EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000006110 (Gene tree)
Gene ID: 100514101
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 17216 bases
Position: chr4:42946778-42963993
Accession: 100514101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052060	RRM_1	PF00076.22	8.1e-27	1	1
ENSSSCP00000054966	RRM_1	PF00076.22	8.1e-27	1	1
ENSSSCP00000006522	RRM_1	PF00076.22	1.7e-26	1	1
ENSSSCP00000051608	RRM_1	PF00076.22	1.4e-20	1	2
ENSSSCP00000051608	RRM_1	PF00076.22	1.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000006702	RBM12B-201	3363	-	ENSSSCP00000006522	1120 (aa)	-	F1RY40
ENSSSCT00000059771	RBM12B-204	3686	-	ENSSSCP00000054966	986 (aa)	-	A0A287BFR0
ENSSSCT00000051303	RBM12B-202	3141	-	ENSSSCP00000051608	856 (aa)	-	A0A287B692
ENSSSCT00000061181	RBM12B-203	8013	XM_003125566	ENSSSCP00000052060	986 (aa)	XP_003125614	A0A287BFR0

Gene Model

Click here to download ENSSSCG00000006110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000006110	RBM12B	51	72.414	ENSSSCG00000036156	RBM12	54	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006110	RBM12B	100	86.014	ENSG00000183808	RBM12B	100	98.780	Homo_sapiens
ENSSSCG00000006110	RBM12B	57	45.333	ENSAPOG00000013963	rbm12b	86	45.333	Acanthochromis_polyacanthus
ENSSSCG00000006110	RBM12B	100	81.677	ENSAMEG00000007134	RBM12B	100	82.307	Ailuropoda_melanoleuca
ENSSSCG00000006110	RBM12B	57	40.246	ENSACIG00000014943	rbm12b	99	39.458	Amphilophus_citrinellus
ENSSSCG00000006110	RBM12B	57	48.000	ENSAOCG00000024270	rbm12b	86	48.000	Amphiprion_ocellaris
ENSSSCG00000006110	RBM12B	56	44.615	ENSAPEG00000022079	rbm12b	98	38.690	Amphiprion_percula
ENSSSCG00000006110	RBM12B	57	44.000	ENSATEG00000004578	rbm12b	85	44.000	Anabas_testudineus
ENSSSCG00000006110	RBM12B	73	63.333	ENSAPLG00000002020	RBM12B	100	63.333	Anas_platyrhynchos
ENSSSCG00000006110	RBM12B	100	36.847	ENSACAG00000003463	RBM12B	100	37.148	Anolis_carolinensis
ENSSSCG00000006110	RBM12B	99	84.247	ENSANAG00000034015	RBM12B	98	84.464	Aotus_nancymaae
ENSSSCG00000006110	RBM12B	52	45.333	ENSACLG00000005578	rbm12b	77	45.333	Astatotilapia_calliptera
ENSSSCG00000006110	RBM12B	57	45.333	ENSACLG00000005575	rbm12b	85	45.333	Astatotilapia_calliptera
ENSSSCG00000006110	RBM12B	57	44.000	ENSAMXG00000041973	rbm12b	87	44.000	Astyanax_mexicanus
ENSSSCG00000006110	RBM12B	99	84.342	ENSBTAG00000013408	RBM12B	100	81.237	Bos_taurus
ENSSSCG00000006110	RBM12B	100	91.549	ENSCAFG00000009109	RBM12B	100	91.549	Canis_familiaris
ENSSSCG00000006110	RBM12B	99	86.050	ENSCAFG00020012203	RBM12B	100	81.643	Canis_lupus_dingo
ENSSSCG00000006110	RBM12B	99	88.537	ENSCHIG00000006790	RBM12B	88	88.688	Capra_hircus
ENSSSCG00000006110	RBM12B	100	86.103	ENSTSYG00000012515	RBM12B	100	86.103	Carlito_syrichta
ENSSSCG00000006110	RBM12B	100	80.832	ENSCAPG00000003543	RBM12B	100	82.150	Cavia_aperea
