EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000005227 (Gene tree)
Gene ID: 100152831
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 44360 bases
Position: chr1:218994151-219038510
Accession: 100152831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000005619	CPL	PF08144.11	1.5e-51	1	1
ENSSSCP00000050850	CPL	PF08144.11	1.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000005761	PUM3-201	3609	XM_001927669	ENSSSCP00000005619	648 (aa)	XP_001927704	F1SJG9
ENSSSCT00000038806	PUM3-202	4079	-	ENSSSCP00000050850	550 (aa)	-	A0A287B403

Gene Model

Click here to download ENSSSCG00000005227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005227	PUM3	99	91.575	ENSG00000080608	PUM3	100	91.512	Homo_sapiens
ENSSSCG00000005227	PUM3	99	53.263	ENSAPOG00000020252	pum3	98	54.574	Acanthochromis_polyacanthus
ENSSSCG00000005227	PUM3	99	93.045	ENSAMEG00000012187	PUM3	100	93.045	Ailuropoda_melanoleuca
ENSSSCG00000005227	PUM3	84	57.273	ENSACIG00000009786	pum3	88	57.815	Amphilophus_citrinellus
ENSSSCG00000005227	PUM3	99	54.021	ENSAOCG00000004439	pum3	98	55.363	Amphiprion_ocellaris
ENSSSCG00000005227	PUM3	99	54.021	ENSAPEG00000020523	pum3	98	55.363	Amphiprion_percula
ENSSSCG00000005227	PUM3	87	59.758	ENSATEG00000005799	pum3	98	56.894	Anabas_testudineus
ENSSSCG00000005227	PUM3	96	73.913	ENSAPLG00000002920	PUM3	99	73.913	Anas_platyrhynchos
ENSSSCG00000005227	PUM3	99	69.908	ENSACAG00000003174	PUM3	96	71.945	Anolis_carolinensis
ENSSSCG00000005227	PUM3	99	92.294	ENSANAG00000024520	PUM3	100	91.963	Aotus_nancymaae
ENSSSCG00000005227	PUM3	99	54.559	ENSACLG00000001017	pum3	99	55.708	Astatotilapia_calliptera
ENSSSCG00000005227	PUM3	95	63.578	ENSAMXG00000020911	pum3	98	63.578	Astyanax_mexicanus
ENSSSCG00000005227	PUM3	99	93.818	ENSBTAG00000013357	PUM3	100	93.818	Bos_taurus
ENSSSCG00000005227	PUM3	75	31.791	WBGene00014165	puf-12	64	31.791	Caenorhabditis_elegans
ENSSSCG00000005227	PUM3	99	91.376	ENSCJAG00000010917	PUM3	100	90.881	Callithrix_jacchus
ENSSSCG00000005227	PUM3	100	93.210	ENSCAFG00000002035	PUM3	100	93.210	Canis_familiaris
ENSSSCG00000005227	PUM3	100	93.056	ENSCAFG00020026867	PUM3	100	93.056	Canis_lupus_dingo
ENSSSCG00000005227	PUM3	99	93.945	ENSCHIG00000021559	PUM3	100	93.818	Capra_hircus
ENSSSCG00000005227	PUM3	99	91.345	ENSTSYG00000007481	PUM3	100	91.345	Carlito_syrichta
ENSSSCG00000005227	PUM3	99	88.095	ENSCAPG00000010592	-	97	86.867	Cavia_aperea
ENSSSCG00000005227	PUM3	100	87.809	ENSCPOG00000008552	-	97	88.748	Cavia_porcellus
ENSSSCG00000005227	PUM3	99	90.726	ENSCCAG00000032650	PUM3	100	90.726	Cebus_capucinus
ENSSSCG00000005227	PUM3	99	93.578	ENSCATG00000024880	PUM3	100	93.199	Cercocebus_atys
