EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000005704 (Gene tree)
Gene ID: 100523112
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 9167 bases
Position: chr1:270748537-270757703
Accession: 100523112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000006111	ECR1_N	PF14382.6	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000006273	EXOSC2-201	1389	XM_003122238	ENSSSCP00000006111	293 (aa)	XP_003122286	F1S0X6

Gene Model

Click here to download ENSSSCG00000005704's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005704	EXOSC2	100	97.952	ENSG00000130713	EXOSC2	100	97.952	Homo_sapiens
ENSSSCG00000005704	EXOSC2	96	75.704	ENSAPOG00000008861	exosc2	97	79.623	Acanthochromis_polyacanthus
ENSSSCG00000005704	EXOSC2	100	96.928	ENSAMEG00000016239	EXOSC2	100	96.928	Ailuropoda_melanoleuca
ENSSSCG00000005704	EXOSC2	100	78.840	ENSACIG00000019054	exosc2	100	78.840	Amphilophus_citrinellus
ENSSSCG00000005704	EXOSC2	100	78.840	ENSAOCG00000004983	exosc2	100	78.840	Amphiprion_ocellaris
ENSSSCG00000005704	EXOSC2	100	78.840	ENSAOCG00000008577	exosc2	100	78.840	Amphiprion_ocellaris
ENSSSCG00000005704	EXOSC2	100	78.840	ENSAPEG00000014088	exosc2	100	78.840	Amphiprion_percula
ENSSSCG00000005704	EXOSC2	100	79.863	ENSATEG00000018680	exosc2	100	79.863	Anabas_testudineus
ENSSSCG00000005704	EXOSC2	96	88.298	ENSAPLG00000012516	EXOSC2	97	88.298	Anas_platyrhynchos
ENSSSCG00000005704	EXOSC2	99	85.959	ENSACAG00000002706	EXOSC2	99	85.959	Anolis_carolinensis
ENSSSCG00000005704	EXOSC2	100	78.157	ENSACLG00000013613	exosc2	100	78.157	Astatotilapia_calliptera
ENSSSCG00000005704	EXOSC2	100	81.356	ENSAMXG00000042605	exosc2	100	81.356	Astyanax_mexicanus
ENSSSCG00000005704	EXOSC2	100	96.928	ENSBTAG00000048071	EXOSC2	100	96.928	Bos_taurus
ENSSSCG00000005704	EXOSC2	95	42.143	WBGene00022232	exos-2	92	42.143	Caenorhabditis_elegans
ENSSSCG00000005704	EXOSC2	100	97.952	ENSCJAG00000020537	EXOSC2	100	97.952	Callithrix_jacchus
ENSSSCG00000005704	EXOSC2	99	96.233	ENSCAFG00000019941	EXOSC2	99	96.233	Canis_familiaris
ENSSSCG00000005704	EXOSC2	100	96.246	ENSCAFG00020024047	EXOSC2	100	96.246	Canis_lupus_dingo
ENSSSCG00000005704	EXOSC2	100	96.928	ENSCHIG00000021398	EXOSC2	100	96.928	Capra_hircus
ENSSSCG00000005704	EXOSC2	100	96.587	ENSTSYG00000001805	EXOSC2	100	96.587	Carlito_syrichta
ENSSSCG00000005704	EXOSC2	100	92.150	ENSCPOG00000005902	EXOSC2	100	92.150	Cavia_porcellus
ENSSSCG00000005704	EXOSC2	100	97.952	ENSCCAG00000019749	EXOSC2	100	97.952	Cebus_capucinus
ENSSSCG00000005704	EXOSC2	100	97.270	ENSCATG00000025389	-	100	97.270	Cercocebus_atys
ENSSSCG00000005704	EXOSC2	100	96.928	ENSCLAG00000006195	EXOSC2	100	96.928	Chinchilla_lanigera
ENSSSCG00000005704	EXOSC2	100	97.270	ENSCSAG00000014760	EXOSC2	100	97.270	Chlorocebus_sabaeus