ENSSSCG00000006110	RBM12B	100	80.832	ENSCPOG00000007815	RBM12B	100	82.150	Cavia_porcellus
ENSSSCG00000006110	RBM12B	99	83.607	ENSCATG00000030769	RBM12B	100	77.383	Cercocebus_atys
ENSSSCG00000006110	RBM12B	100	82.252	ENSCLAG00000017617	RBM12B	100	82.150	Chinchilla_lanigera
ENSSSCG00000006110	RBM12B	100	86.014	ENSCSAG00000018559	RBM12B	100	86.014	Chlorocebus_sabaeus
ENSSSCG00000006110	RBM12B	99	84.053	ENSCHOG00000008934	RBM12B	100	85.098	Choloepus_hoffmanni
ENSSSCG00000006110	RBM12B	71	63.636	ENSCPBG00000003061	RBM12B	100	63.636	Chrysemys_picta_bellii
ENSSSCG00000006110	RBM12B	100	84.685	ENSCANG00000030379	RBM12B	100	77.890	Colobus_angolensis_palliatus
ENSSSCG00000006110	RBM12B	100	74.049	ENSCGRG00001008710	-	98	74.397	Cricetulus_griseus_chok1gshd
ENSSSCG00000006110	RBM12B	57	48.000	ENSCSEG00000004610	rbm12b	82	48.000	Cynoglossus_semilaevis
ENSSSCG00000006110	RBM12B	57	46.667	ENSCVAG00000011047	rbm12b	86	46.667	Cyprinodon_variegatus
ENSSSCG00000006110	RBM12B	56	33.482	ENSCVAG00000009259	-	99	33.482	Cyprinodon_variegatus
ENSSSCG00000006110	RBM12B	59	42.667	ENSDARG00000079717	rbm12b	81	42.667	Danio_rerio
ENSSSCG00000006110	RBM12B	56	30.165	ENSDARG00000055889	zgc:153215	99	30.018	Danio_rerio
ENSSSCG00000006110	RBM12B	100	85.347	ENSDNOG00000041608	RBM12B	100	82.970	Dasypus_novemcinctus
ENSSSCG00000006110	RBM12B	99	76.498	ENSDORG00000024034	-	100	78.093	Dipodomys_ordii
ENSSSCG00000006110	RBM12B	74	73.194	ENSETEG00000013005	-	84	74.157	Echinops_telfairi
ENSSSCG00000006110	RBM12B	63	31.385	ENSEBUG00000009015	-	99	31.385	Eptatretus_burgeri
ENSSSCG00000006110	RBM12B	99	85.356	ENSEASG00005016297	RBM12B	100	81.237	Equus_asinus_asinus
ENSSSCG00000006110	RBM12B	100	90.974	ENSECAG00000017870	RBM12B	100	90.974	Equus_caballus
ENSSSCG00000006110	RBM12B	100	86.702	ENSFCAG00000029274	RBM12B	100	86.702	Felis_catus
ENSSSCG00000006110	RBM12B	72	61.871	ENSFALG00000014893	RBM12B	100	61.871	Ficedula_albicollis
ENSSSCG00000006110	RBM12B	100	80.851	ENSFDAG00000005576	RBM12B	98	80.876	Fukomys_damarensis
ENSSSCG00000006110	RBM12B	56	30.021	ENSFHEG00000014539	zgc:153215	96	30.021	Fundulus_heteroclitus
ENSSSCG00000006110	RBM12B	57	46.667	ENSFHEG00000016425	rbm12b	85	46.667	Fundulus_heteroclitus
ENSSSCG00000006110	RBM12B	57	46.575	ENSGMOG00000013467	rbm12b	86	46.575	Gadus_morhua
ENSSSCG00000006110	RBM12B	75	60.667	ENSGALG00000035129	RBM12B	100	60.667	Gallus_gallus
ENSSSCG00000006110	RBM12B	56	30.604	ENSGAFG00000007845	zgc:153215	98	30.604	Gambusia_affinis
ENSSSCG00000006110	RBM12B	57	46.667	ENSGAFG00000007224	rbm12b	86	46.667	Gambusia_affinis
ENSSSCG00000006110	RBM12B	57	45.333	ENSGACG00000008682	rbm12b	85	45.333	Gasterosteus_aculeatus
ENSSSCG00000006110	RBM12B	71	64.122	ENSGAGG00000009774	RBM12B	100	64.122	Gopherus_agassizii
ENSSSCG00000006110	RBM12B	100	76.089	ENSGGOG00000011909	RBM12B	100	76.292	Gorilla_gorilla
