EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006251 (Gene tree)
Gene ID: 100157730
Gene Symbol: TGS1
Alias: NCOA6IP|PIMT
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 32032 bases
Position: chr4:75937129-75969160
Accession: 100157730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000006664	Methyltransf_15	PF09445.10	4.3e-23	1	1
ENSSSCP00000024820	Methyltransf_15	PF09445.10	4.6e-23	1	1
ENSSSCP00000006664	UPF0020	PF01170.18	3.2e-06	1	1
ENSSSCP00000024820	UPF0020	PF01170.18	3.5e-06	1	1
ENSSSCP00000006664	Met_10	PF02475.16	9.5e-07	1	1
ENSSSCP00000024820	Met_10	PF02475.16	1e-06	1	1
ENSSSCP00000006664	Methyltransf_31	PF13847.6	1.6e-07	1	1
ENSSSCP00000024820	Methyltransf_31	PF13847.6	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000006850	TGS1-202	2250	-	ENSSSCP00000006664	749 (aa)	-	F1RT52
ENSSSCT00000032365	TGS1-201	4418	XM_001927876	ENSSSCP00000024820	779 (aa)	XP_001927911	I3LL53

Gene Model

Click here to download ENSSSCG00000006251's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006251	TGS1	98	71.576	ENSG00000137574	TGS1	90	70.930	Homo_sapiens
ENSSSCG00000006251	TGS1	68	36.314	ENSAPOG00000004321	-	91	37.477	Acanthochromis_polyacanthus
ENSSSCG00000006251	TGS1	98	75.613	ENSAMEG00000001781	TGS1	90	75.871	Ailuropoda_melanoleuca
ENSSSCG00000006251	TGS1	95	33.122	ENSAOCG00000022799	lyn	72	36.305	Amphiprion_ocellaris
ENSSSCG00000006251	TGS1	76	35.588	ENSAPEG00000019723	TGS1	92	36.791	Amphiprion_percula
ENSSSCG00000006251	TGS1	96	33.504	ENSATEG00000005927	lyn	88	32.921	Anabas_testudineus
ENSSSCG00000006251	TGS1	81	47.964	ENSAPLG00000006073	-	93	48.926	Anas_platyrhynchos
ENSSSCG00000006251	TGS1	98	46.811	ENSACAG00000017988	TGS1	83	46.220	Anolis_carolinensis
ENSSSCG00000006251	TGS1	98	63.953	ENSANAG00000035525	TGS1	90	62.791	Aotus_nancymaae
ENSSSCG00000006251	TGS1	76	38.605	ENSACLG00000000261	lyn	88	34.881	Astatotilapia_calliptera
ENSSSCG00000006251	TGS1	95	36.036	ENSAMXG00000014086	lyn	87	35.279	Astyanax_mexicanus
ENSSSCG00000006251	TGS1	98	73.057	ENSBTAG00000005898	TGS1	90	73.446	Bos_taurus
ENSSSCG00000006251	TGS1	98	70.413	ENSCJAG00000016657	TGS1	89	70.026	Callithrix_jacchus
ENSSSCG00000006251	TGS1	98	74.839	ENSCAFG00000007011	TGS1	90	75.097	Canis_familiaris
ENSSSCG00000006251	TGS1	98	74.839	ENSCAFG00020015485	TGS1	91	75.097	Canis_lupus_dingo
ENSSSCG00000006251	TGS1	98	71.669	ENSCHIG00000013976	TGS1	90	72.445	Capra_hircus
ENSSSCG00000006251	TGS1	98	70.634	ENSTSYG00000000171	TGS1	90	70.246	Carlito_syrichta
ENSSSCG00000006251	TGS1	98	60.893	ENSCAPG00000013732	TGS1	89	60.893	Cavia_aperea
ENSSSCG00000006251	TGS1	98	65.718	ENSCPOG00000009713	TGS1	90	65.718	Cavia_porcellus
ENSSSCG00000006251	TGS1	98	70.839	ENSCCAG00000030476	TGS1	89	70.839	Cebus_capucinus
ENSSSCG00000006251	TGS1	98	71.613	ENSCATG00000035375	TGS1	90	71.484	Cercocebus_atys
