EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000005645 (Gene tree)
Gene ID: 100157964
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 11130 bases
Position: chr1:268746329-268757458
Accession: 100157964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000006048	TruB_N	PF01509.18	3.3e-26	1	1
ENSSSCP00000050883	TruB_N	PF01509.18	4.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000006207	TRUB2-202	1280	XM_021069596	ENSSSCP00000006048	296 (aa)	XP_020925255	F1RR98
ENSSSCT00000056718	TRUB2-201	1662	XM_001928419	ENSSSCP00000050883	349 (aa)	XP_001928454	A0A287B3P1

Gene Model

Click here to download ENSSSCG00000005645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000005645	TRUB2	70	32.692	ENSSSCG00000010653	TRUB1	59	32.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005645	TRUB2	99	85.763	ENSG00000167112	TRUB2	100	86.707	Homo_sapiens
ENSSSCG00000005645	TRUB2	79	43.525	ENSAPOG00000018284	-	76	57.664	Acanthochromis_polyacanthus
ENSSSCG00000005645	TRUB2	69	57.561	ENSAPOG00000015733	trub2	74	57.561	Acanthochromis_polyacanthus
ENSSSCG00000005645	TRUB2	99	85.714	ENSAMEG00000015395	TRUB2	99	86.667	Ailuropoda_melanoleuca
ENSSSCG00000005645	TRUB2	84	53.012	ENSACIG00000016500	trub2	90	50.495	Amphilophus_citrinellus
ENSSSCG00000005645	TRUB2	83	56.452	ENSAOCG00000002330	trub2	82	56.475	Amphiprion_ocellaris
ENSSSCG00000005645	TRUB2	84	56.627	ENSAPEG00000013177	trub2	82	56.835	Amphiprion_percula
ENSSSCG00000005645	TRUB2	84	54.582	ENSATEG00000011371	trub2	88	54.643	Anabas_testudineus
ENSSSCG00000005645	TRUB2	76	70.089	ENSAPLG00000009254	TRUB2	94	61.356	Anas_platyrhynchos
ENSSSCG00000005645	TRUB2	88	68.582	ENSACAG00000007331	TRUB2	89	67.123	Anolis_carolinensis
ENSSSCG00000005645	TRUB2	93	88.364	ENSANAG00000036234	TRUB2	100	88.424	Aotus_nancymaae
ENSSSCG00000005645	TRUB2	84	52.610	ENSACLG00000010793	trub2	84	52.878	Astatotilapia_calliptera
ENSSSCG00000005645	TRUB2	84	55.823	ENSAMXG00000031679	trub2	80	56.429	Astyanax_mexicanus
ENSSSCG00000005645	TRUB2	68	81.773	ENSBTAG00000055269	-	92	81.773	Bos_taurus
ENSSSCG00000005645	TRUB2	97	87.847	ENSCJAG00000020009	TRUB2	99	87.156	Callithrix_jacchus
ENSSSCG00000005645	TRUB2	99	86.441	ENSCAFG00000020068	TRUB2	100	86.707	Canis_familiaris
ENSSSCG00000005645	TRUB2	51	90.449	ENSCAFG00020017325	-	100	90.449	Canis_lupus_dingo
ENSSSCG00000005645	TRUB2	99	89.492	ENSCHIG00000021160	TRUB2	100	90.030	Capra_hircus
ENSSSCG00000005645	TRUB2	99	84.746	ENSTSYG00000034163	TRUB2	100	86.103	Carlito_syrichta
ENSSSCG00000005645	TRUB2	97	80.139	ENSCAPG00000000223	TRUB2	97	80.139	Cavia_aperea
ENSSSCG00000005645	TRUB2	97	80.556	ENSCPOG00000013535	TRUB2	97	81.173	Cavia_porcellus
ENSSSCG00000005645	TRUB2	96	87.676	ENSCCAG00000026531	-	98	87.500	Cebus_capucinus