ENSSSCG00000005227	PUM3	100	89.815	ENSCLAG00000011892	PUM3	100	89.815	Chinchilla_lanigera
ENSSSCG00000005227	PUM3	99	93.028	ENSCSAG00000008691	PUM3	100	92.581	Chlorocebus_sabaeus
ENSSSCG00000005227	PUM3	100	71.451	ENSCHOG00000002535	PUM3	95	71.451	Choloepus_hoffmanni
ENSSSCG00000005227	PUM3	99	73.107	ENSCPBG00000025470	PUM3	92	73.333	Chrysemys_picta_bellii
ENSSSCG00000005227	PUM3	81	40.129	ENSCING00000024199	-	96	39.963	Ciona_intestinalis
ENSSSCG00000005227	PUM3	91	39.274	ENSCSAVG00000006072	-	99	40.762	Ciona_savignyi
ENSSSCG00000005227	PUM3	99	92.661	ENSCANG00000006142	PUM3	100	92.272	Colobus_angolensis_palliatus
ENSSSCG00000005227	PUM3	100	89.660	ENSCGRG00001016402	Pum3	100	89.660	Cricetulus_griseus_chok1gshd
ENSSSCG00000005227	PUM3	100	89.660	ENSCGRG00000010207	Pum3	100	89.660	Cricetulus_griseus_crigri
ENSSSCG00000005227	PUM3	99	56.137	ENSCSEG00000001565	pum3	97	57.544	Cynoglossus_semilaevis
ENSSSCG00000005227	PUM3	60	52.788	ENSCVAG00000006550	pum3	94	52.593	Cyprinodon_variegatus
ENSSSCG00000005227	PUM3	93	67.044	ENSDARG00000087779	pum3	98	67.044	Danio_rerio
ENSSSCG00000005227	PUM3	100	79.570	ENSDNOG00000008157	PUM3	70	79.969	Dasypus_novemcinctus
ENSSSCG00000005227	PUM3	85	85.185	ENSETEG00000015331	PUM3	84	84.066	Echinops_telfairi
ENSSSCG00000005227	PUM3	80	40.341	ENSEBUG00000011586	pum3	75	41.061	Eptatretus_burgeri
ENSSSCG00000005227	PUM3	99	94.128	ENSEASG00005010350	PUM3	100	93.818	Equus_asinus_asinus
ENSSSCG00000005227	PUM3	99	94.312	ENSECAG00000017193	PUM3	100	93.972	Equus_caballus
ENSSSCG00000005227	PUM3	99	82.936	ENSEEUG00000010314	PUM3	100	84.080	Erinaceus_europaeus
ENSSSCG00000005227	PUM3	97	62.187	ENSELUG00000002215	pum3	98	62.382	Esox_lucius
ENSSSCG00000005227	PUM3	99	72.546	ENSFALG00000010509	PUM3	96	73.726	Ficedula_albicollis
ENSSSCG00000005227	PUM3	100	89.969	ENSFDAG00000021027	PUM3	100	89.969	Fukomys_damarensis
ENSSSCG00000005227	PUM3	95	62.057	ENSFHEG00000015576	pum3	92	60.471	Fundulus_heteroclitus
ENSSSCG00000005227	PUM3	83	61.194	ENSGMOG00000014217	pum3	99	61.194	Gadus_morhua
ENSSSCG00000005227	PUM3	99	70.968	ENSGALG00000010178	PUM3	96	72.249	Gallus_gallus
ENSSSCG00000005227	PUM3	57	59.416	ENSGAFG00000001930	pum3	64	59.416	Gambusia_affinis
ENSSSCG00000005227	PUM3	82	60.640	ENSGACG00000017878	pum3	97	60.681	Gasterosteus_aculeatus
ENSSSCG00000005227	PUM3	99	72.643	ENSGAGG00000018983	PUM3	98	73.667	Gopherus_agassizii
ENSSSCG00000005227	PUM3	99	92.294	ENSGGOG00000006143	PUM3	100	92.117	Gorilla_gorilla
ENSSSCG00000005227	PUM3	99	50.307	ENSHBUG00000012903	pum3	99	50.853	Haplochromis_burtoni
ENSSSCG00000005227	PUM3	100	89.660	ENSHGLG00000015868	-	100	89.660	Heterocephalus_glaber_female
ENSSSCG00000005227	PUM3	100	89.660	ENSHGLG00100018825	PUM3	100	89.799	Heterocephalus_glaber_male
