EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000005575 (Gene tree)
Gene ID: 100152442
Gene Symbol: RC3H2
Alias: FLJ20301|FLJ20713|MNAB|RNF164
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 49776 bases
Position: chr1:263772173-263821948
Accession: 100152442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000005969	zf-CCCH	PF00642.24	7.5e-07	1	1
ENSSSCP00000057225	zf-CCCH	PF00642.24	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000006128	RC3H2-202	3920	-	ENSSSCP00000005969	487 (aa)	-	F1SKW1
ENSSSCT00000060389	RC3H2-201	8994	XM_013993835	ENSSSCP00000057225	1190 (aa)	XP_013849289	A0A287BMD1

Gene Model

Click here to download ENSSSCG00000005575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000005575	RC3H2	92	83.002	ENSSSCG00000015498	RC3H1	98	52.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005575	RC3H2	100	97.567	ENSG00000056586	RC3H2	100	99.163	Homo_sapiens
ENSSSCG00000005575	RC3H2	93	86.947	ENSAPOG00000002117	rc3h2	93	56.769	Acanthochromis_polyacanthus
ENSSSCG00000005575	RC3H2	100	98.742	ENSAMEG00000006498	RC3H2	100	98.742	Ailuropoda_melanoleuca
ENSSSCG00000005575	RC3H2	91	86.261	ENSACIG00000005206	rc3h2	97	84.716	Amphilophus_citrinellus
ENSSSCG00000005575	RC3H2	91	87.528	ENSAOCG00000019780	-	93	87.528	Amphiprion_ocellaris
ENSSSCG00000005575	RC3H2	91	87.557	ENSAOCG00000007724	rc3h2	96	87.557	Amphiprion_ocellaris
ENSSSCG00000005575	RC3H2	93	86.726	ENSAPEG00000007757	rc3h2	93	57.205	Amphiprion_percula
ENSSSCG00000005575	RC3H2	92	86.192	ENSATEG00000019414	rc3h2	91	56.499	Anabas_testudineus
ENSSSCG00000005575	RC3H2	93	98.675	ENSAPLG00000013920	RC3H2	100	90.787	Anas_platyrhynchos
ENSSSCG00000005575	RC3H2	100	97.651	ENSANAG00000030862	RC3H2	100	99.163	Aotus_nancymaae
ENSSSCG00000005575	RC3H2	93	84.731	ENSACLG00000023136	rc3h2	92	56.021	Astatotilapia_calliptera
ENSSSCG00000005575	RC3H2	92	85.111	ENSAMXG00000006778	rc3h2	93	54.472	Astyanax_mexicanus
ENSSSCG00000005575	RC3H2	100	98.151	ENSBTAG00000023867	RC3H2	100	98.151	Bos_taurus
ENSSSCG00000005575	RC3H2	100	97.651	ENSCJAG00000020050	RC3H2	100	99.163	Callithrix_jacchus
ENSSSCG00000005575	RC3H2	91	99.774	ENSCAFG00000032522	-	100	99.774	Canis_familiaris
ENSSSCG00000005575	RC3H2	100	98.487	ENSCAFG00020015288	RC3H2	100	99.163	Canis_lupus_dingo
ENSSSCG00000005575	RC3H2	100	98.067	ENSCHIG00000019319	RC3H2	100	98.067	Capra_hircus
ENSSSCG00000005575	RC3H2	77	88.859	ENSCAPG00000017086	RC3H2	93	80.359	Cavia_aperea
ENSSSCG00000005575	RC3H2	100	97.143	ENSCPOG00000008511	RC3H2	100	97.143	Cavia_porcellus
