EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000005347 (Gene tree)
Gene ID: 100156445
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 22855 bases
Position: chr1:238197666-238220520
Accession: 100156445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000005740	RNA_pol_I_A49	PF06870.12	8.4e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000005886	POLR1E-201	2740	XM_021066147	ENSSSCP00000005740	419 (aa)	XP_020921806	F1ST74

Gene Model

Click here to download ENSSSCG00000005347's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005347	POLR1E	100	88.067	ENSG00000137054	POLR1E	100	88.067	Homo_sapiens
ENSSSCG00000005347	POLR1E	98	42.029	ENSAPOG00000012452	polr1e	99	42.029	Acanthochromis_polyacanthus
ENSSSCG00000005347	POLR1E	100	80.860	ENSAMEG00000010193	POLR1E	97	80.860	Ailuropoda_melanoleuca
ENSSSCG00000005347	POLR1E	94	42.822	ENSACIG00000009884	polr1e	99	43.655	Amphilophus_citrinellus
ENSSSCG00000005347	POLR1E	98	44.444	ENSAOCG00000005665	polr1e	99	44.444	Amphiprion_ocellaris
ENSSSCG00000005347	POLR1E	98	44.203	ENSAPEG00000020581	polr1e	99	44.203	Amphiprion_percula
ENSSSCG00000005347	POLR1E	98	45.652	ENSATEG00000020609	polr1e	99	45.652	Anabas_testudineus
ENSSSCG00000005347	POLR1E	80	56.168	ENSAPLG00000010340	POLR1E	100	56.168	Anas_platyrhynchos
ENSSSCG00000005347	POLR1E	100	88.783	ENSANAG00000038046	POLR1E	100	88.783	Aotus_nancymaae
ENSSSCG00000005347	POLR1E	99	43.059	ENSACLG00000013685	polr1e	99	43.059	Astatotilapia_calliptera
ENSSSCG00000005347	POLR1E	97	42.651	ENSAMXG00000018181	polr1e	98	42.651	Astyanax_mexicanus
ENSSSCG00000005347	POLR1E	100	90.931	ENSBTAG00000012243	POLR1E	100	90.931	Bos_taurus
ENSSSCG00000005347	POLR1E	95	83.081	ENSCJAG00000010512	POLR1E	93	87.968	Callithrix_jacchus
ENSSSCG00000005347	POLR1E	100	91.408	ENSCAFG00000002377	POLR1E	100	91.408	Canis_familiaris
ENSSSCG00000005347	POLR1E	100	91.647	ENSCAFG00020017851	POLR1E	100	91.647	Canis_lupus_dingo
ENSSSCG00000005347	POLR1E	100	89.737	ENSCHIG00000019479	POLR1E	100	89.737	Capra_hircus
ENSSSCG00000005347	POLR1E	100	87.351	ENSTSYG00000002075	POLR1E	100	87.351	Carlito_syrichta
ENSSSCG00000005347	POLR1E	69	86.806	ENSCAPG00000015653	POLR1E	99	86.806	Cavia_aperea
ENSSSCG00000005347	POLR1E	99	86.842	ENSCPOG00000009965	POLR1E	100	86.842	Cavia_porcellus
ENSSSCG00000005347	POLR1E	100	81.146	ENSCCAG00000029460	POLR1E	100	81.146	Cebus_capucinus
ENSSSCG00000005347	POLR1E	100	87.351	ENSCATG00000031732	POLR1E	100	88.136	Cercocebus_atys
ENSSSCG00000005347	POLR1E	87	89.344	ENSCLAG00000012701	POLR1E	96	89.344	Chinchilla_lanigera
ENSSSCG00000005347	POLR1E	100	86.874	ENSCSAG00000010782	POLR1E	100	86.874	Chlorocebus_sabaeus