ENSSSCG00000005704	EXOSC2	100	97.270	ENSCHOG00000000858	EXOSC2	100	97.270	Choloepus_hoffmanni
ENSSSCG00000005704	EXOSC2	99	88.014	ENSCPBG00000022626	EXOSC2	99	88.014	Chrysemys_picta_bellii
ENSSSCG00000005704	EXOSC2	96	62.847	ENSCING00000014934	-	94	62.847	Ciona_intestinalis
ENSSSCG00000005704	EXOSC2	92	62.681	ENSCSAVG00000003684	-	100	62.681	Ciona_savignyi
ENSSSCG00000005704	EXOSC2	100	97.270	ENSCANG00000039828	-	100	97.270	Colobus_angolensis_palliatus
ENSSSCG00000005704	EXOSC2	99	90.068	ENSCANG00000029298	-	99	90.068	Colobus_angolensis_palliatus
ENSSSCG00000005704	EXOSC2	100	95.222	ENSCGRG00001013981	Exosc2	100	95.222	Cricetulus_griseus_chok1gshd
ENSSSCG00000005704	EXOSC2	100	95.222	ENSCGRG00000017629	Exosc2	100	95.222	Cricetulus_griseus_crigri
ENSSSCG00000005704	EXOSC2	100	78.157	ENSCSEG00000016539	exosc2	100	78.157	Cynoglossus_semilaevis
ENSSSCG00000005704	EXOSC2	100	77.816	ENSCVAG00000022260	exosc2	100	77.816	Cyprinodon_variegatus
ENSSSCG00000005704	EXOSC2	100	78.305	ENSDARG00000028688	exosc2	100	78.305	Danio_rerio
ENSSSCG00000005704	EXOSC2	91	98.502	ENSDNOG00000025767	-	100	98.502	Dasypus_novemcinctus
ENSSSCG00000005704	EXOSC2	100	94.198	ENSDORG00000009238	Exosc2	100	94.198	Dipodomys_ordii
ENSSSCG00000005704	EXOSC2	91	60.000	FBgn0034879	Rrp4	91	60.370	Drosophila_melanogaster
ENSSSCG00000005704	EXOSC2	95	79.061	ENSETEG00000016130	-	100	79.061	Echinops_telfairi
ENSSSCG00000005704	EXOSC2	100	97.952	ENSEASG00005008475	EXOSC2	86	97.952	Equus_asinus_asinus
ENSSSCG00000005704	EXOSC2	100	97.952	ENSECAG00000007897	EXOSC2	86	97.952	Equus_caballus
ENSSSCG00000005704	EXOSC2	100	80.000	ENSELUG00000013641	exosc2	100	80.000	Esox_lucius
ENSSSCG00000005704	EXOSC2	100	96.928	ENSFCAG00000025936	EXOSC2	100	96.928	Felis_catus
ENSSSCG00000005704	EXOSC2	98	83.972	ENSFALG00000001446	EXOSC2	98	83.972	Ficedula_albicollis
ENSSSCG00000005704	EXOSC2	100	95.563	ENSFDAG00000017196	EXOSC2	100	95.563	Fukomys_damarensis
ENSSSCG00000005704	EXOSC2	100	78.498	ENSFHEG00000018571	exosc2	100	78.498	Fundulus_heteroclitus
ENSSSCG00000005704	EXOSC2	100	74.403	ENSGMOG00000011785	exosc2	99	74.403	Gadus_morhua
ENSSSCG00000005704	EXOSC2	99	86.986	ENSGALG00000040373	EXOSC2	99	86.986	Gallus_gallus
ENSSSCG00000005704	EXOSC2	99	77.397	ENSGAFG00000010283	exosc2	99	77.397	Gambusia_affinis
ENSSSCG00000005704	EXOSC2	100	76.792	ENSGACG00000016805	exosc2	99	77.108	Gasterosteus_aculeatus
ENSSSCG00000005704	EXOSC2	87	90.980	ENSGAGG00000021026	EXOSC2	96	90.980	Gopherus_agassizii
ENSSSCG00000005704	EXOSC2	100	97.270	ENSGGOG00000010578	EXOSC2	100	97.270	Gorilla_gorilla
ENSSSCG00000005704	EXOSC2	100	78.840	ENSHBUG00000022437	exosc2	100	78.840	Haplochromis_burtoni
ENSSSCG00000005704	EXOSC2	100	97.270	ENSHGLG00000012834	EXOSC2	100	97.270	Heterocephalus_glaber_female
ENSSSCG00000005704	EXOSC2	100	97.270	ENSHGLG00100007092	EXOSC2	100	97.270	Heterocephalus_glaber_male