ENSSSCG00000006110	RBM12B	59	45.333	ENSHBUG00000016227	rbm12b	87	45.333	Haplochromis_burtoni
ENSSSCG00000006110	RBM12B	100	80.986	ENSHGLG00000009063	RBM12B	100	82.573	Heterocephalus_glaber_female
ENSSSCG00000006110	RBM12B	100	80.986	ENSHGLG00100021324	RBM12B	100	82.573	Heterocephalus_glaber_male
ENSSSCG00000006110	RBM12B	57	48.000	ENSHCOG00000014952	rbm12b	89	48.000	Hippocampus_comes
ENSSSCG00000006110	RBM12B	56	30.657	ENSIPUG00000019731	zgc:153215	99	30.657	Ictalurus_punctatus
ENSSSCG00000006110	RBM12B	59	47.191	ENSIPUG00000001167	RBM12B	85	47.191	Ictalurus_punctatus
ENSSSCG00000006110	RBM12B	100	83.747	ENSSTOG00000027445	RBM12B	100	76.471	Ictidomys_tridecemlineatus
ENSSSCG00000006110	RBM12B	99	75.556	ENSJJAG00000004165	-	100	73.834	Jaculus_jaculus
ENSSSCG00000006110	RBM12B	57	45.946	ENSKMAG00000013715	rbm12b	86	45.946	Kryptolebias_marmoratus
ENSSSCG00000006110	RBM12B	56	30.223	ENSKMAG00000004958	zgc:153215	99	30.223	Kryptolebias_marmoratus
ENSSSCG00000006110	RBM12B	57	45.946	ENSKMAG00000013704	rbm12b	83	45.946	Kryptolebias_marmoratus
ENSSSCG00000006110	RBM12B	56	30.966	ENSLBEG00000002597	zgc:153215	99	31.164	Labrus_bergylta
ENSSSCG00000006110	RBM12B	65	52.941	ENSLACG00000007177	RBM12B	99	52.941	Latimeria_chalumnae
ENSSSCG00000006110	RBM12B	58	50.667	ENSLOCG00000018344	rbm12b	87	50.667	Lepisosteus_oculatus
ENSSSCG00000006110	RBM12B	100	79.100	ENSLAFG00000029949	RBM12B	100	79.100	Loxodonta_africana
ENSSSCG00000006110	RBM12B	100	84.985	ENSMFAG00000045430	RBM12B	100	77.992	Macaca_fascicularis
ENSSSCG00000006110	RBM12B	100	86.014	ENSMMUG00000005558	RBM12B	100	86.014	Macaca_mulatta
ENSSSCG00000006110	RBM12B	100	84.985	ENSMNEG00000041292	RBM12B	100	77.992	Macaca_nemestrina
ENSSSCG00000006110	RBM12B	100	76.775	ENSMLEG00000037288	RBM12B	100	79.006	Mandrillus_leucophaeus
ENSSSCG00000006110	RBM12B	57	48.000	ENSMAMG00000011998	rbm12b	86	48.000	Mastacembelus_armatus
ENSSSCG00000006110	RBM12B	57	45.333	ENSMZEG00005014845	rbm12b	85	44.444	Maylandia_zebra
ENSSSCG00000006110	RBM12B	57	45.333	ENSMZEG00005015005	rbm12b	86	45.333	Maylandia_zebra
ENSSSCG00000006110	RBM12B	57	59.687	ENSMGAG00000011985	RBM12B	99	59.375	Meleagris_gallopavo
ENSSSCG00000006110	RBM12B	100	75.069	ENSMAUG00000021752	-	100	75.069	Mesocricetus_auratus
ENSSSCG00000006110	RBM12B	100	84.189	ENSMICG00000036969	RBM12B	100	84.911	Microcebus_murinus
ENSSSCG00000006110	RBM12B	100	73.955	ENSMOCG00000005603	-	100	65.587	Microtus_ochrogaster
ENSSSCG00000006110	RBM12B	57	45.946	ENSMMOG00000002404	rbm12b	70	68.293	Mola_mola
ENSSSCG00000006110	RBM12B	100	66.087	ENSMODG00000007436	RBM12B	99	66.087	Monodelphis_domestica
ENSSSCG00000006110	RBM12B	57	47.436	ENSMALG00000012059	rbm12b	85	47.436	Monopterus_albus
ENSSSCG00000006110	RBM12B	100	71.854	ENSMUSG00000046667	Rbm12b1	100	71.854	Mus_musculus