ENSSSCG00000005347	POLR1E	95	78.030	ENSCHOG00000013024	POLR1E	83	78.030	Choloepus_hoffmanni
ENSSSCG00000005347	POLR1E	98	66.667	ENSCPBG00000006923	POLR1E	99	67.397	Chrysemys_picta_bellii
ENSSSCG00000005347	POLR1E	100	86.874	ENSCANG00000036112	POLR1E	100	87.946	Colobus_angolensis_palliatus
ENSSSCG00000005347	POLR1E	100	82.578	ENSCGRG00001006197	Polr1e	97	82.578	Cricetulus_griseus_chok1gshd
ENSSSCG00000005347	POLR1E	100	82.100	ENSCGRG00000006430	Polr1e	97	82.100	Cricetulus_griseus_crigri
ENSSSCG00000005347	POLR1E	94	43.544	ENSCSEG00000005121	polr1e	96	43.544	Cynoglossus_semilaevis
ENSSSCG00000005347	POLR1E	98	42.271	ENSCVAG00000019759	polr1e	99	42.271	Cyprinodon_variegatus
ENSSSCG00000005347	POLR1E	94	44.081	ENSDARG00000006434	polr1e	99	43.341	Danio_rerio
ENSSSCG00000005347	POLR1E	100	77.991	ENSDNOG00000010257	POLR1E	99	77.991	Dasypus_novemcinctus
ENSSSCG00000005347	POLR1E	85	80.726	ENSETEG00000018204	POLR1E	99	80.726	Echinops_telfairi
ENSSSCG00000005347	POLR1E	100	91.647	ENSEASG00005000675	POLR1E	100	91.647	Equus_asinus_asinus
ENSSSCG00000005347	POLR1E	100	91.885	ENSECAG00000014669	POLR1E	100	91.885	Equus_caballus
ENSSSCG00000005347	POLR1E	95	74.559	ENSEEUG00000011928	POLR1E	84	74.747	Erinaceus_europaeus
ENSSSCG00000005347	POLR1E	97	46.078	ENSELUG00000008150	polr1e	97	46.078	Esox_lucius
ENSSSCG00000005347	POLR1E	100	89.976	ENSFCAG00000013081	POLR1E	100	89.976	Felis_catus
ENSSSCG00000005347	POLR1E	94	60.152	ENSFALG00000012950	POLR1E	99	60.152	Ficedula_albicollis
ENSSSCG00000005347	POLR1E	99	87.081	ENSFDAG00000016917	POLR1E	100	87.081	Fukomys_damarensis
ENSSSCG00000005347	POLR1E	98	43.341	ENSFHEG00000009801	polr1e	99	43.341	Fundulus_heteroclitus
ENSSSCG00000005347	POLR1E	97	38.257	ENSGMOG00000003336	POLR1E	97	39.130	Gadus_morhua
ENSSSCG00000005347	POLR1E	99	62.802	ENSGALG00000005395	POLR1E	100	62.802	Gallus_gallus
ENSSSCG00000005347	POLR1E	98	44.203	ENSGAFG00000004850	polr1e	99	44.203	Gambusia_affinis
ENSSSCG00000005347	POLR1E	98	41.007	ENSGACG00000016087	polr1e	99	41.007	Gasterosteus_aculeatus
ENSSSCG00000005347	POLR1E	98	60.097	ENSGAGG00000001659	POLR1E	98	60.145	Gopherus_agassizii
ENSSSCG00000005347	POLR1E	100	87.828	ENSGGOG00000001882	POLR1E	100	87.828	Gorilla_gorilla
ENSSSCG00000005347	POLR1E	99	43.529	ENSHBUG00000002559	polr1e	99	43.529	Haplochromis_burtoni
ENSSSCG00000005347	POLR1E	99	88.756	ENSHGLG00000002036	POLR1E	100	88.756	Heterocephalus_glaber_female
ENSSSCG00000005347	POLR1E	99	88.995	ENSHGLG00100012784	POLR1E	100	88.995	Heterocephalus_glaber_male
ENSSSCG00000005347	POLR1E	98	43.237	ENSHCOG00000002774	polr1e	99	43.478	Hippocampus_comes
