EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006481 (Gene tree)
Gene ID: 100152732
Gene Symbol: GPATCH4
Alias: -
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 9977 bases
Position: chr4:93486365-93496341
Accession: 100152732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000048084	G-patch	PF01585.23	1.7e-09	1	1
ENSSSCP00000006907	G-patch	PF01585.23	1.9e-09	1	1
ENSSSCP00000053044	G-patch	PF01585.23	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000050993	-	5244	-	ENSSSCP00000048084	403 (aa)	-	A0A287AW38
ENSSSCT00000007099	-	3719	-	ENSSSCP00000006907	432 (aa)	-	F1RP33
ENSSSCT00000059295	-	5331	-	ENSSSCP00000053044	432 (aa)	-	F1RP33

Gene Model

Click here to download ENSSSCG00000006481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006481	GPATCH4	78	76.857	ENSG00000160818	GPATCH4	95	93.805	Homo_sapiens
ENSSSCG00000006481	GPATCH4	89	67.677	ENSAMEG00000014829	GPATCH4	98	63.761	Ailuropoda_melanoleuca
ENSSSCG00000006481	GPATCH4	100	69.432	ENSANAG00000035354	GPATCH4	93	74.352	Aotus_nancymaae
ENSSSCG00000006481	GPATCH4	88	71.756	ENSBTAG00000000406	GPATCH4	95	72.774	Bos_taurus
ENSSSCG00000006481	GPATCH4	76	76.012	ENSCJAG00000006048	GPATCH4	92	92.857	Callithrix_jacchus
ENSSSCG00000006481	GPATCH4	97	64.319	ENSCAFG00000016788	GPATCH4	97	61.321	Canis_familiaris
ENSSSCG00000006481	GPATCH4	88	73.537	ENSCHIG00000021295	GPATCH4	95	76.845	Capra_hircus
ENSSSCG00000006481	GPATCH4	76	75.216	ENSCCAG00000036114	GPATCH4	92	92.857	Cebus_capucinus
ENSSSCG00000006481	GPATCH4	97	73.165	ENSCATG00000042152	GPATCH4	82	89.744	Cercocebus_atys
ENSSSCG00000006481	GPATCH4	99	65.324	ENSCLAG00000002967	-	98	65.090	Chinchilla_lanigera
ENSSSCG00000006481	GPATCH4	100	72.606	ENSCSAG00000002161	GPATCH4	100	71.492	Chlorocebus_sabaeus
ENSSSCG00000006481	GPATCH4	75	75.953	ENSCANG00000030031	GPATCH4	96	75.953	Colobus_angolensis_palliatus
ENSSSCG00000006481	GPATCH4	98	57.834	ENSCGRG00001016898	Gpatch4	75	73.718	Cricetulus_griseus_chok1gshd
ENSSSCG00000006481	GPATCH4	78	63.506	ENSCGRG00000008399	Gpatch4	75	73.718	Cricetulus_griseus_crigri
ENSSSCG00000006481	GPATCH4	100	68.151	ENSDNOG00000034673	GPATCH4	96	68.298	Dasypus_novemcinctus
ENSSSCG00000006481	GPATCH4	87	61.697	ENSETEG00000000659	-	100	58.036	Echinops_telfairi
ENSSSCG00000006481	GPATCH4	100	70.203	ENSEASG00005018284	GPATCH4	100	72.009	Equus_asinus_asinus
ENSSSCG00000006481	GPATCH4	100	70.429	ENSECAG00000011135	GPATCH4	97	78.338	Equus_caballus
ENSSSCG00000006481	GPATCH4	100	61.276	ENSEEUG00000003221	-	100	61.503	Erinaceus_europaeus
ENSSSCG00000006481	GPATCH4	68	78.378	ENSFCAG00000006554	GPATCH4	91	72.810	Felis_catus
ENSSSCG00000006481	GPATCH4	80	36.141	ENSFHEG00000003097	gpatch4	55	46.667	Fundulus_heteroclitus
ENSSSCG00000006481	GPATCH4	50	43.860	ENSGALG00000048365	GPATCH4	54	46.701	Gallus_gallus
ENSSSCG00000006481	GPATCH4	76	76.232	ENSGGOG00000000753	GPATCH4	82	90.598	Gorilla_gorilla
ENSSSCG00000006481	GPATCH4	50	41.964	ENSHCOG00000007016	gpatch4	56	44.560	Hippocampus_comes
ENSSSCG00000006481	GPATCH4	85	65.979	ENSSTOG00000020510	GPATCH4	95	82.812	Ictidomys_tridecemlineatus
ENSSSCG00000006481	GPATCH4	52	41.600	ENSLBEG00000009364	-	59	48.205	Labrus_bergylta
ENSSSCG00000006481	GPATCH4	97	58.219	ENSLAFG00000028327	-	100	56.393	Loxodonta_africana
ENSSSCG00000006481	GPATCH4	77	76.369	ENSMFAG00000030965	GPATCH4	95	80.147	Macaca_fascicularis
ENSSSCG00000006481	GPATCH4	97	73.333	ENSMMUG00000002624	GPATCH4	95	80.882	Macaca_mulatta
ENSSSCG00000006481	GPATCH4	91	71.290	ENSMNEG00000028844	GPATCH4	95	80.147	Macaca_nemestrina
ENSSSCG00000006481	GPATCH4	77	75.862	ENSMLEG00000037909	GPATCH4	82	88.889	Mandrillus_leucophaeus