ENSSSCG00000005645	TRUB2	97	86.806	ENSCCAG00000028463	-	98	82.716	Cebus_capucinus
ENSSSCG00000005645	TRUB2	99	84.746	ENSCATG00000038234	TRUB2	100	85.801	Cercocebus_atys
ENSSSCG00000005645	TRUB2	99	79.661	ENSCLAG00000001702	TRUB2	100	80.665	Chinchilla_lanigera
ENSSSCG00000005645	TRUB2	99	80.068	ENSCSAG00000014117	TRUB2	100	81.627	Chlorocebus_sabaeus
ENSSSCG00000005645	TRUB2	99	84.407	ENSCHOG00000001555	TRUB2	100	84.592	Choloepus_hoffmanni
ENSSSCG00000005645	TRUB2	88	67.308	ENSCPBG00000025186	TRUB2	87	65.993	Chrysemys_picta_bellii
ENSSSCG00000005645	TRUB2	84	33.465	ENSCSAVG00000003930	-	90	32.765	Ciona_savignyi
ENSSSCG00000005645	TRUB2	99	74.237	ENSCANG00000016135	TRUB2	100	76.435	Colobus_angolensis_palliatus
ENSSSCG00000005645	TRUB2	99	81.293	ENSCGRG00001024441	Trub2	100	80.967	Cricetulus_griseus_chok1gshd
ENSSSCG00000005645	TRUB2	99	81.293	ENSCGRG00000005633	Trub2	100	80.967	Cricetulus_griseus_crigri
ENSSSCG00000005645	TRUB2	79	55.319	ENSCSEG00000001331	trub2	83	54.317	Cynoglossus_semilaevis
ENSSSCG00000005645	TRUB2	84	55.020	ENSCVAG00000009901	trub2	83	55.596	Cyprinodon_variegatus
ENSSSCG00000005645	TRUB2	84	56.225	ENSDARG00000028379	trub2	79	56.115	Danio_rerio
ENSSSCG00000005645	TRUB2	99	81.695	ENSDNOG00000045679	-	100	82.779	Dasypus_novemcinctus
ENSSSCG00000005645	TRUB2	97	59.091	ENSDNOG00000043967	-	96	56.656	Dasypus_novemcinctus
ENSSSCG00000005645	TRUB2	99	79.530	ENSDORG00000016222	Trub2	98	84.194	Dipodomys_ordii
ENSSSCG00000005645	TRUB2	77	32.721	FBgn0033060	CG7849	85	32.721	Drosophila_melanogaster
ENSSSCG00000005645	TRUB2	89	87.786	ENSETEG00000009114	TRUB2	92	87.919	Echinops_telfairi
ENSSSCG00000005645	TRUB2	68	48.750	ENSEBUG00000015723	trub2	83	48.750	Eptatretus_burgeri
ENSSSCG00000005645	TRUB2	99	88.136	ENSEASG00005016819	TRUB2	100	88.520	Equus_asinus_asinus
ENSSSCG00000005645	TRUB2	99	88.475	ENSECAG00000023520	TRUB2	100	89.124	Equus_caballus
ENSSSCG00000005645	TRUB2	96	85.915	ENSEEUG00000008908	TRUB2	97	86.875	Erinaceus_europaeus
ENSSSCG00000005645	TRUB2	84	55.725	ENSELUG00000002376	trub2	91	56.357	Esox_lucius
ENSSSCG00000005645	TRUB2	99	84.746	ENSFCAG00000005839	TRUB2	100	84.985	Felis_catus
ENSSSCG00000005645	TRUB2	89	65.909	ENSFALG00000001364	TRUB2	86	66.292	Ficedula_albicollis
ENSSSCG00000005645	TRUB2	99	80.272	ENSFDAG00000021374	TRUB2	99	80.909	Fukomys_damarensis
ENSSSCG00000005645	TRUB2	84	47.390	ENSFHEG00000014655	trub2	82	48.921	Fundulus_heteroclitus
ENSSSCG00000005645	TRUB2	79	47.101	ENSGMOG00000000981	trub2	92	47.101	Gadus_morhua
ENSSSCG00000005645	TRUB2	88	64.368	ENSGALG00000004920	TRUB2	74	61.765	Gallus_gallus
ENSSSCG00000005645	TRUB2	84	54.217	ENSGAFG00000010107	trub2	83	55.396	Gambusia_affinis
ENSSSCG00000005645	TRUB2	84	56.400	ENSGACG00000001476	trub2	84	56.631	Gasterosteus_aculeatus