ENSSSCG00000005704	EXOSC2	100	76.792	ENSHCOG00000019130	exosc2	100	76.792	Hippocampus_comes
ENSSSCG00000005704	EXOSC2	100	78.231	ENSIPUG00000015397	exosc2	100	78.231	Ictalurus_punctatus
ENSSSCG00000005704	EXOSC2	100	96.587	ENSSTOG00000005999	EXOSC2	100	96.587	Ictidomys_tridecemlineatus
ENSSSCG00000005704	EXOSC2	100	95.904	ENSJJAG00000003188	Exosc2	100	95.904	Jaculus_jaculus
ENSSSCG00000005704	EXOSC2	99	77.740	ENSKMAG00000017397	exosc2	99	77.740	Kryptolebias_marmoratus
ENSSSCG00000005704	EXOSC2	100	77.816	ENSLBEG00000019269	exosc2	100	77.816	Labrus_bergylta
ENSSSCG00000005704	EXOSC2	100	84.014	ENSLACG00000015530	EXOSC2	100	84.014	Latimeria_chalumnae
ENSSSCG00000005704	EXOSC2	100	97.959	ENSLAFG00000006984	EXOSC2	100	97.959	Loxodonta_africana
ENSSSCG00000005704	EXOSC2	100	97.270	ENSMFAG00000000597	-	100	97.270	Macaca_fascicularis
ENSSSCG00000005704	EXOSC2	100	83.959	ENSMFAG00000034160	-	84	83.959	Macaca_fascicularis
ENSSSCG00000005704	EXOSC2	100	94.198	ENSMMUG00000012498	EXOSC2	100	94.198	Macaca_mulatta
ENSSSCG00000005704	EXOSC2	100	97.270	ENSMNEG00000031861	-	100	97.270	Macaca_nemestrina
ENSSSCG00000005704	EXOSC2	100	84.983	ENSMNEG00000028704	-	91	84.983	Macaca_nemestrina
ENSSSCG00000005704	EXOSC2	100	83.959	ENSMLEG00000029891	-	91	83.959	Mandrillus_leucophaeus
ENSSSCG00000005704	EXOSC2	100	97.270	ENSMLEG00000042587	-	100	97.270	Mandrillus_leucophaeus
ENSSSCG00000005704	EXOSC2	100	79.181	ENSMAMG00000012466	exosc2	100	79.181	Mastacembelus_armatus
ENSSSCG00000005704	EXOSC2	100	77.816	ENSMZEG00005018737	exosc2	100	77.816	Maylandia_zebra
ENSSSCG00000005704	EXOSC2	99	86.986	ENSMGAG00000005450	EXOSC2	99	86.986	Meleagris_gallopavo
ENSSSCG00000005704	EXOSC2	100	94.881	ENSMAUG00000008299	Exosc2	100	94.881	Mesocricetus_auratus
ENSSSCG00000005704	EXOSC2	100	98.294	ENSMICG00000015495	EXOSC2	100	98.294	Microcebus_murinus
ENSSSCG00000005704	EXOSC2	100	95.563	ENSMOCG00000008262	Exosc2	100	95.563	Microtus_ochrogaster
ENSSSCG00000005704	EXOSC2	100	79.522	ENSMMOG00000009616	exosc2	100	79.522	Mola_mola
ENSSSCG00000005704	EXOSC2	100	92.833	ENSMODG00000012114	EXOSC2	100	92.833	Monodelphis_domestica
ENSSSCG00000005704	EXOSC2	100	78.840	ENSMALG00000022132	exosc2	100	78.840	Monopterus_albus
ENSSSCG00000005704	EXOSC2	100	94.539	MGP_CAROLIEiJ_G0023415	Exosc2	100	94.595	Mus_caroli
ENSSSCG00000005704	EXOSC2	100	94.539	ENSMUSG00000039356	Exosc2	100	94.595	Mus_musculus
ENSSSCG00000005704	EXOSC2	100	94.198	MGP_PahariEiJ_G0024872	Exosc2	100	94.595	Mus_pahari
ENSSSCG00000005704	EXOSC2	100	94.539	MGP_SPRETEiJ_G0024332	Exosc2	100	94.595	Mus_spretus
ENSSSCG00000005704	EXOSC2	100	96.928	ENSMPUG00000012686	EXOSC2	100	96.928	Mustela_putorius_furo
ENSSSCG00000005704	EXOSC2	100	97.627	ENSMLUG00000008776	EXOSC2	100	97.627	Myotis_lucifugus