ENSSSCG00000005347	POLR1E	97	44.660	ENSIPUG00000003019	polr1e	98	44.660	Ictalurus_punctatus
ENSSSCG00000005347	POLR1E	100	87.589	ENSSTOG00000009810	POLR1E	100	87.589	Ictidomys_tridecemlineatus
ENSSSCG00000005347	POLR1E	99	85.372	ENSJJAG00000020731	Polr1e	96	85.372	Jaculus_jaculus
ENSSSCG00000005347	POLR1E	98	41.928	ENSKMAG00000000046	polr1e	99	41.928	Kryptolebias_marmoratus
ENSSSCG00000005347	POLR1E	99	44.737	ENSLBEG00000003104	polr1e	99	44.976	Labrus_bergylta
ENSSSCG00000005347	POLR1E	86	62.431	ENSLACG00000003416	POLR1E	100	62.431	Latimeria_chalumnae
ENSSSCG00000005347	POLR1E	99	49.403	ENSLOCG00000012859	polr1e	99	49.403	Lepisosteus_oculatus
ENSSSCG00000005347	POLR1E	100	87.112	ENSLAFG00000012831	POLR1E	99	87.112	Loxodonta_africana
ENSSSCG00000005347	POLR1E	100	87.589	ENSMFAG00000045465	POLR1E	100	88.136	Macaca_fascicularis
ENSSSCG00000005347	POLR1E	100	87.589	ENSMMUG00000017892	POLR1E	100	88.136	Macaca_mulatta
ENSSSCG00000005347	POLR1E	100	81.119	ENSMNEG00000040283	POLR1E	100	88.053	Macaca_nemestrina
ENSSSCG00000005347	POLR1E	100	87.589	ENSMLEG00000031135	POLR1E	100	88.136	Mandrillus_leucophaeus
ENSSSCG00000005347	POLR1E	99	43.468	ENSMAMG00000001260	polr1e	99	43.468	Mastacembelus_armatus
ENSSSCG00000005347	POLR1E	99	42.588	ENSMZEG00005021536	polr1e	99	42.588	Maylandia_zebra
ENSSSCG00000005347	POLR1E	100	81.146	ENSMAUG00000021044	Polr1e	97	81.146	Mesocricetus_auratus
ENSSSCG00000005347	POLR1E	100	89.976	ENSMICG00000003673	POLR1E	100	89.976	Microcebus_murinus
ENSSSCG00000005347	POLR1E	100	82.100	ENSMOCG00000012920	Polr1e	97	82.100	Microtus_ochrogaster
ENSSSCG00000005347	POLR1E	94	44.444	ENSMMOG00000007391	polr1e	96	44.444	Mola_mola
ENSSSCG00000005347	POLR1E	95	75.000	ENSMODG00000002884	POLR1E	97	75.000	Monodelphis_domestica
ENSSSCG00000005347	POLR1E	99	43.705	ENSMALG00000002665	polr1e	99	43.705	Monopterus_albus
ENSSSCG00000005347	POLR1E	99	79.087	MGP_CAROLIEiJ_G0025967	Polr1e	98	80.051	Mus_caroli
ENSSSCG00000005347	POLR1E	99	79.327	ENSMUSG00000028318	Polr1e	97	80.051	Mus_musculus
ENSSSCG00000005347	POLR1E	99	80.964	MGP_PahariEiJ_G0024114	Polr1e	97	81.772	Mus_pahari
ENSSSCG00000005347	POLR1E	99	79.087	MGP_SPRETEiJ_G0026930	Polr1e	98	79.798	Mus_spretus
ENSSSCG00000005347	POLR1E	100	82.090	ENSMPUG00000006040	POLR1E	99	82.090	Mustela_putorius_furo
ENSSSCG00000005347	POLR1E	100	88.067	ENSMLUG00000012688	POLR1E	97	88.067	Myotis_lucifugus
ENSSSCG00000005347	POLR1E	99	85.407	ENSNGAG00000002520	Polr1e	96	85.407	Nannospalax_galili
ENSSSCG00000005347	POLR1E	99	43.059	ENSNBRG00000016822	polr1e	98	43.541	Neolamprologus_brichardi
