EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000005914 (Gene tree)
Gene ID: 100526216
Gene Symbol: SHARPIN
Alias: DKFZP434N1923|SIPL1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 7903 bases
Position: chr4:601081-608983
Accession: 100526216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036621	zf-RanBP	PF00641.18	3.3e-06	1	1
ENSSSCP00000006323	zf-RanBP	PF00641.18	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000047643	SHARPIN-202	4423	XM_003481320	ENSSSCP00000036621	355 (aa)	XP_003481368	A0A286ZYS7
ENSSSCT00000006494	SHARPIN-201	4552	XM_003125446	ENSSSCP00000006323	398 (aa)	XP_003125494	F1RSN0

Gene Model

Click here to download ENSSSCG00000005914's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04217	Necroptosis	KEGG
ssc04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000005914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000005914	SHARPIN	87	77.716	ENSG00000179526	SHARPIN	100	77.895	Homo_sapiens
ENSSSCG00000005914	SHARPIN	94	83.733	ENSAMEG00000006042	SHARPIN	99	85.124	Ailuropoda_melanoleuca
ENSSSCG00000005914	SHARPIN	71	75.862	ENSACAG00000007245	-	53	40.992	Anolis_carolinensis
ENSSSCG00000005914	SHARPIN	99	77.340	ENSCAFG00000001536	SHARPIN	98	80.274	Canis_familiaris
ENSSSCG00000005914	SHARPIN	91	78.133	ENSCCAG00000036190	SHARPIN	97	78.075	Cebus_capucinus
ENSSSCG00000005914	SHARPIN	82	67.456	ENSDORG00000008469	Sharpin	100	66.864	Dipodomys_ordii
ENSSSCG00000005914	SHARPIN	99	82.809	ENSECAG00000002550	-	97	84.040	Equus_caballus
ENSSSCG00000005914	SHARPIN	94	84.375	ENSECAG00000001400	SHARPIN	92	85.753	Equus_caballus
ENSSSCG00000005914	SHARPIN	87	83.714	ENSFCAG00000011548	SHARPIN	97	83.836	Felis_catus
ENSSSCG00000005914	SHARPIN	87	38.817	ENSGALG00000048524	SHARPIN	80	39.130	Gallus_gallus
ENSSSCG00000005914	SHARPIN	78	75.232	ENSGGOG00000027471	SHARPIN	98	75.232	Gorilla_gorilla
ENSSSCG00000005914	SHARPIN	87	84.286	ENSPPRG00000015953	SHARPIN	97	84.384	Panthera_pardus
ENSSSCG00000005914	SHARPIN	78	83.013	ENSPTIG00000016864	SHARPIN	83	83.013	Panthera_tigris_altaica
ENSSSCG00000005914	SHARPIN	60	40.493	ENSSPUG00000017933	SHARPIN	75	41.304	Sphenodon_punctatus
ENSSSCG00000005914	SHARPIN	68	74.754	ENSUMAG00000020808	SHARPIN	87	74.754	Ursus_maritimus