ENSSSCG00000006481	GPATCH4	50	43.096	ENSMZEG00005017452	gpatch4	55	44.131	Maylandia_zebra
ENSSSCG00000006481	GPATCH4	78	75.931	ENSMICG00000013624	GPATCH4	91	77.713	Microcebus_murinus
ENSSSCG00000006481	GPATCH4	55	60.581	ENSMODG00000016818	-	69	65.816	Monodelphis_domestica
ENSSSCG00000006481	GPATCH4	56	75.918	ENSMUSG00000028069	Gpatch4	82	82.051	Mus_musculus
ENSSSCG00000006481	GPATCH4	91	62.129	MGP_PahariEiJ_G0026595	-	99	76.891	Mus_pahari
ENSSSCG00000006481	GPATCH4	79	64.205	MGP_SPRETEiJ_G0026093	Gpatch4	82	82.564	Mus_spretus
ENSSSCG00000006481	GPATCH4	94	62.768	ENSMPUG00000004136	-	97	62.440	Mustela_putorius_furo
ENSSSCG00000006481	GPATCH4	100	68.161	ENSMLUG00000009571	GPATCH4	100	69.955	Myotis_lucifugus
ENSSSCG00000006481	GPATCH4	76	75.652	ENSNLEG00000027678	GPATCH4	91	75.802	Nomascus_leucogenys
ENSSSCG00000006481	GPATCH4	54	53.617	ENSMEUG00000006861	-	71	59.585	Notamacropus_eugenii
ENSSSCG00000006481	GPATCH4	98	65.023	ENSOPRG00000000586	GPATCH4	98	65.023	Ochotona_princeps
ENSSSCG00000006481	GPATCH4	75	68.182	ENSOCUG00000025781	-	98	61.485	Oryctolagus_cuniculus
ENSSSCG00000006481	GPATCH4	50	36.078	ENSORLG00015019725	gpatch4	58	43.750	Oryzias_latipes_hsok
ENSSSCG00000006481	GPATCH4	94	62.530	ENSOGAG00000006698	-	96	66.348	Otolemur_garnettii
ENSSSCG00000006481	GPATCH4	88	74.555	ENSOARG00000006123	GPATCH4	95	77.608	Ovis_aries
ENSSSCG00000006481	GPATCH4	81	75.207	ENSPPAG00000028364	-	82	90.598	Pan_paniscus
ENSSSCG00000006481	GPATCH4	68	77.703	ENSPPRG00000002106	GPATCH4	91	72.205	Panthera_pardus
ENSSSCG00000006481	GPATCH4	69	78.405	ENSPTIG00000006717	GPATCH4	79	92.793	Panthera_tigris_altaica
ENSSSCG00000006481	GPATCH4	81	75.207	ENSPTRG00000001464	GPATCH4	82	90.598	Pan_troglodytes
ENSSSCG00000006481	GPATCH4	77	76.437	ENSPANG00000018543	GPATCH4	82	90.598	Papio_anubis
ENSSSCG00000006481	GPATCH4	51	41.322	ENSPFOG00000011835	gpatch4	55	42.791	Poecilia_formosa
ENSSSCG00000006481	GPATCH4	51	40.664	ENSPLAG00000019504	gpatch4	56	42.326	Poecilia_latipinna
ENSSSCG00000006481	GPATCH4	51	41.322	ENSPMEG00000001375	gpatch4	56	42.791	Poecilia_mexicana
ENSSSCG00000006481	GPATCH4	53	39.286	ENSPREG00000017029	gpatch4	58	42.791	Poecilia_reticulata
ENSSSCG00000006481	GPATCH4	97	72.311	ENSPPYG00000000711	-	97	72.082	Pongo_abelii
ENSSSCG00000006481	GPATCH4	99	57.243	ENSPVAG00000007505	-	98	58.353	Pteropus_vampyrus
ENSSSCG00000006481	GPATCH4	91	64.461	ENSRNOG00000018969	Gpatch4	95	62.899	Rattus_norvegicus
ENSSSCG00000006481	GPATCH4	68	82.492	ENSRBIG00000005742	GPATCH4	95	82.492	Rhinopithecus_bieti
ENSSSCG00000006481	GPATCH4	100	73.051	ENSRROG00000044157	GPATCH4	98	75.652	Rhinopithecus_roxellana
ENSSSCG00000006481	GPATCH4	100	70.575	ENSSBOG00000024840	GPATCH4	100	71.903	Saimiri_boliviensis_boliviensis
ENSSSCG00000006481	GPATCH4	54	59.072	ENSSHAG00000015436	-	95	57.303	Sarcophilus_harrisii
ENSSSCG00000006481	GPATCH4	75	51.976	ENSSARG00000008606	-	100	50.122	Sorex_araneus
ENSSSCG00000006481	GPATCH4	60	44.689	ENSSPUG00000002674	GPATCH4	66	53.807	Sphenodon_punctatus
ENSSSCG00000006481	GPATCH4	98	72.430	ENSTTRG00000001113	GPATCH4	98	74.533	Tursiops_truncatus
ENSSSCG00000006481	GPATCH4	97	66.129	ENSUAMG00000013407	GPATCH4	98	65.826	Ursus_americanus
ENSSSCG00000006481	GPATCH4	97	65.899	ENSUMAG00000017797	GPATCH4	98	65.596	Ursus_maritimus
ENSSSCG00000006481	GPATCH4	98	57.987	ENSVVUG00000006004	-	88	83.193	Vulpes_vulpes
ENSSSCG00000006481	GPATCH4	51	43.038	ENSXCOG00000003911	gpatch4	56	44.076	Xiphophorus_couchianus
ENSSSCG00000006481	GPATCH4	51	41.079	ENSXMAG00000024520	gpatch4	56	43.192	Xiphophorus_maculatus