ENSSSCG00000005704	EXOSC2	100	94.881	ENSNGAG00000019383	Exosc2	100	94.881	Nannospalax_galili
ENSSSCG00000005704	EXOSC2	100	78.498	ENSNBRG00000005453	exosc2	100	78.498	Neolamprologus_brichardi
ENSSSCG00000005704	EXOSC2	100	97.952	ENSNLEG00000012533	EXOSC2	100	97.952	Nomascus_leucogenys
ENSSSCG00000005704	EXOSC2	100	72.696	ENSMEUG00000000795	EXOSC2	100	72.696	Notamacropus_eugenii
ENSSSCG00000005704	EXOSC2	65	97.576	ENSOPRG00000008688	EXOSC2	65	97.576	Ochotona_princeps
ENSSSCG00000005704	EXOSC2	87	94.488	ENSODEG00000019513	-	100	94.488	Octodon_degus
ENSSSCG00000005704	EXOSC2	100	93.515	ENSODEG00000016880	-	100	93.515	Octodon_degus
ENSSSCG00000005704	EXOSC2	100	78.498	ENSONIG00000014086	exosc2	100	78.498	Oreochromis_niloticus
ENSSSCG00000005704	EXOSC2	100	86.348	ENSOANG00000001044	EXOSC2	100	86.348	Ornithorhynchus_anatinus
ENSSSCG00000005704	EXOSC2	100	95.222	ENSOCUG00000007138	EXOSC2	100	95.222	Oryctolagus_cuniculus
ENSSSCG00000005704	EXOSC2	100	78.840	ENSORLG00000007443	exosc2	100	78.840	Oryzias_latipes
ENSSSCG00000005704	EXOSC2	100	78.498	ENSORLG00020018902	exosc2	100	78.498	Oryzias_latipes_hni
ENSSSCG00000005704	EXOSC2	100	78.840	ENSORLG00015006767	exosc2	100	78.840	Oryzias_latipes_hsok
ENSSSCG00000005704	EXOSC2	100	77.816	ENSOMEG00000003533	exosc2	100	77.816	Oryzias_melastigma
ENSSSCG00000005704	EXOSC2	100	97.952	ENSOGAG00000007558	EXOSC2	100	97.952	Otolemur_garnettii
ENSSSCG00000005704	EXOSC2	100	96.610	ENSOARG00000007438	EXOSC2	100	96.610	Ovis_aries
ENSSSCG00000005704	EXOSC2	100	97.952	ENSPPAG00000034796	EXOSC2	100	97.952	Pan_paniscus
ENSSSCG00000005704	EXOSC2	100	97.270	ENSPPRG00000001089	EXOSC2	100	97.270	Panthera_pardus
ENSSSCG00000005704	EXOSC2	100	97.270	ENSPTIG00000021163	EXOSC2	100	97.270	Panthera_tigris_altaica
ENSSSCG00000005704	EXOSC2	100	97.952	ENSPTRG00000045766	-	100	97.952	Pan_troglodytes
ENSSSCG00000005704	EXOSC2	100	97.952	ENSPTRG00000021476	EXOSC2	100	97.952	Pan_troglodytes
ENSSSCG00000005704	EXOSC2	100	97.270	ENSPANG00000025966	EXOSC2	100	97.270	Papio_anubis
ENSSSCG00000005704	EXOSC2	99	80.969	ENSPKIG00000004271	exosc2	98	80.969	Paramormyrops_kingsleyae
ENSSSCG00000005704	EXOSC2	99	88.699	ENSPSIG00000006743	EXOSC2	99	88.699	Pelodiscus_sinensis
ENSSSCG00000005704	EXOSC2	86	80.237	ENSPMGG00000010980	exosc2	99	80.237	Periophthalmus_magnuspinnatus
ENSSSCG00000005704	EXOSC2	100	95.563	ENSPEMG00000006345	Exosc2	100	95.563	Peromyscus_maniculatus_bairdii
ENSSSCG00000005704	EXOSC2	100	76.610	ENSPMAG00000001280	exosc2	100	76.610	Petromyzon_marinus
ENSSSCG00000005704	EXOSC2	100	93.174	ENSPCIG00000024122	EXOSC2	97	93.174	Phascolarctos_cinereus
ENSSSCG00000005704	EXOSC2	99	77.816	ENSPFOG00000019819	exosc2	99	77.816	Poecilia_formosa
ENSSSCG00000005704	EXOSC2	99	78.082	ENSPLAG00000004605	exosc2	99	78.082	Poecilia_latipinna