ENSSSCG00000005227	PUM3	98	55.416	ENSHCOG00000010306	pum3	93	56.508	Hippocampus_comes
ENSSSCG00000005227	PUM3	87	68.850	ENSIPUG00000024801	pum3	98	64.353	Ictalurus_punctatus
ENSSSCG00000005227	PUM3	100	92.438	ENSSTOG00000009586	PUM3	100	92.438	Ictidomys_tridecemlineatus
ENSSSCG00000005227	PUM3	99	88.645	ENSJJAG00000012563	Pum3	99	88.099	Jaculus_jaculus
ENSSSCG00000005227	PUM3	99	54.697	ENSKMAG00000010277	pum3	98	55.450	Kryptolebias_marmoratus
ENSSSCG00000005227	PUM3	99	53.743	ENSLBEG00000012213	pum3	90	57.191	Labrus_bergylta
ENSSSCG00000005227	PUM3	99	67.381	ENSLACG00000008312	PUM3	98	67.555	Latimeria_chalumnae
ENSSSCG00000005227	PUM3	99	66.770	ENSLOCG00000012529	pum3	93	70.234	Lepisosteus_oculatus
ENSSSCG00000005227	PUM3	100	89.198	ENSLAFG00000017341	PUM3	100	89.198	Loxodonta_africana
ENSSSCG00000005227	PUM3	99	92.844	ENSMFAG00000001430	PUM3	100	92.581	Macaca_fascicularis
ENSSSCG00000005227	PUM3	99	92.844	ENSMMUG00000002362	PUM3	99	92.581	Macaca_mulatta
ENSSSCG00000005227	PUM3	99	92.844	ENSMNEG00000035288	PUM3	100	92.581	Macaca_nemestrina
ENSSSCG00000005227	PUM3	99	93.394	ENSMLEG00000034820	PUM3	100	93.045	Mandrillus_leucophaeus
ENSSSCG00000005227	PUM3	82	61.423	ENSMAMG00000022861	pum3	98	56.044	Mastacembelus_armatus
ENSSSCG00000005227	PUM3	97	55.743	ENSMZEG00005014205	pum3	97	55.590	Maylandia_zebra
ENSSSCG00000005227	PUM3	99	65.399	ENSMGAG00000002255	PUM3	98	64.799	Meleagris_gallopavo
ENSSSCG00000005227	PUM3	100	89.198	ENSMAUG00000009733	Pum3	100	89.198	Mesocricetus_auratus
ENSSSCG00000005227	PUM3	99	92.105	ENSMICG00000045916	PUM3	87	92.105	Microcebus_murinus
ENSSSCG00000005227	PUM3	99	84.853	ENSMOCG00000014830	-	100	84.853	Microtus_ochrogaster
ENSSSCG00000005227	PUM3	100	89.198	ENSMOCG00000019519	-	100	89.198	Microtus_ochrogaster
ENSSSCG00000005227	PUM3	89	58.058	ENSMMOG00000012184	pum3	98	53.659	Mola_mola
ENSSSCG00000005227	PUM3	99	69.626	ENSMODG00000015417	PUM3	82	79.082	Monodelphis_domestica
ENSSSCG00000005227	PUM3	99	53.614	ENSMALG00000022164	pum3	93	54.711	Monopterus_albus
ENSSSCG00000005227	PUM3	100	88.272	MGP_CAROLIEiJ_G0022845	Pum3	100	88.272	Mus_caroli
ENSSSCG00000005227	PUM3	100	88.272	ENSMUSG00000041360	Pum3	100	88.272	Mus_musculus
ENSSSCG00000005227	PUM3	99	89.377	MGP_PahariEiJ_G0014338	Pum3	99	88.717	Mus_pahari
ENSSSCG00000005227	PUM3	100	88.117	MGP_SPRETEiJ_G0023763	Pum3	100	88.117	Mus_spretus
ENSSSCG00000005227	PUM3	99	90.642	ENSMPUG00000005125	PUM3	100	89.954	Mustela_putorius_furo
ENSSSCG00000005227	PUM3	99	91.950	ENSMLUG00000002309	PUM3	99	91.950	Myotis_lucifugus
ENSSSCG00000005227	PUM3	99	87.519	ENSNGAG00000019468	Pum3	100	87.519	Nannospalax_galili