ENSSSCG00000005347	POLR1E	100	88.544	ENSNLEG00000003616	POLR1E	100	88.987	Nomascus_leucogenys
ENSSSCG00000005347	POLR1E	73	80.000	ENSMEUG00000015372	-	80	80.000	Notamacropus_eugenii
ENSSSCG00000005347	POLR1E	86	73.816	ENSOPRG00000014206	POLR1E	100	73.816	Ochotona_princeps
ENSSSCG00000005347	POLR1E	99	88.038	ENSODEG00000014565	POLR1E	97	88.038	Octodon_degus
ENSSSCG00000005347	POLR1E	99	43.294	ENSONIG00000008921	polr1e	99	43.294	Oreochromis_niloticus
ENSSSCG00000005347	POLR1E	100	84.726	ENSOCUG00000024773	POLR1E	100	84.726	Oryctolagus_cuniculus
ENSSSCG00000005347	POLR1E	98	44.444	ENSORLG00000005143	polr1e	99	44.444	Oryzias_latipes
ENSSSCG00000005347	POLR1E	92	44.757	ENSORLG00020007271	polr1e	99	44.757	Oryzias_latipes_hni
ENSSSCG00000005347	POLR1E	98	44.203	ENSORLG00015000137	polr1e	99	44.203	Oryzias_latipes_hsok
ENSSSCG00000005347	POLR1E	98	42.754	ENSOMEG00000013264	polr1e	97	42.823	Oryzias_melastigma
ENSSSCG00000005347	POLR1E	100	90.692	ENSOGAG00000012981	POLR1E	98	90.692	Otolemur_garnettii
ENSSSCG00000005347	POLR1E	100	89.737	ENSOARG00000011465	POLR1E	97	89.737	Ovis_aries
ENSSSCG00000005347	POLR1E	100	88.305	ENSPPAG00000034566	POLR1E	100	88.305	Pan_paniscus
ENSSSCG00000005347	POLR1E	100	89.499	ENSPPRG00000005649	POLR1E	100	89.499	Panthera_pardus
ENSSSCG00000005347	POLR1E	100	89.499	ENSPTIG00000009774	POLR1E	100	89.499	Panthera_tigris_altaica
ENSSSCG00000005347	POLR1E	100	88.305	ENSPTRG00000020944	POLR1E	100	88.305	Pan_troglodytes
ENSSSCG00000005347	POLR1E	100	87.589	ENSPANG00000025563	POLR1E	100	88.136	Papio_anubis
ENSSSCG00000005347	POLR1E	97	47.942	ENSPKIG00000003562	polr1e	98	47.942	Paramormyrops_kingsleyae
ENSSSCG00000005347	POLR1E	91	63.969	ENSPSIG00000003274	POLR1E	90	63.969	Pelodiscus_sinensis
ENSSSCG00000005347	POLR1E	94	45.250	ENSPMGG00000024169	polr1e	96	45.250	Periophthalmus_magnuspinnatus
ENSSSCG00000005347	POLR1E	100	81.384	ENSPEMG00000019151	-	97	81.384	Peromyscus_maniculatus_bairdii
ENSSSCG00000005347	POLR1E	100	65.952	ENSPEMG00000022300	-	96	65.952	Peromyscus_maniculatus_bairdii
ENSSSCG00000005347	POLR1E	95	74.747	ENSPCIG00000014798	POLR1E	97	74.747	Phascolarctos_cinereus
ENSSSCG00000005347	POLR1E	98	43.607	ENSPFOG00000019627	polr1e	98	43.607	Poecilia_formosa
ENSSSCG00000005347	POLR1E	98	44.686	ENSPLAG00000022679	polr1e	99	44.686	Poecilia_latipinna
ENSSSCG00000005347	POLR1E	85	44.722	ENSPMEG00000022123	polr1e	93	44.722	Poecilia_mexicana
ENSSSCG00000005347	POLR1E	98	44.203	ENSPREG00000009470	polr1e	99	44.203	Poecilia_reticulata
ENSSSCG00000005347	POLR1E	100	87.351	ENSPPYG00000019061	POLR1E	100	87.351	Pongo_abelii
ENSSSCG00000005347	POLR1E	73	70.395	ENSPCAG00000004891	POLR1E	100	70.395	Procavia_capensis