ENSSSCG00000005575	RC3H2	100	97.563	ENSCCAG00000001404	RC3H2	100	99.163	Cebus_capucinus
ENSSSCG00000005575	RC3H2	100	97.819	ENSCATG00000036655	RC3H2	100	99.163	Cercocebus_atys
ENSSSCG00000005575	RC3H2	100	97.395	ENSCLAG00000013261	RC3H2	100	97.395	Chinchilla_lanigera
ENSSSCG00000005575	RC3H2	89	97.648	ENSCSAG00000013416	RC3H2	100	97.648	Chlorocebus_sabaeus
ENSSSCG00000005575	RC3H2	93	98.675	ENSCPBG00000009811	RC3H2	100	89.615	Chrysemys_picta_bellii
ENSSSCG00000005575	RC3H2	100	97.903	ENSCANG00000043140	RC3H2	100	99.163	Colobus_angolensis_palliatus
ENSSSCG00000005575	RC3H2	100	95.210	ENSCGRG00001010006	Rc3h2	100	94.622	Cricetulus_griseus_chok1gshd
ENSSSCG00000005575	RC3H2	93	99.117	ENSCGRG00000009255	Rc3h2	100	94.634	Cricetulus_griseus_crigri
ENSSSCG00000005575	RC3H2	93	85.841	ENSCSEG00000017460	rc3h2	96	55.752	Cynoglossus_semilaevis
ENSSSCG00000005575	RC3H2	92	85.969	ENSCVAG00000012202	rc3h2	91	55.806	Cyprinodon_variegatus
ENSSSCG00000005575	RC3H2	93	84.513	ENSDARG00000063050	rc3h2	96	54.421	Danio_rerio
ENSSSCG00000005575	RC3H2	100	97.059	ENSDNOG00000014557	RC3H2	100	97.059	Dasypus_novemcinctus
ENSSSCG00000005575	RC3H2	100	96.723	ENSDORG00000006398	Rc3h2	100	96.723	Dipodomys_ordii
ENSSSCG00000005575	RC3H2	100	95.966	ENSEASG00005020897	RC3H2	100	95.966	Equus_asinus_asinus
ENSSSCG00000005575	RC3H2	100	98.908	ENSECAG00000022176	RC3H2	100	98.908	Equus_caballus
ENSSSCG00000005575	RC3H2	93	87.389	ENSELUG00000006105	rc3h2	93	57.285	Esox_lucius
ENSSSCG00000005575	RC3H2	100	98.739	ENSFCAG00000007375	RC3H2	100	98.739	Felis_catus
ENSSSCG00000005575	RC3H2	93	98.455	ENSFALG00000002011	RC3H2	100	90.620	Ficedula_albicollis
ENSSSCG00000005575	RC3H2	100	97.731	ENSFDAG00000012477	RC3H2	100	97.731	Fukomys_damarensis
ENSSSCG00000005575	RC3H2	92	86.860	ENSFHEG00000012272	rc3h2	93	55.556	Fundulus_heteroclitus
ENSSSCG00000005575	RC3H2	53	87.160	ENSGMOG00000016709	-	100	51.889	Gadus_morhua
ENSSSCG00000005575	RC3H2	93	98.675	ENSGALG00000001253	RC3H2	100	90.787	Gallus_gallus
ENSSSCG00000005575	RC3H2	93	85.619	ENSGAFG00000007679	rc3h2	96	55.280	Gambusia_affinis
ENSSSCG00000005575	RC3H2	91	87.104	ENSGACG00000017369	rc3h2	100	87.104	Gasterosteus_aculeatus
ENSSSCG00000005575	RC3H2	93	98.896	ENSGAGG00000018295	RC3H2	100	89.866	Gopherus_agassizii
ENSSSCG00000005575	RC3H2	100	97.735	ENSGGOG00000017062	RC3H2	100	98.954	Gorilla_gorilla
ENSSSCG00000005575	RC3H2	93	87.168	ENSHBUG00000003976	rc3h2	92	56.752	Haplochromis_burtoni