ENSSSCG00000006110	RBM12B	100	73.633	ENSMUSG00000052137	Rbm12b2	100	70.728	Mus_musculus
ENSSSCG00000006110	RBM12B	100	71.719	MGP_SPRETEiJ_G0026766	-	100	71.719	Mus_spretus
ENSSSCG00000006110	RBM12B	100	65.060	MGP_SPRETEiJ_G0026765	-	100	68.649	Mus_spretus
ENSSSCG00000006110	RBM12B	100	90.619	ENSMPUG00000018637	RBM12B	100	90.619	Mustela_putorius_furo
ENSSSCG00000006110	RBM12B	100	79.658	ENSMLUG00000002359	RBM12B	100	80.242	Myotis_lucifugus
ENSSSCG00000006110	RBM12B	99	76.408	ENSNGAG00000002801	-	100	78.419	Nannospalax_galili
ENSSSCG00000006110	RBM12B	57	45.333	ENSNBRG00000015057	rbm12b	86	45.333	Neolamprologus_brichardi
ENSSSCG00000006110	RBM12B	100	77.632	ENSNLEG00000032050	RBM12B	100	79.310	Nomascus_leucogenys
ENSSSCG00000006110	RBM12B	100	79.154	ENSODEG00000019204	RBM12B	100	80.832	Octodon_degus
ENSSSCG00000006110	RBM12B	57	45.333	ENSONIG00000020612	rbm12b	86	45.333	Oreochromis_niloticus
ENSSSCG00000006110	RBM12B	73	66.667	ENSOANG00000015735	-	98	66.667	Ornithorhynchus_anatinus
ENSSSCG00000006110	RBM12B	100	79.869	ENSOCUG00000010353	RBM12B	100	75.025	Oryctolagus_cuniculus
ENSSSCG00000006110	RBM12B	57	48.000	ENSORLG00000008228	rbm12b	83	48.000	Oryzias_latipes
ENSSSCG00000006110	RBM12B	57	48.000	ENSORLG00020013619	rbm12b	83	48.000	Oryzias_latipes_hni
ENSSSCG00000006110	RBM12B	57	48.000	ENSORLG00015019999	rbm12b	83	48.000	Oryzias_latipes_hsok
ENSSSCG00000006110	RBM12B	57	49.333	ENSOMEG00000022523	rbm12b	84	49.333	Oryzias_melastigma
ENSSSCG00000006110	RBM12B	100	85.196	ENSOGAG00000002979	RBM12B	100	85.196	Otolemur_garnettii
ENSSSCG00000006110	RBM12B	100	85.137	ENSPTIG00000020071	RBM12B	100	85.137	Panthera_tigris_altaica
ENSSSCG00000006110	RBM12B	99	84.988	ENSPTRG00000020420	RBM12B	99	84.988	Pan_troglodytes
ENSSSCG00000006110	RBM12B	100	76.876	ENSPANG00000035535	RBM12B	100	79.108	Papio_anubis
ENSSSCG00000006110	RBM12B	56	32.948	ENSPKIG00000014851	zgc:153215	99	32.948	Paramormyrops_kingsleyae
ENSSSCG00000006110	RBM12B	57	49.333	ENSPKIG00000018719	rbm12b	86	49.333	Paramormyrops_kingsleyae
ENSSSCG00000006110	RBM12B	71	63.636	ENSPSIG00000001348	RBM12B	100	63.636	Pelodiscus_sinensis
ENSSSCG00000006110	RBM12B	100	75.272	ENSPEMG00000008279	-	100	75.272	Peromyscus_maniculatus_bairdii
ENSSSCG00000006110	RBM12B	100	66.087	ENSPCIG00000008556	RBM12B	100	66.087	Phascolarctos_cinereus
ENSSSCG00000006110	RBM12B	60	40.657	ENSPFOG00000020937	rbm12b	89	41.922	Poecilia_formosa
ENSSSCG00000006110	RBM12B	60	40.283	ENSPLAG00000018782	rbm12b	92	41.532	Poecilia_latipinna
ENSSSCG00000006110	RBM12B	59	40.952	ENSPMEG00000011418	rbm12b	89	41.598	Poecilia_mexicana
ENSSSCG00000006110	RBM12B	60	40.486	ENSPREG00000020770	rbm12b	89	41.532	Poecilia_reticulata
ENSSSCG00000006110	RBM12B	100	85.814	ENSPPYG00000018745	RBM12B	100	85.814	Pongo_abelii
ENSSSCG00000006110	RBM12B	99	83.029	ENSPCOG00000023546	RBM12B	100	79.053	Propithecus_coquereli