ENSSSCG00000005645	TRUB2	88	69.349	ENSGAGG00000022872	TRUB2	86	68.621	Gopherus_agassizii
ENSSSCG00000005645	TRUB2	99	85.714	ENSGGOG00000014780	TRUB2	100	86.405	Gorilla_gorilla
ENSSSCG00000005645	TRUB2	84	53.414	ENSHBUG00000022384	trub2	84	54.122	Haplochromis_burtoni
ENSSSCG00000005645	TRUB2	99	79.661	ENSHGLG00000016715	TRUB2	100	80.665	Heterocephalus_glaber_female
ENSSSCG00000005645	TRUB2	99	79.661	ENSHGLG00100016548	TRUB2	100	80.665	Heterocephalus_glaber_male
ENSSSCG00000005645	TRUB2	81	57.261	ENSHCOG00000017748	trub2	85	57.554	Hippocampus_comes
ENSSSCG00000005645	TRUB2	88	52.874	ENSIPUG00000017725	hdhd3	51	53.584	Ictalurus_punctatus
ENSSSCG00000005645	TRUB2	99	82.712	ENSSTOG00000022617	-	99	83.180	Ictidomys_tridecemlineatus
ENSSSCG00000005645	TRUB2	99	82.034	ENSSTOG00000008024	-	100	82.175	Ictidomys_tridecemlineatus
ENSSSCG00000005645	TRUB2	99	74.061	ENSJJAG00000019181	Trub2	97	75.380	Jaculus_jaculus
ENSSSCG00000005645	TRUB2	83	53.226	ENSKMAG00000007861	trub2	83	54.152	Kryptolebias_marmoratus
ENSSSCG00000005645	TRUB2	93	49.455	ENSLBEG00000000907	trub2	90	50.654	Labrus_bergylta
ENSSSCG00000005645	TRUB2	87	66.148	ENSLACG00000001515	TRUB2	85	66.434	Latimeria_chalumnae
ENSSSCG00000005645	TRUB2	88	58.175	ENSLOCG00000000885	trub2	99	57.807	Lepisosteus_oculatus
ENSSSCG00000005645	TRUB2	90	89.139	ENSLAFG00000002174	TRUB2	99	90.066	Loxodonta_africana
ENSSSCG00000005645	TRUB2	99	84.068	ENSMFAG00000000881	TRUB2	100	85.196	Macaca_fascicularis
ENSSSCG00000005645	TRUB2	99	84.068	ENSMMUG00000014146	TRUB2	100	85.196	Macaca_mulatta
ENSSSCG00000005645	TRUB2	99	83.729	ENSMNEG00000011189	TRUB2	100	84.894	Macaca_nemestrina
ENSSSCG00000005645	TRUB2	99	85.085	ENSMLEG00000037270	TRUB2	100	86.103	Mandrillus_leucophaeus
ENSSSCG00000005645	TRUB2	84	55.020	ENSMAMG00000023643	trub2	92	55.396	Mastacembelus_armatus
ENSSSCG00000005645	TRUB2	84	53.012	ENSMZEG00005016018	trub2	84	53.763	Maylandia_zebra
ENSSSCG00000005645	TRUB2	67	69.849	ENSMGAG00000003894	TRUB2	99	69.849	Meleagris_gallopavo
ENSSSCG00000005645	TRUB2	99	82.373	ENSMAUG00000010403	Trub2	100	82.175	Mesocricetus_auratus
ENSSSCG00000005645	TRUB2	99	87.119	ENSMICG00000047032	TRUB2	100	87.311	Microcebus_murinus
ENSSSCG00000005645	TRUB2	90	86.792	ENSMOCG00000014291	Trub2	99	86.379	Microtus_ochrogaster
ENSSSCG00000005645	TRUB2	84	56.000	ENSMMOG00000021674	trub2	86	56.272	Mola_mola
ENSSSCG00000005645	TRUB2	88	76.538	ENSMODG00000005940	TRUB2	99	77.397	Monodelphis_domestica
ENSSSCG00000005645	TRUB2	91	53.818	ENSMALG00000021231	trub2	90	54.605	Monopterus_albus
ENSSSCG00000005645	TRUB2	99	81.695	MGP_CAROLIEiJ_G0023368	Trub2	100	81.873	Mus_caroli
ENSSSCG00000005645	TRUB2	99	81.293	ENSMUSG00000039826	Trub2	100	81.571	Mus_musculus
ENSSSCG00000005645	TRUB2	99	81.017	MGP_PahariEiJ_G0024826	Trub2	100	81.571	Mus_pahari