ENSSSCG00000005347	POLR1E	100	90.215	ENSPCOG00000027448	POLR1E	100	90.215	Propithecus_coquereli
ENSSSCG00000005347	POLR1E	95	91.667	ENSPVAG00000007940	POLR1E	83	91.667	Pteropus_vampyrus
ENSSSCG00000005347	POLR1E	99	43.294	ENSPNYG00000001032	polr1e	99	43.294	Pundamilia_nyererei
ENSSSCG00000005347	POLR1E	97	42.336	ENSPNAG00000006987	polr1e	99	42.336	Pygocentrus_nattereri
ENSSSCG00000005347	POLR1E	99	81.490	ENSRNOG00000012664	Polr1e	96	81.490	Rattus_norvegicus
ENSSSCG00000005347	POLR1E	99	84.578	ENSRBIG00000034214	POLR1E	100	87.402	Rhinopithecus_bieti
ENSSSCG00000005347	POLR1E	100	87.112	ENSRROG00000031986	POLR1E	100	88.136	Rhinopithecus_roxellana
ENSSSCG00000005347	POLR1E	100	88.305	ENSSBOG00000021415	POLR1E	100	88.305	Saimiri_boliviensis_boliviensis
ENSSSCG00000005347	POLR1E	86	71.944	ENSSHAG00000016084	POLR1E	100	71.944	Sarcophilus_harrisii
ENSSSCG00000005347	POLR1E	97	47.317	ENSSFOG00015002293	polr1e	98	47.317	Scleropages_formosus
ENSSSCG00000005347	POLR1E	97	46.324	ENSSMAG00000011672	polr1e	91	46.324	Scophthalmus_maximus
ENSSSCG00000005347	POLR1E	97	45.098	ENSSDUG00000022279	polr1e	97	45.098	Seriola_dumerili
ENSSSCG00000005347	POLR1E	97	44.608	ENSSLDG00000024918	polr1e	97	44.608	Seriola_lalandi_dorsalis
ENSSSCG00000005347	POLR1E	64	77.143	ENSSARG00000009810	-	67	77.143	Sorex_araneus
ENSSSCG00000005347	POLR1E	98	65.617	ENSSPUG00000009499	POLR1E	99	65.617	Sphenodon_punctatus
ENSSSCG00000005347	POLR1E	98	44.686	ENSSPAG00000021240	polr1e	99	44.686	Stegastes_partitus
ENSSSCG00000005347	POLR1E	94	51.693	ENSTGUG00000007169	POLR1E	100	51.693	Taeniopygia_guttata
ENSSSCG00000005347	POLR1E	98	43.855	ENSTRUG00000020779	polr1e	99	44.474	Takifugu_rubripes
ENSSSCG00000005347	POLR1E	98	44.203	ENSTNIG00000017812	polr1e	99	44.203	Tetraodon_nigroviridis
ENSSSCG00000005347	POLR1E	100	86.158	ENSTBEG00000013786	POLR1E	88	86.158	Tupaia_belangeri
ENSSSCG00000005347	POLR1E	95	91.479	ENSTTRG00000008294	POLR1E	85	91.479	Tursiops_truncatus
ENSSSCG00000005347	POLR1E	100	90.215	ENSUAMG00000012474	POLR1E	100	91.008	Ursus_americanus
ENSSSCG00000005347	POLR1E	100	90.215	ENSUMAG00000011496	POLR1E	100	90.215	Ursus_maritimus
ENSSSCG00000005347	POLR1E	82	86.297	ENSVPAG00000009048	POLR1E	81	86.297	Vicugna_pacos
ENSSSCG00000005347	POLR1E	100	91.169	ENSVVUG00000019954	POLR1E	100	91.169	Vulpes_vulpes
ENSSSCG00000005347	POLR1E	98	52.174	ENSXETG00000006533	polr1e	99	52.174	Xenopus_tropicalis
ENSSSCG00000005347	POLR1E	98	43.720	ENSXCOG00000013706	polr1e	99	43.720	Xiphophorus_couchianus
ENSSSCG00000005347	POLR1E	98	45.169	ENSXMAG00000012484	polr1e	99	45.169	Xiphophorus_maculatus