ENSSSCG00000006251	TGS1	98	66.623	ENSCLAG00000009468	TGS1	90	66.494	Chinchilla_lanigera
ENSSSCG00000006251	TGS1	98	71.447	ENSCSAG00000014611	TGS1	97	71.318	Chlorocebus_sabaeus
ENSSSCG00000006251	TGS1	98	69.290	ENSCHOG00000001462	TGS1	90	69.419	Choloepus_hoffmanni
ENSSSCG00000006251	TGS1	98	52.344	ENSCPBG00000004958	TGS1	91	52.304	Chrysemys_picta_bellii
ENSSSCG00000006251	TGS1	98	70.801	ENSCANG00000041389	TGS1	90	70.543	Colobus_angolensis_palliatus
ENSSSCG00000006251	TGS1	98	65.071	ENSCGRG00001019470	Tgs1	90	64.812	Cricetulus_griseus_chok1gshd
ENSSSCG00000006251	TGS1	98	64.359	ENSCGRG00000008981	Tgs1	90	64.615	Cricetulus_griseus_crigri
ENSSSCG00000006251	TGS1	97	34.304	ENSDARG00000107511	lyn	56	71.569	Danio_rerio
ENSSSCG00000006251	TGS1	98	69.419	ENSDNOG00000008353	TGS1	90	69.032	Dasypus_novemcinctus
ENSSSCG00000006251	TGS1	98	66.883	ENSDORG00000012484	Tgs1	90	66.320	Dipodomys_ordii
ENSSSCG00000006251	TGS1	83	70.435	ENSETEG00000005126	TGS1	80	70.435	Echinops_telfairi
ENSSSCG00000006251	TGS1	98	75.840	ENSEASG00005016371	TGS1	93	76.098	Equus_asinus_asinus
ENSSSCG00000006251	TGS1	98	75.452	ENSECAG00000019399	TGS1	95	75.711	Equus_caballus
ENSSSCG00000006251	TGS1	69	93.939	ENSEEUG00000001735	TGS1	63	93.939	Erinaceus_europaeus
ENSSSCG00000006251	TGS1	98	35.480	ENSELUG00000012537	lyn	89	36.262	Esox_lucius
ENSSSCG00000006251	TGS1	98	74.452	ENSFCAG00000011478	TGS1	90	75.226	Felis_catus
ENSSSCG00000006251	TGS1	90	47.390	ENSFALG00000010249	TGS1	90	47.613	Ficedula_albicollis
ENSSSCG00000006251	TGS1	98	67.575	ENSFDAG00000011405	TGS1	90	67.056	Fukomys_damarensis
ENSSSCG00000006251	TGS1	98	45.226	ENSGALG00000015340	TGS1	88	46.221	Gallus_gallus
ENSSSCG00000006251	TGS1	98	50.920	ENSGAGG00000019590	TGS1	91	51.656	Gopherus_agassizii
ENSSSCG00000006251	TGS1	98	71.705	ENSGGOG00000008624	TGS1	90	71.576	Gorilla_gorilla
ENSSSCG00000006251	TGS1	74	36.905	ENSHBUG00000003518	lyn	95	37.124	Haplochromis_burtoni
ENSSSCG00000006251	TGS1	76	65.896	ENSHGLG00000000284	TGS1	78	77.273	Heterocephalus_glaber_female
ENSSSCG00000006251	TGS1	98	35.480	ENSHCOG00000014161	lyn	90	34.898	Hippocampus_comes
ENSSSCG00000006251	TGS1	77	38.033	ENSIPUG00000002294	tgs1	89	34.921	Ictalurus_punctatus
ENSSSCG00000006251	TGS1	98	68.886	ENSSTOG00000009597	TGS1	90	68.353	Ictidomys_tridecemlineatus
ENSSSCG00000006251	TGS1	98	64.249	ENSJJAG00000016239	Tgs1	91	63.990	Jaculus_jaculus
ENSSSCG00000006251	TGS1	76	37.542	ENSLBEG00000027341	-	86	34.375	Labrus_bergylta
ENSSSCG00000006251	TGS1	98	43.985	ENSLACG00000008074	TGS1	94	44.175	Latimeria_chalumnae
ENSSSCG00000006251	TGS1	98	38.733	ENSLOCG00000005492	lyn	89	39.157	Lepisosteus_oculatus
ENSSSCG00000006251	TGS1	98	68.340	ENSLAFG00000015386	TGS1	90	67.912	Loxodonta_africana
ENSSSCG00000006251	TGS1	98	71.742	ENSMFAG00000029838	TGS1	90	71.484	Macaca_fascicularis