ENSSSCG00000005645	TRUB2	99	80.952	MGP_SPRETEiJ_G0024286	Trub2	100	81.269	Mus_spretus
ENSSSCG00000005645	TRUB2	99	84.068	ENSMPUG00000013206	TRUB2	95	83.046	Mustela_putorius_furo
ENSSSCG00000005645	TRUB2	97	88.502	ENSMLUG00000005256	TRUB2	97	88.545	Myotis_lucifugus
ENSSSCG00000005645	TRUB2	99	81.356	ENSNGAG00000018679	Trub2	100	81.571	Nannospalax_galili
ENSSSCG00000005645	TRUB2	84	52.610	ENSNBRG00000016294	trub2	84	52.878	Neolamprologus_brichardi
ENSSSCG00000005645	TRUB2	99	84.068	ENSNLEG00000017556	TRUB2	100	85.196	Nomascus_leucogenys
ENSSSCG00000005645	TRUB2	92	76.087	ENSMEUG00000000484	TRUB2	100	76.603	Notamacropus_eugenii
ENSSSCG00000005645	TRUB2	99	77.891	ENSOPRG00000001981	TRUB2	100	79.394	Ochotona_princeps
ENSSSCG00000005645	TRUB2	97	81.597	ENSODEG00000017292	TRUB2	99	82.716	Octodon_degus
ENSSSCG00000005645	TRUB2	84	53.012	ENSONIG00000004230	trub2	84	53.237	Oreochromis_niloticus
ENSSSCG00000005645	TRUB2	63	79.679	ENSOANG00000029023	-	83	79.679	Ornithorhynchus_anatinus
ENSSSCG00000005645	TRUB2	99	83.390	ENSOCUG00000026296	TRUB2	92	84.179	Oryctolagus_cuniculus
ENSSSCG00000005645	TRUB2	88	51.145	ENSORLG00000020011	trub2	88	52.542	Oryzias_latipes
ENSSSCG00000005645	TRUB2	89	51.331	ENSORLG00020011028	trub2	86	52.721	Oryzias_latipes_hni
ENSSSCG00000005645	TRUB2	89	51.331	ENSORLG00015007494	trub2	90	52.721	Oryzias_latipes_hsok
ENSSSCG00000005645	TRUB2	84	55.020	ENSOMEG00000006702	trub2	84	56.115	Oryzias_melastigma
ENSSSCG00000005645	TRUB2	85	88.095	ENSOARG00000003785	-	100	88.095	Ovis_aries
ENSSSCG00000005645	TRUB2	99	90.169	ENSOARG00000010579	-	100	90.332	Ovis_aries
ENSSSCG00000005645	TRUB2	99	85.424	ENSPPAG00000043146	TRUB2	100	86.405	Pan_paniscus
ENSSSCG00000005645	TRUB2	99	84.746	ENSPPRG00000006307	TRUB2	100	84.985	Panthera_pardus
ENSSSCG00000005645	TRUB2	99	84.407	ENSPTIG00000012366	TRUB2	100	84.685	Panthera_tigris_altaica
ENSSSCG00000005645	TRUB2	97	87.153	ENSPTRG00000052151	-	98	87.963	Pan_troglodytes
ENSSSCG00000005645	TRUB2	97	87.153	ENSPTRG00000021423	TRUB2	98	87.963	Pan_troglodytes
ENSSSCG00000005645	TRUB2	99	85.085	ENSPANG00000025856	TRUB2	100	86.103	Papio_anubis
ENSSSCG00000005645	TRUB2	84	54.980	ENSPKIG00000019769	trub2	91	56.272	Paramormyrops_kingsleyae
ENSSSCG00000005645	TRUB2	88	63.985	ENSPSIG00000015701	TRUB2	99	62.034	Pelodiscus_sinensis
ENSSSCG00000005645	TRUB2	83	52.400	ENSPMGG00000010206	trub2	90	52.962	Periophthalmus_magnuspinnatus
ENSSSCG00000005645	TRUB2	99	81.081	ENSPEMG00000017893	Trub2	100	81.627	Peromyscus_maniculatus_bairdii
ENSSSCG00000005645	TRUB2	88	78.846	ENSPCIG00000026731	TRUB2	95	78.716	Phascolarctos_cinereus
ENSSSCG00000005645	TRUB2	84	54.217	ENSPFOG00000018018	trub2	74	54.480	Poecilia_formosa
