EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000005274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 282 bases
Position: chr1:154048684-154048965
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000005665	Ribosomal_S6e	PF01092.19	4.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000005809	-	282	-	ENSSSCP00000005665	93 (aa)	-	F1SJA1

Gene Model

Click here to download ENSSSCG00000005274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000005274	-	88	69.512	ENSSSCG00000039349	-	99	62.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005274	-	100	81.720	ENSG00000137154	RPS6	58	71.698	Homo_sapiens
ENSSSCG00000005274	-	100	67.742	ENSAMEG00000019976	-	89	67.742	Ailuropoda_melanoleuca
ENSSSCG00000005274	-	100	62.366	ENSANAG00000008532	-	79	62.366	Aotus_nancymaae
ENSSSCG00000005274	-	100	76.596	ENSBTAG00000026063	-	75	76.596	Bos_taurus
ENSSSCG00000005274	-	76	67.606	ENSCAFG00020016382	-	66	67.606	Canis_lupus_dingo
ENSSSCG00000005274	-	100	72.043	ENSCHIG00000023715	-	75	75.385	Capra_hircus
ENSSSCG00000005274	-	100	80.645	ENSCHIG00000023357	-	82	80.645	Capra_hircus
ENSSSCG00000005274	-	70	53.846	ENSCHIG00000016884	-	81	53.846	Capra_hircus
ENSSSCG00000005274	-	99	76.087	ENSCCAG00000034887	-	80	76.087	Cebus_capucinus
ENSSSCG00000005274	-	100	80.645	ENSCCAG00000027404	-	72	80.645	Cebus_capucinus
ENSSSCG00000005274	-	99	81.522	ENSCCAG00000027222	-	81	81.522	Cebus_capucinus
ENSSSCG00000005274	-	100	81.720	ENSCATG00000034999	RPS6	58	71.698	Cercocebus_atys
ENSSSCG00000005274	-	100	80.645	ENSCANG00000028062	-	82	80.645	Colobus_angolensis_palliatus
ENSSSCG00000005274	-	100	81.720	ENSCANG00000030897	-	82	81.720	Colobus_angolensis_palliatus
ENSSSCG00000005274	-	100	81.720	ENSCANG00000016699	-	58	71.698	Colobus_angolensis_palliatus
ENSSSCG00000005274	-	100	78.495	ENSCANG00000026175	-	82	78.495	Colobus_angolensis_palliatus
ENSSSCG00000005274	-	100	81.720	ENSCGRG00000004351	-	68	81.720	Cricetulus_griseus_crigri
ENSSSCG00000005274	-	88	56.098	ENSECAG00000021587	-	59	56.098	Equus_caballus
ENSSSCG00000005274	-	95	70.455	ENSLAFG00000029118	-	74	70.455	Loxodonta_africana
ENSSSCG00000005274	-	100	81.720	ENSMFAG00000044377	-	74	59.322	Macaca_fascicularis
ENSSSCG00000005274	-	100	75.269	ENSMFAG00000030864	-	60	75.269	Macaca_fascicularis
ENSSSCG00000005274	-	100	76.344	ENSMMUG00000007949	-	65	76.344	Macaca_mulatta
ENSSSCG00000005274	-	100	81.720	ENSMNEG00000036926	-	82	81.720	Macaca_nemestrina
ENSSSCG00000005274	-	100	76.344	ENSMLEG00000039052	-	90	76.344	Mandrillus_leucophaeus
ENSSSCG00000005274	-	100	81.720	ENSMAUG00000016545	-	71	81.720	Mesocricetus_auratus
ENSSSCG00000005274	-	62	75.862	ENSMICG00000049299	-	64	75.862	Microcebus_murinus
ENSSSCG00000005274	-	99	73.913	ENSMICG00000046250	-	81	73.913	Microcebus_murinus
ENSSSCG00000005274	-	88	81.707	ENSMICG00000038120	-	72	81.707	Microcebus_murinus