ENSSSCG00000005704	EXOSC2	99	78.082	ENSPMEG00000010976	exosc2	99	78.082	Poecilia_mexicana
ENSSSCG00000005704	EXOSC2	99	77.740	ENSPREG00000014306	exosc2	99	77.740	Poecilia_reticulata
ENSSSCG00000005704	EXOSC2	100	97.611	ENSPPYG00000019695	EXOSC2	100	97.611	Pongo_abelii
ENSSSCG00000005704	EXOSC2	100	97.611	ENSPCAG00000013400	EXOSC2	100	97.611	Procavia_capensis
ENSSSCG00000005704	EXOSC2	100	97.611	ENSPCOG00000017639	EXOSC2	100	97.611	Propithecus_coquereli
ENSSSCG00000005704	EXOSC2	100	96.246	ENSPVAG00000001513	EXOSC2	100	96.246	Pteropus_vampyrus
ENSSSCG00000005704	EXOSC2	100	78.840	ENSPNYG00000007383	exosc2	100	78.840	Pundamilia_nyererei
ENSSSCG00000005704	EXOSC2	100	80.952	ENSPNAG00000014281	exosc2	100	80.952	Pygocentrus_nattereri
ENSSSCG00000005704	EXOSC2	100	95.563	ENSRNOG00000009245	Exosc2	100	95.563	Rattus_norvegicus
ENSSSCG00000005704	EXOSC2	100	96.928	ENSRBIG00000031203	-	100	96.928	Rhinopithecus_bieti
ENSSSCG00000005704	EXOSC2	99	90.753	ENSRBIG00000029791	-	99	90.753	Rhinopithecus_bieti
ENSSSCG00000005704	EXOSC2	99	89.041	ENSRROG00000043609	-	99	89.041	Rhinopithecus_roxellana
ENSSSCG00000005704	EXOSC2	100	96.928	ENSRROG00000010827	-	100	96.928	Rhinopithecus_roxellana
ENSSSCG00000005704	EXOSC2	89	42.230	YHR069C	-	82	42.230	Saccharomyces_cerevisiae
ENSSSCG00000005704	EXOSC2	100	97.611	ENSSBOG00000022712	EXOSC2	100	97.611	Saimiri_boliviensis_boliviensis
ENSSSCG00000005704	EXOSC2	100	92.150	ENSSHAG00000016050	EXOSC2	100	92.150	Sarcophilus_harrisii
ENSSSCG00000005704	EXOSC2	100	80.205	ENSSFOG00015011245	exosc2	100	80.205	Scleropages_formosus
ENSSSCG00000005704	EXOSC2	100	77.474	ENSSMAG00000003112	exosc2	100	77.474	Scophthalmus_maximus
ENSSSCG00000005704	EXOSC2	100	77.703	ENSSDUG00000004634	exosc2	100	77.703	Seriola_dumerili
ENSSSCG00000005704	EXOSC2	100	78.498	ENSSLDG00000010616	exosc2	100	78.498	Seriola_lalandi_dorsalis
ENSSSCG00000005704	EXOSC2	99	88.475	ENSSPUG00000013391	EXOSC2	99	88.475	Sphenodon_punctatus
ENSSSCG00000005704	EXOSC2	100	78.840	ENSSPAG00000022947	exosc2	100	78.840	Stegastes_partitus
ENSSSCG00000005704	EXOSC2	99	83.562	ENSTGUG00000004697	EXOSC2	99	83.562	Taeniopygia_guttata
ENSSSCG00000005704	EXOSC2	100	75.085	ENSTRUG00000022436	exosc2	100	75.085	Takifugu_rubripes
ENSSSCG00000005704	EXOSC2	100	90.444	ENSTTRG00000015159	EXOSC2	100	90.444	Tursiops_truncatus
ENSSSCG00000005704	EXOSC2	95	94.224	ENSUAMG00000009651	EXOSC2	99	94.224	Ursus_americanus
ENSSSCG00000005704	EXOSC2	100	96.587	ENSUMAG00000018726	EXOSC2	100	96.587	Ursus_maritimus
ENSSSCG00000005704	EXOSC2	100	96.246	ENSVVUG00000027665	EXOSC2	100	96.246	Vulpes_vulpes
ENSSSCG00000005704	EXOSC2	100	79.863	ENSXETG00000001340	exosc2	100	79.863	Xenopus_tropicalis
ENSSSCG00000005704	EXOSC2	99	77.397	ENSXMAG00000005265	exosc2	99	77.397	Xiphophorus_maculatus