ENSSSCG00000005645	TRUB2	84	53.815	ENSPLAG00000010484	trub2	80	54.122	Poecilia_latipinna
ENSSSCG00000005645	TRUB2	88	52.290	ENSPMEG00000012913	trub2	86	52.901	Poecilia_mexicana
ENSSSCG00000005645	TRUB2	84	52.610	ENSPREG00000002549	trub2	82	53.597	Poecilia_reticulata
ENSSSCG00000005645	TRUB2	97	85.764	ENSPPYG00000019650	TRUB2	99	86.728	Pongo_abelii
ENSSSCG00000005645	TRUB2	99	86.102	ENSPCAG00000015068	TRUB2	100	86.103	Procavia_capensis
ENSSSCG00000005645	TRUB2	99	86.441	ENSPCOG00000017100	TRUB2	100	87.311	Propithecus_coquereli
ENSSSCG00000005645	TRUB2	97	88.811	ENSPVAG00000001224	TRUB2	100	89.262	Pteropus_vampyrus
ENSSSCG00000005645	TRUB2	84	53.012	ENSPNYG00000013666	trub2	84	53.763	Pundamilia_nyererei
ENSSSCG00000005645	TRUB2	83	54.032	ENSPNAG00000017292	trub2	80	55.197	Pygocentrus_nattereri
ENSSSCG00000005645	TRUB2	96	81.185	ENSRNOG00000043189	Trub2	99	81.424	Rattus_norvegicus
ENSSSCG00000005645	TRUB2	99	75.932	ENSRBIG00000006965	TRUB2	100	77.946	Rhinopithecus_bieti
ENSSSCG00000005645	TRUB2	99	85.085	ENSRROG00000042928	TRUB2	100	86.103	Rhinopithecus_roxellana
ENSSSCG00000005645	TRUB2	97	86.806	ENSSBOG00000022439	TRUB2	98	86.728	Saimiri_boliviensis_boliviensis
ENSSSCG00000005645	TRUB2	84	57.600	ENSSFOG00015013391	trub2	92	57.986	Scleropages_formosus
ENSSSCG00000005645	TRUB2	96	51.228	ENSSMAG00000020820	trub2	95	53.185	Scophthalmus_maximus
ENSSSCG00000005645	TRUB2	84	54.618	ENSSDUG00000016928	trub2	90	51.974	Seriola_dumerili
ENSSSCG00000005645	TRUB2	84	55.422	ENSSLDG00000024701	trub2	83	55.396	Seriola_lalandi_dorsalis
ENSSSCG00000005645	TRUB2	88	63.602	ENSSPUG00000015515	TRUB2	90	64.000	Sphenodon_punctatus
ENSSSCG00000005645	TRUB2	81	60.246	ENSSPAG00000017865	trub2	84	59.075	Stegastes_partitus
ENSSSCG00000005645	TRUB2	88	67.433	ENSTGUG00000003704	TRUB2	99	67.433	Taeniopygia_guttata
ENSSSCG00000005645	TRUB2	83	51.613	ENSTRUG00000015499	trub2	86	51.071	Takifugu_rubripes
ENSSSCG00000005645	TRUB2	83	52.800	ENSTNIG00000014721	trub2	96	53.737	Tetraodon_nigroviridis
ENSSSCG00000005645	TRUB2	76	80.889	ENSTBEG00000000586	TRUB2	100	80.889	Tupaia_belangeri
ENSSSCG00000005645	TRUB2	99	85.763	ENSTTRG00000016486	TRUB2	100	86.707	Tursiops_truncatus
ENSSSCG00000005645	TRUB2	99	87.415	ENSUAMG00000020276	TRUB2	96	88.182	Ursus_americanus
ENSSSCG00000005645	TRUB2	99	87.415	ENSUMAG00000022051	TRUB2	96	88.182	Ursus_maritimus
ENSSSCG00000005645	TRUB2	95	66.904	ENSVPAG00000005793	TRUB2	100	70.032	Vicugna_pacos
ENSSSCG00000005645	TRUB2	90	90.566	ENSVVUG00000013451	TRUB2	88	89.935	Vulpes_vulpes
ENSSSCG00000005645	TRUB2	95	60.714	ENSXETG00000003973	trub2	95	61.812	Xenopus_tropicalis
ENSSSCG00000005645	TRUB2	84	53.414	ENSXCOG00000008759	trub2	83	54.676	Xiphophorus_couchianus
ENSSSCG00000005645	TRUB2	84	53.414	ENSXMAG00000015478	trub2	83	54.676	Xiphophorus_maculatus