ENSSSCG00000005575	RC3H2	98	98.745	ENSHGLG00000012014	-	100	98.745	Heterocephalus_glaber_female
ENSSSCG00000005575	RC3H2	100	97.481	ENSHGLG00100018015	RC3H2	100	97.481	Heterocephalus_glaber_male
ENSSSCG00000005575	RC3H2	92	83.519	ENSHCOG00000003006	rc3h2	87	57.848	Hippocampus_comes
ENSSSCG00000005575	RC3H2	93	83.186	ENSIPUG00000021433	rc3h2	90	56.952	Ictalurus_punctatus
ENSSSCG00000005575	RC3H2	100	98.067	ENSSTOG00000010655	RC3H2	100	98.067	Ictidomys_tridecemlineatus
ENSSSCG00000005575	RC3H2	100	96.896	ENSJJAG00000022376	Rc3h2	100	96.896	Jaculus_jaculus
ENSSSCG00000005575	RC3H2	93	85.398	ENSKMAG00000010936	rc3h2	98	53.699	Kryptolebias_marmoratus
ENSSSCG00000005575	RC3H2	93	93.377	ENSLOCG00000002894	rc3h2	94	62.075	Lepisosteus_oculatus
ENSSSCG00000005575	RC3H2	100	96.723	ENSLAFG00000003521	RC3H2	100	96.723	Loxodonta_africana
ENSSSCG00000005575	RC3H2	100	97.819	ENSMFAG00000035621	RC3H2	100	99.163	Macaca_fascicularis
ENSSSCG00000005575	RC3H2	100	97.819	ENSMMUG00000021134	RC3H2	100	99.163	Macaca_mulatta
ENSSSCG00000005575	RC3H2	100	97.819	ENSMNEG00000031599	RC3H2	100	97.819	Macaca_nemestrina
ENSSSCG00000005575	RC3H2	98	99.163	ENSMLEG00000033809	RC3H2	100	99.163	Mandrillus_leucophaeus
ENSSSCG00000005575	RC3H2	91	87.302	ENSMAMG00000009119	rc3h2	93	87.302	Mastacembelus_armatus
ENSSSCG00000005575	RC3H2	93	87.168	ENSMZEG00005017019	rc3h2	92	56.664	Maylandia_zebra
ENSSSCG00000005575	RC3H2	93	98.242	ENSMGAG00000007984	RC3H2	100	90.719	Meleagris_gallopavo
ENSSSCG00000005575	RC3H2	93	84.106	ENSMAUG00000003117	Rc3h2	95	90.000	Mesocricetus_auratus
ENSSSCG00000005575	RC3H2	100	97.563	ENSMICG00000003227	RC3H2	100	98.954	Microcebus_murinus
ENSSSCG00000005575	RC3H2	100	95.462	ENSMOCG00000009592	Rc3h2	100	95.462	Microtus_ochrogaster
ENSSSCG00000005575	RC3H2	94	85.996	ENSMMOG00000021305	rc3h2	90	87.305	Mola_mola
ENSSSCG00000005575	RC3H2	93	98.896	ENSMODG00000019725	RC3H2	79	94.123	Monodelphis_domestica
ENSSSCG00000005575	RC3H2	90	86.364	ENSMALG00000017885	rc3h2	92	86.364	Monopterus_albus
ENSSSCG00000005575	RC3H2	98	98.536	MGP_CAROLIEiJ_G0023516	Rc3h2	100	98.536	Mus_caroli
ENSSSCG00000005575	RC3H2	98	98.117	ENSMUSG00000075376	Rc3h2	100	98.117	Mus_musculus
ENSSSCG00000005575	RC3H2	98	98.536	MGP_PahariEiJ_G0024969	Rc3h2	100	98.536	Mus_pahari
ENSSSCG00000005575	RC3H2	98	98.326	MGP_SPRETEiJ_G0024436	Rc3h2	100	98.326	Mus_spretus
ENSSSCG00000005575	RC3H2	100	98.151	ENSMPUG00000014141	RC3H2	100	98.151	Mustela_putorius_furo
ENSSSCG00000005575	RC3H2	100	97.397	ENSMLUG00000013992	RC3H2	100	97.397	Myotis_lucifugus