ENSSSCG00000005227	PUM3	91	55.092	ENSNBRG00000021370	pum3	94	55.092	Neolamprologus_brichardi
ENSSSCG00000005227	PUM3	99	92.294	ENSNLEG00000008712	PUM3	100	92.117	Nomascus_leucogenys
ENSSSCG00000005227	PUM3	78	61.305	ENSMEUG00000013606	-	99	60.636	Notamacropus_eugenii
ENSSSCG00000005227	PUM3	85	77.186	ENSOPRG00000004225	-	79	77.186	Ochotona_princeps
ENSSSCG00000005227	PUM3	100	89.352	ENSODEG00000003625	-	100	89.352	Octodon_degus
ENSSSCG00000005227	PUM3	99	83.846	ENSODEG00000016477	-	100	83.846	Octodon_degus
ENSSSCG00000005227	PUM3	99	53.144	ENSONIG00000012733	pum3	99	54.186	Oreochromis_niloticus
ENSSSCG00000005227	PUM3	77	82.824	ENSOANG00000014995	PUM3	100	79.197	Ornithorhynchus_anatinus
ENSSSCG00000005227	PUM3	99	90.826	ENSOCUG00000004189	-	100	90.572	Oryctolagus_cuniculus
ENSSSCG00000005227	PUM3	99	89.668	ENSOCUG00000026104	-	98	90.016	Oryctolagus_cuniculus
ENSSSCG00000005227	PUM3	99	52.266	ENSORLG00000014935	pum3	99	53.115	Oryzias_latipes
ENSSSCG00000005227	PUM3	89	55.312	ENSORLG00020002841	pum3	99	53.115	Oryzias_latipes_hni
ENSSSCG00000005227	PUM3	99	52.190	ENSORLG00015015906	pum3	99	52.960	Oryzias_latipes_hsok
ENSSSCG00000005227	PUM3	91	55.058	ENSOMEG00000009427	pum3	95	54.545	Oryzias_melastigma
ENSSSCG00000005227	PUM3	99	90.123	ENSOGAG00000008125	-	100	90.123	Otolemur_garnettii
ENSSSCG00000005227	PUM3	99	66.972	ENSOGAG00000033481	-	97	66.823	Otolemur_garnettii
ENSSSCG00000005227	PUM3	99	93.419	ENSOARG00000013337	PUM3	100	93.374	Ovis_aries
ENSSSCG00000005227	PUM3	99	92.125	ENSPPAG00000041337	PUM3	100	91.975	Pan_paniscus
ENSSSCG00000005227	PUM3	99	90.108	ENSPPRG00000000809	PUM3	100	90.108	Panthera_pardus
ENSSSCG00000005227	PUM3	99	90.572	ENSPTIG00000021934	PUM3	100	90.572	Panthera_tigris_altaica
ENSSSCG00000005227	PUM3	99	92.308	ENSPTRG00000020735	PUM3	100	92.130	Pan_troglodytes
ENSSSCG00000005227	PUM3	99	93.211	ENSPANG00000025118	PUM3	100	92.736	Papio_anubis
ENSSSCG00000005227	PUM3	99	64.991	ENSPKIG00000022249	pum3	96	66.389	Paramormyrops_kingsleyae
ENSSSCG00000005227	PUM3	99	72.477	ENSPSIG00000016272	PUM3	97	72.540	Pelodiscus_sinensis
ENSSSCG00000005227	PUM3	76	61.507	ENSPMGG00000021261	pum3	98	61.507	Periophthalmus_magnuspinnatus
ENSSSCG00000005227	PUM3	89	87.736	ENSPEMG00000019340	-	100	87.736	Peromyscus_maniculatus_bairdii
ENSSSCG00000005227	PUM3	91	77.889	ENSPCIG00000030598	PUM3	91	77.889	Phascolarctos_cinereus
ENSSSCG00000005227	PUM3	86	58.214	ENSPFOG00000001719	pum3	92	58.214	Poecilia_formosa
ENSSSCG00000005227	PUM3	91	55.116	ENSPLAG00000020010	pum3	95	56.106	Poecilia_latipinna
ENSSSCG00000005227	PUM3	91	55.116	ENSPMEG00000017451	pum3	95	56.106	Poecilia_mexicana
ENSSSCG00000005227	PUM3	60	46.759	ENSPREG00000019478	-	69	64.737	Poecilia_reticulata