ENSSSCG00000006110	RBM12B	100	82.759	ENSPVAG00000011803	RBM12B	100	84.483	Pteropus_vampyrus
ENSSSCG00000006110	RBM12B	57	45.333	ENSPNYG00000016696	rbm12b	86	45.333	Pundamilia_nyererei
ENSSSCG00000006110	RBM12B	57	50.667	ENSPNAG00000008126	rbm12b	84	50.667	Pygocentrus_nattereri
ENSSSCG00000006110	RBM12B	56	31.532	ENSPNAG00000025628	zgc:153215	99	31.532	Pygocentrus_nattereri
ENSSSCG00000006110	RBM12B	99	70.765	ENSRNOG00000055292	LOC679087	95	70.765	Rattus_norvegicus
ENSSSCG00000006110	RBM12B	99	70.765	ENSRNOG00000016330	Rbm12b	100	63.094	Rattus_norvegicus
ENSSSCG00000006110	RBM12B	94	86.795	ENSRBIG00000035046	RBM12B	100	78.651	Rhinopithecus_bieti
ENSSSCG00000006110	RBM12B	100	86.667	ENSRROG00000023660	RBM12B	100	76.166	Rhinopithecus_roxellana
ENSSSCG00000006110	RBM12B	100	73.988	ENSSBOG00000027592	RBM12B	100	77.845	Saimiri_boliviensis_boliviensis
ENSSSCG00000006110	RBM12B	98	65.217	ENSSHAG00000015335	RBM12B	100	65.217	Sarcophilus_harrisii
ENSSSCG00000006110	RBM12B	57	48.000	ENSSFOG00015001584	rbm12b	85	48.000	Scleropages_formosus
ENSSSCG00000006110	RBM12B	56	34.608	ENSSFOG00015009427	zgc:153215	99	34.608	Scleropages_formosus
ENSSSCG00000006110	RBM12B	57	46.667	ENSSMAG00000019708	rbm12b	86	46.667	Scophthalmus_maximus
ENSSSCG00000006110	RBM12B	57	46.667	ENSSDUG00000006856	rbm12b	86	46.667	Seriola_dumerili
ENSSSCG00000006110	RBM12B	57	46.667	ENSSLDG00000016156	rbm12b	86	46.667	Seriola_lalandi_dorsalis
ENSSSCG00000006110	RBM12B	94	82.742	ENSSARG00000011845	-	85	82.742	Sorex_araneus
ENSSSCG00000006110	RBM12B	59	55.701	ENSSPUG00000016954	RBM12B	94	55.701	Sphenodon_punctatus
ENSSSCG00000006110	RBM12B	57	46.667	ENSSPAG00000006774	rbm12b	87	46.667	Stegastes_partitus
ENSSSCG00000006110	RBM12B	59	56.783	ENSTGUG00000011860	RBM12B	100	56.783	Taeniopygia_guttata
ENSSSCG00000006110	RBM12B	57	48.000	ENSTRUG00000013738	rbm12b	86	48.000	Takifugu_rubripes
ENSSSCG00000006110	RBM12B	90	83.648	ENSTBEG00000000449	RBM12B	82	83.648	Tupaia_belangeri
ENSSSCG00000006110	RBM12B	100	91.793	ENSUAMG00000023639	RBM12B	100	82.150	Ursus_americanus
ENSSSCG00000006110	RBM12B	94	85.907	ENSUMAG00000016008	RBM12B	100	84.990	Ursus_maritimus
ENSSSCG00000006110	RBM12B	88	96.907	ENSVPAG00000001080	RBM12B	90	96.907	Vicugna_pacos
ENSSSCG00000006110	RBM12B	99	86.180	ENSVVUG00000002694	RBM12B	100	81.744	Vulpes_vulpes
ENSSSCG00000006110	RBM12B	57	30.000	ENSXETG00000025920	-	98	30.000	Xenopus_tropicalis
ENSSSCG00000006110	RBM12B	62	43.836	ENSXETG00000014696	rbm12b	90	39.806	Xenopus_tropicalis
ENSSSCG00000006110	RBM12B	63	47.000	ENSXETG00000014694	rbm12b	100	46.612	Xenopus_tropicalis
ENSSSCG00000006110	RBM12B	56	30.097	ENSXCOG00000019654	zgc:153215	98	30.291	Xiphophorus_couchianus
ENSSSCG00000006110	RBM12B	60	40.452	ENSXMAG00000014213	rbm12b	92	41.046	Xiphophorus_maculatus