000010717	-	92	55.621	Oryzias_melastigma
ENSSSCG00000005000	FANCM	99	72.268	ENSOGAG00000003015	FANCM	99	72.074	Otolemur_garnettii
ENSSSCG00000005000	FANCM	99	79.513	ENSOARG00000009429	FANCM	99	79.611	Ovis_aries
ENSSSCG00000005000	FANCM	99	77.713	ENSPPAG00000028944	FANCM	99	77.567	Pan_paniscus
ENSSSCG00000005000	FANCM	99	77.664	ENSPTRG00000006307	FANCM	99	77.518	Pan_troglodytes
ENSSSCG00000005000	FANCM	99	78.064	ENSPANG00000023200	FANCM	99	77.918	Papio_anubis
ENSSSCG00000005000	FANCM	99	62.009	ENSPEMG00000005619	Fancm	99	61.785	Peromyscus_maniculatus_bairdii
ENSSSCG00000005000	FANCM	73	45.161	ENSPFOG00000002008	-	67	60.082	Poecilia_formosa
ENSSSCG00000005000	FANCM	50	55.800	ENSPLAG00000014164	-	76	55.903	Poecilia_latipinna
ENSSSCG00000005000	FANCM	50	55.671	ENSPMEG00000010746	-	76	55.903	Poecilia_mexicana
ENSSSCG00000005000	FANCM	50	55.220	ENSPREG00000019849	-	87	55.556	Poecilia_reticulata
ENSSSCG00000005000	FANCM	95	78.979	ENSPPYG00000005781	FANCM	99	78.751	Pongo_abelii
ENSSSCG00000005000	FANCM	70	76.119	ENSPCAG00000011363	-	70	76.119	Procavia_capensis
ENSSSCG00000005000	FANCM	99	71.782	ENSPCOG00000014388	FANCM	99	75.631	Propithecus_coquereli
ENSSSCG00000005000	FANCM	73	85.654	ENSPVAG00000015802	FANCM	71	85.408	Pteropus_vampyrus
ENSSSCG00000005000	FANCM	82	49.132	ENSPNAG00000013558	-	84	50.877	Pygocentrus_nattereri
ENSSSCG00000005000	FANCM	99	61.527	ENSRNOG00000056721	Fancm	100	68.046	Rattus_norvegicus
ENSSSCG00000005000	FANCM	99	77.600	ENSRBIG00000011451	FANCM	99	77.454	Rhinopithecus_bieti
ENSSSCG00000005000	FANCM	99	78.113	ENSRROG00000028917	FANCM	99	77.967	Rhinopithecus_roxellana
ENSSSCG00000005000	FANCM	99	76.908	ENSSBOG00000030882	FANCM	99	76.762	Saimiri_boliviensis_boliviensis
ENSSSCG00000005000	FANCM	93	55.339	ENSSHAG00000000507	FANCM	100	55.328	Sarcophilus_harrisii
ENSSSCG00000005000	FANCM	89	48.693	ENSSMAG00000019903	-	99	54.034	Scophthalmus_maximus
ENSSSCG00000005000	FANCM	50	48.521	ENSSDUG00000016682	-	95	61.667	Seriola_dumerili
ENSSSCG00000005000	FANCM	88	48.292	ENSSLDG00000003408	-	76	55.968	Seriola_lalandi_dorsalis
ENSSSCG00000005000	FANCM	82	84.463	ENSSARG00000002618	FANCM	82	84.132	Sorex_araneus
ENSSSCG00000005000	FANCM	82	51.034	ENSTNIG00000017277	-	81	57.953	Tetraodon_nigroviridis
ENSSSCG00000005000	FANCM	99	84.477	ENSTTRG00000006669	FANCM	99	84.331	Tursiops_truncatus
ENSSSCG00000005000	FANCM	73	90.808	ENSVPAG00000005763	FANCM	73	89.972	Vicugna_pacos
ENSSSCG00000005000	FANCM	99	79.068	ENSVVUG00000000357	FANCM	100	78.922	Vulpes_vulpes
ENSSSCG00000005000	FANCM	51	54.638	ENSXMAG00000007702	-	76	55.711	Xiphophorus_maculatus