ENSSSCG00000005575	RC3H2	98	95.616	ENSNGAG00000009763	-	100	95.616	Nannospalax_galili
ENSSSCG00000005575	RC3H2	93	87.168	ENSNBRG00000009276	rc3h2	92	56.637	Neolamprologus_brichardi
ENSSSCG00000005575	RC3H2	98	99.163	ENSNLEG00000017204	RC3H2	100	99.163	Nomascus_leucogenys
ENSSSCG00000005575	RC3H2	62	98.814	ENSMEUG00000001299	-	71	98.814	Notamacropus_eugenii
ENSSSCG00000005575	RC3H2	77	98.404	ENSOPRG00000000135	RC3H2	93	92.541	Ochotona_princeps
ENSSSCG00000005575	RC3H2	98	98.745	ENSODEG00000005918	-	100	98.745	Octodon_degus
ENSSSCG00000005575	RC3H2	92	87.751	ENSONIG00000003945	rc3h2	100	58.861	Oreochromis_niloticus
ENSSSCG00000005575	RC3H2	93	98.896	ENSOANG00000008194	RC3H2	100	93.062	Ornithorhynchus_anatinus
ENSSSCG00000005575	RC3H2	100	97.899	ENSOCUG00000008804	RC3H2	100	97.899	Oryctolagus_cuniculus
ENSSSCG00000005575	RC3H2	92	87.305	ENSORLG00000010018	rc3h2	92	56.394	Oryzias_latipes
ENSSSCG00000005575	RC3H2	92	87.305	ENSORLG00020013257	rc3h2	92	56.622	Oryzias_latipes_hni
ENSSSCG00000005575	RC3H2	92	87.305	ENSORLG00015001525	rc3h2	92	56.622	Oryzias_latipes_hsok
ENSSSCG00000005575	RC3H2	92	87.305	ENSOMEG00000023540	rc3h2	93	56.162	Oryzias_melastigma
ENSSSCG00000005575	RC3H2	100	97.315	ENSOGAG00000010678	RC3H2	100	97.315	Otolemur_garnettii
ENSSSCG00000005575	RC3H2	100	97.987	ENSOARG00000013965	RC3H2	100	97.987	Ovis_aries
ENSSSCG00000005575	RC3H2	100	97.651	ENSPPAG00000036013	RC3H2	100	98.954	Pan_paniscus
ENSSSCG00000005575	RC3H2	100	98.658	ENSPPRG00000008698	RC3H2	100	98.658	Panthera_pardus
ENSSSCG00000005575	RC3H2	100	98.658	ENSPTIG00000014257	RC3H2	100	98.658	Panthera_tigris_altaica
ENSSSCG00000005575	RC3H2	100	97.651	ENSPTRG00000021339	RC3H2	100	98.954	Pan_troglodytes
ENSSSCG00000005575	RC3H2	100	96.057	ENSPANG00000025840	RC3H2	100	96.057	Papio_anubis
ENSSSCG00000005575	RC3H2	93	88.962	ENSPKIG00000021910	rc3h2	90	60.411	Paramormyrops_kingsleyae
ENSSSCG00000005575	RC3H2	93	98.675	ENSPSIG00000005393	RC3H2	100	90.034	Pelodiscus_sinensis
ENSSSCG00000005575	RC3H2	91	86.456	ENSPMGG00000023963	rc3h2	94	86.456	Periophthalmus_magnuspinnatus
ENSSSCG00000005575	RC3H2	100	95.546	ENSPEMG00000023441	Rc3h2	100	95.546	Peromyscus_maniculatus_bairdii
ENSSSCG00000005575	RC3H2	100	93.556	ENSPCIG00000025559	RC3H2	100	93.556	Phascolarctos_cinereus
ENSSSCG00000005575	RC3H2	93	85.841	ENSPFOG00000019699	rc3h2	100	57.782	Poecilia_formosa
ENSSSCG00000005575	RC3H2	93	85.398	ENSPLAG00000005799	rc3h2	90	63.303	Poecilia_latipinna