ENSSSCG00000005274	-	94	66.667	ENSMODG00000024014	-	84	66.667	Monodelphis_domestica
ENSSSCG00000005274	-	100	65.591	ENSMPUG00000016013	-	80	65.591	Mustela_putorius_furo
ENSSSCG00000005274	-	69	71.875	ENSMLUG00000029738	-	100	71.875	Myotis_lucifugus
ENSSSCG00000005274	-	90	77.381	ENSNLEG00000026926	-	81	77.174	Nomascus_leucogenys
ENSSSCG00000005274	-	100	67.742	ENSNLEG00000031450	-	80	67.742	Nomascus_leucogenys
ENSSSCG00000005274	-	98	82.418	ENSOPRG00000012290	-	65	82.418	Ochotona_princeps
ENSSSCG00000005274	-	100	76.344	ENSPPAG00000041954	-	84	76.344	Pan_paniscus
ENSSSCG00000005274	-	100	75.269	ENSPPAG00000027144	-	81	75.269	Pan_paniscus
ENSSSCG00000005274	-	60	69.643	ENSPPRG00000008618	-	81	69.643	Panthera_pardus
ENSSSCG00000005274	-	99	70.652	ENSPPRG00000009217	-	84	70.652	Panthera_pardus
ENSSSCG00000005274	-	100	59.140	ENSPPRG00000023888	-	69	59.140	Panthera_pardus
ENSSSCG00000005274	-	70	80.000	ENSPTIG00000003205	-	63	80.000	Panthera_tigris_altaica
ENSSSCG00000005274	-	100	65.591	ENSPTIG00000009305	-	69	65.591	Panthera_tigris_altaica
ENSSSCG00000005274	-	100	80.645	ENSPTRG00000048333	-	81	80.645	Pan_troglodytes
ENSSSCG00000005274	-	100	75.269	ENSPTRG00000050726	-	81	75.269	Pan_troglodytes
ENSSSCG00000005274	-	85	70.886	ENSPCIG00000009027	-	98	70.886	Phascolarctos_cinereus
ENSSSCG00000005274	-	81	64.000	ENSPCIG00000003624	-	81	64.000	Phascolarctos_cinereus
ENSSSCG00000005274	-	100	75.269	ENSPCOG00000023650	-	62	75.269	Propithecus_coquereli
ENSSSCG00000005274	-	100	75.269	ENSPCOG00000015089	-	82	75.269	Propithecus_coquereli
ENSSSCG00000005274	-	100	73.118	ENSPCOG00000016415	-	82	73.118	Propithecus_coquereli
ENSSSCG00000005274	-	70	64.615	ENSRNOG00000047774	AABR07059478.1	93	64.615	Rattus_norvegicus
ENSSSCG00000005274	-	100	68.817	ENSRBIG00000023247	-	79	68.817	Rhinopithecus_bieti
ENSSSCG00000005274	-	100	77.419	ENSRBIG00000029895	-	82	77.419	Rhinopithecus_bieti
ENSSSCG00000005274	-	100	81.720	ENSRROG00000004484	-	82	81.720	Rhinopithecus_roxellana
ENSSSCG00000005274	-	100	66.667	ENSRROG00000029835	-	79	66.667	Rhinopithecus_roxellana
ENSSSCG00000005274	-	100	81.720	ENSRROG00000014334	-	82	81.720	Rhinopithecus_roxellana
ENSSSCG00000005274	-	100	81.720	ENSRROG00000016846	-	83	81.720	Rhinopithecus_roxellana
ENSSSCG00000005274	-	86	66.250	ENSRROG00000045811	-	69	66.250	Rhinopithecus_roxellana
ENSSSCG00000005274	-	100	80.645	ENSSBOG00000023761	-	82	80.645	Saimiri_boliviensis_boliviensis
ENSSSCG00000005274	-	85	56.098	ENSUAMG00000003587	-	96	56.098	Ursus_americanus
ENSSSCG00000005274	-	73	66.667	ENSUMAG00000001853	-	92	66.667	Ursus_maritimus
ENSSSCG00000005274	-	100	67.742	ENSUMAG00000014126	-	84	67.742	Ursus_maritimus
ENSSSCG00000005274	-	71	77.273	ENSVVUG00000005333	-	80	77.273	Vulpes_vulpes
ENSSSCG00000005274	-	82	60.526	ENSVVUG00000011106	-	93	60.526	Vulpes_vulpes