ENSSSCG00000006251	TGS1	98	71.613	ENSMMUG00000005478	TGS1	91	71.484	Macaca_mulatta
ENSSSCG00000006251	TGS1	98	71.097	ENSMNEG00000023719	TGS1	90	70.839	Macaca_nemestrina
ENSSSCG00000006251	TGS1	98	71.613	ENSMLEG00000034807	TGS1	90	71.484	Mandrillus_leucophaeus
ENSSSCG00000006251	TGS1	82	76.642	ENSMAMG00000009542	TGS1	72	76.642	Mastacembelus_armatus
ENSSSCG00000006251	TGS1	76	38.776	ENSMZEG00005015681	lyn	88	35.006	Maylandia_zebra
ENSSSCG00000006251	TGS1	85	45.852	ENSMGAG00000010966	TGS1	85	46.954	Meleagris_gallopavo
ENSSSCG00000006251	TGS1	98	65.128	ENSMAUG00000009875	Tgs1	90	65.032	Mesocricetus_auratus
ENSSSCG00000006251	TGS1	98	72.481	ENSMICG00000011199	TGS1	90	72.481	Microcebus_murinus
ENSSSCG00000006251	TGS1	98	64.903	ENSMOCG00000019560	Tgs1	90	64.645	Microtus_ochrogaster
ENSSSCG00000006251	TGS1	87	58.522	ENSMODG00000009174	TGS1	87	58.824	Monodelphis_domestica
ENSSSCG00000006251	TGS1	98	60.000	MGP_CAROLIEiJ_G0025780	-	91	59.618	Mus_caroli
ENSSSCG00000006251	TGS1	98	64.166	MGP_CAROLIEiJ_G0025779	-	89	63.777	Mus_caroli
ENSSSCG00000006251	TGS1	98	64.036	ENSMUSG00000028233	Tgs1	89	63.648	Mus_musculus
ENSSSCG00000006251	TGS1	98	60.610	MGP_PahariEiJ_G0023902	-	91	60.229	Mus_pahari
ENSSSCG00000006251	TGS1	98	64.903	MGP_PahariEiJ_G0023901	-	89	64.516	Mus_pahari
ENSSSCG00000006251	TGS1	98	63.777	MGP_SPRETEiJ_G0026727	-	89	63.389	Mus_spretus
ENSSSCG00000006251	TGS1	54	92.647	MGP_SPRETEiJ_G0026726	-	82	92.647	Mus_spretus
ENSSSCG00000006251	TGS1	98	74.710	ENSMPUG00000010475	TGS1	97	74.839	Mustela_putorius_furo
ENSSSCG00000006251	TGS1	98	73.834	ENSMLUG00000014857	TGS1	90	73.705	Myotis_lucifugus
ENSSSCG00000006251	TGS1	98	66.366	ENSNGAG00000019532	Tgs1	90	65.677	Nannospalax_galili
ENSSSCG00000006251	TGS1	98	71.854	ENSNLEG00000001101	TGS1	90	71.576	Nomascus_leucogenys
ENSSSCG00000006251	TGS1	95	57.382	ENSMEUG00000001697	TGS1	88	58.014	Notamacropus_eugenii
ENSSSCG00000006251	TGS1	98	63.279	ENSODEG00000002948	TGS1	94	62.908	Octodon_degus
ENSSSCG00000006251	TGS1	77	36.597	ENSONIG00000006339	lyn	81	35.955	Oreochromis_niloticus
ENSSSCG00000006251	TGS1	90	55.874	ENSOANG00000021853	TGS1	88	56.160	Ornithorhynchus_anatinus
ENSSSCG00000006251	TGS1	98	69.987	ENSOCUG00000017522	TGS1	90	69.728	Oryctolagus_cuniculus
ENSSSCG00000006251	TGS1	76	36.975	ENSOMEG00000020174	lyn	86	33.721	Oryzias_melastigma
ENSSSCG00000006251	TGS1	98	69.897	ENSOGAG00000012572	TGS1	90	69.897	Otolemur_garnettii
ENSSSCG00000006251	TGS1	98	71.410	ENSOARG00000014613	TGS1	90	72.186	Ovis_aries
ENSSSCG00000006251	TGS1	98	71.447	ENSPPAG00000039058	TGS1	90	71.318	Pan_paniscus
ENSSSCG00000006251	TGS1	98	74.452	ENSPPRG00000000677	TGS1	90	74.710	Panthera_pardus
ENSSSCG00000006251	TGS1	98	74.323	ENSPTIG00000005122	TGS1	90	74.581	Panthera_tigris_altaica