ENSSSCG00000005575	RC3H2	93	85.841	ENSPMEG00000014187	rc3h2	93	54.787	Poecilia_mexicana
ENSSSCG00000005575	RC3H2	93	85.841	ENSPREG00000008979	rc3h2	92	54.610	Poecilia_reticulata
ENSSSCG00000005575	RC3H2	87	89.460	ENSPCAG00000010154	RC3H2	86	91.131	Procavia_capensis
ENSSSCG00000005575	RC3H2	93	84.731	ENSPNYG00000012063	rc3h2	92	56.021	Pundamilia_nyererei
ENSSSCG00000005575	RC3H2	93	86.062	ENSPNAG00000017502	rc3h2	88	58.537	Pygocentrus_nattereri
ENSSSCG00000005575	RC3H2	100	95.630	ENSRNOG00000009196	Rc3h2	100	95.630	Rattus_norvegicus
ENSSSCG00000005575	RC3H2	98	99.163	ENSRBIG00000032579	RC3H2	100	99.163	Rhinopithecus_bieti
ENSSSCG00000005575	RC3H2	100	97.899	ENSRROG00000043784	RC3H2	100	99.163	Rhinopithecus_roxellana
ENSSSCG00000005575	RC3H2	100	97.483	ENSSBOG00000029100	RC3H2	100	98.954	Saimiri_boliviensis_boliviensis
ENSSSCG00000005575	RC3H2	100	93.233	ENSSHAG00000007498	RC3H2	100	93.233	Sarcophilus_harrisii
ENSSSCG00000005575	RC3H2	91	89.796	ENSSFOG00015000964	rc3h2	91	89.796	Scleropages_formosus
ENSSSCG00000005575	RC3H2	93	86.283	ENSSMAG00000020048	rc3h2	93	56.716	Scophthalmus_maximus
ENSSSCG00000005575	RC3H2	93	86.726	ENSSDUG00000016022	rc3h2	93	56.968	Seriola_dumerili
ENSSSCG00000005575	RC3H2	93	86.726	ENSSLDG00000016070	rc3h2	93	56.529	Seriola_lalandi_dorsalis
ENSSSCG00000005575	RC3H2	100	96.309	ENSSARG00000012329	RC3H2	100	96.309	Sorex_araneus
ENSSSCG00000005575	RC3H2	93	97.566	ENSSPUG00000001457	RC3H2	100	88.043	Sphenodon_punctatus
ENSSSCG00000005575	RC3H2	92	87.528	ENSSPAG00000005233	rc3h2	93	56.792	Stegastes_partitus
ENSSSCG00000005575	RC3H2	93	98.675	ENSTGUG00000006889	-	100	90.871	Taeniopygia_guttata
ENSSSCG00000005575	RC3H2	91	86.199	ENSTRUG00000003364	rc3h2	100	86.199	Takifugu_rubripes
ENSSSCG00000005575	RC3H2	95	83.080	ENSTNIG00000004942	rc3h2	100	58.300	Tetraodon_nigroviridis
ENSSSCG00000005575	RC3H2	93	98.234	ENSTBEG00000009622	RC3H2	86	100.000	Tupaia_belangeri
ENSSSCG00000005575	RC3H2	94	98.668	ENSTTRG00000016954	RC3H2	94	98.668	Tursiops_truncatus
ENSSSCG00000005575	RC3H2	100	98.908	ENSUAMG00000015355	RC3H2	100	98.908	Ursus_americanus
ENSSSCG00000005575	RC3H2	100	98.908	ENSUMAG00000003161	RC3H2	100	99.372	Ursus_maritimus
ENSSSCG00000005575	RC3H2	100	98.154	ENSVPAG00000005994	RC3H2	100	98.154	Vicugna_pacos
ENSSSCG00000005575	RC3H2	100	98.319	ENSVVUG00000009519	RC3H2	100	98.319	Vulpes_vulpes
ENSSSCG00000005575	RC3H2	95	83.948	ENSXCOG00000005002	rc3h2	99	83.948	Xiphophorus_couchianus
ENSSSCG00000005575	RC3H2	92	86.637	ENSXMAG00000001724	rc3h2	91	55.209	Xiphophorus_maculatus