ENSSSCG00000005227	PUM3	99	93.028	ENSPPYG00000019255	PUM3	100	92.581	Pongo_abelii
ENSSSCG00000005227	PUM3	100	77.160	ENSPCAG00000005797	PUM3	95	77.160	Procavia_capensis
ENSSSCG00000005227	PUM3	99	92.272	ENSPCOG00000027325	PUM3	100	92.272	Propithecus_coquereli
ENSSSCG00000005227	PUM3	100	90.278	ENSPVAG00000016135	PUM3	95	90.278	Pteropus_vampyrus
ENSSSCG00000005227	PUM3	95	56.299	ENSPNYG00000016124	pum3	99	56.143	Pundamilia_nyererei
ENSSSCG00000005227	PUM3	93	64.532	ENSPNAG00000026524	pum3	97	64.532	Pygocentrus_nattereri
ENSSSCG00000005227	PUM3	99	86.606	ENSRNOG00000048356	RGD1308750	100	86.244	Rattus_norvegicus
ENSSSCG00000005227	PUM3	99	86.606	ENSRNOG00000012574	Pum3	100	86.553	Rattus_norvegicus
ENSSSCG00000005227	PUM3	99	92.477	ENSRBIG00000036924	PUM3	100	91.963	Rhinopithecus_bieti
ENSSSCG00000005227	PUM3	99	92.477	ENSRROG00000041089	PUM3	100	92.117	Rhinopithecus_roxellana
ENSSSCG00000005227	PUM3	99	92.477	ENSSBOG00000028066	PUM3	100	92.117	Saimiri_boliviensis_boliviensis
ENSSSCG00000005227	PUM3	99	79.045	ENSSHAG00000003730	PUM3	100	79.045	Sarcophilus_harrisii
ENSSSCG00000005227	PUM3	99	64.771	ENSSFOG00015018778	pum3	96	66.397	Scleropages_formosus
ENSSSCG00000005227	PUM3	82	62.147	ENSSMAG00000013236	pum3	99	56.037	Scophthalmus_maximus
ENSSSCG00000005227	PUM3	99	54.627	ENSSDUG00000001887	pum3	97	56.192	Seriola_dumerili
ENSSSCG00000005227	PUM3	99	54.819	ENSSLDG00000015766	pum3	99	56.154	Seriola_lalandi_dorsalis
ENSSSCG00000005227	PUM3	96	88.045	ENSSARG00000000579	PUM3	100	88.045	Sorex_araneus
ENSSSCG00000005227	PUM3	97	71.086	ENSSPUG00000001707	PUM3	97	71.086	Sphenodon_punctatus
ENSSSCG00000005227	PUM3	99	53.881	ENSSPAG00000003976	pum3	99	54.545	Stegastes_partitus
ENSSSCG00000005227	PUM3	99	72.025	ENSTGUG00000005339	PUM3	97	72.611	Taeniopygia_guttata
ENSSSCG00000005227	PUM3	99	54.505	ENSTRUG00000004074	pum3	97	55.814	Takifugu_rubripes
ENSSSCG00000005227	PUM3	90	59.622	ENSTNIG00000010325	pum3	96	59.635	Tetraodon_nigroviridis
ENSSSCG00000005227	PUM3	86	71.095	ENSTBEG00000013058	PUM3	86	71.095	Tupaia_belangeri
ENSSSCG00000005227	PUM3	100	86.265	ENSTTRG00000001062	PUM3	96	86.265	Tursiops_truncatus
ENSSSCG00000005227	PUM3	100	84.105	ENSUMAG00000018443	PUM3	99	87.547	Ursus_maritimus
ENSSSCG00000005227	PUM3	100	93.837	ENSVPAG00000010766	PUM3	99	93.837	Vicugna_pacos
ENSSSCG00000005227	PUM3	100	93.210	ENSVVUG00000006527	PUM3	100	93.210	Vulpes_vulpes
ENSSSCG00000005227	PUM3	99	63.553	ENSXETG00000011707	pum3	96	59.713	Xenopus_tropicalis
ENSSSCG00000005227	PUM3	91	54.090	ENSXCOG00000006725	pum3	99	53.846	Xiphophorus_couchianus
ENSSSCG00000005227	PUM3	91	55.372	ENSXMAG00000002926	pum3	95	55.372	Xiphophorus_maculatus