ENSSSCG00000006251	TGS1	98	71.576	ENSPTRG00000020262	TGS1	90	71.447	Pan_troglodytes
ENSSSCG00000006251	TGS1	98	71.613	ENSPANG00000018910	TGS1	90	71.484	Papio_anubis
ENSSSCG00000006251	TGS1	76	39.280	ENSPKIG00000005454	lyn	60	39.661	Paramormyrops_kingsleyae
ENSSSCG00000006251	TGS1	98	51.229	ENSPSIG00000014983	TGS1	91	52.088	Pelodiscus_sinensis
ENSSSCG00000006251	TGS1	52	68.667	ENSPMGG00000012711	lyn	57	74.453	Periophthalmus_magnuspinnatus
ENSSSCG00000006251	TGS1	98	65.201	ENSPEMG00000007957	Tgs1	90	65.459	Peromyscus_maniculatus_bairdii
ENSSSCG00000006251	TGS1	98	61.667	ENSPCIG00000016232	TGS1	89	61.489	Phascolarctos_cinereus
ENSSSCG00000006251	TGS1	76	37.564	ENSPFOG00000001545	-	87	37.457	Poecilia_formosa
ENSSSCG00000006251	TGS1	95	34.411	ENSPREG00000012261	-	93	33.852	Poecilia_reticulata
ENSSSCG00000006251	TGS1	98	71.835	ENSPPYG00000018597	TGS1	97	70.930	Pongo_abelii
ENSSSCG00000006251	TGS1	98	66.969	ENSPCAG00000000143	TGS1	90	66.580	Procavia_capensis
ENSSSCG00000006251	TGS1	98	72.516	ENSPCOG00000013537	TGS1	90	72.294	Propithecus_coquereli
ENSSSCG00000006251	TGS1	98	67.969	ENSPVAG00000016399	TGS1	90	67.578	Pteropus_vampyrus
ENSSSCG00000006251	TGS1	76	37.458	ENSPNYG00000023004	lyn	78	35.180	Pundamilia_nyererei
ENSSSCG00000006251	TGS1	95	36.951	ENSPNAG00000022249	lyn	87	37.694	Pygocentrus_nattereri
ENSSSCG00000006251	TGS1	98	64.387	ENSRNOG00000008156	Tgs1	90	64.258	Rattus_norvegicus
ENSSSCG00000006251	TGS1	98	70.155	ENSRBIG00000041893	TGS1	90	70.026	Rhinopithecus_bieti
ENSSSCG00000006251	TGS1	98	71.576	ENSRROG00000035127	TGS1	90	71.447	Rhinopithecus_roxellana
ENSSSCG00000006251	TGS1	98	71.151	ENSSBOG00000024469	TGS1	97	70.375	Saimiri_boliviensis_boliviensis
ENSSSCG00000006251	TGS1	98	60.358	ENSSHAG00000012878	TGS1	97	60.742	Sarcophilus_harrisii
ENSSSCG00000006251	TGS1	95	35.536	ENSSFOG00015001308	tgs1	87	35.427	Scleropages_formosus
ENSSSCG00000006251	TGS1	76	36.246	ENSSMAG00000019469	lyn	87	34.487	Scophthalmus_maximus
ENSSSCG00000006251	TGS1	95	33.990	ENSSPAG00000002170	lyn	88	34.919	Stegastes_partitus
ENSSSCG00000006251	TGS1	98	46.871	ENSTGUG00000011050	TGS1	91	48.810	Taeniopygia_guttata
ENSSSCG00000006251	TGS1	77	75.182	ENSTNIG00000018133	lyn	89	34.903	Tetraodon_nigroviridis
ENSSSCG00000006251	TGS1	85	61.926	ENSTBEG00000010953	TGS1	78	62.222	Tupaia_belangeri
ENSSSCG00000006251	TGS1	98	68.952	ENSTTRG00000017239	TGS1	90	69.082	Tursiops_truncatus
ENSSSCG00000006251	TGS1	98	75.355	ENSUAMG00000027718	TGS1	91	75.355	Ursus_americanus
ENSSSCG00000006251	TGS1	98	75.355	ENSUMAG00000009761	TGS1	97	75.355	Ursus_maritimus
ENSSSCG00000006251	TGS1	84	66.457	ENSVPAG00000001166	TGS1	77	66.929	Vicugna_pacos
ENSSSCG00000006251	TGS1	98	74.459	ENSVVUG00000017821	TGS1	97	74.710	Vulpes_vulpes
ENSSSCG00000006251	TGS1	98	44.823	ENSXETG00000005648	tgs1	90	43.446	Xenopus_tropicalis