EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006645 (Gene tree)
Gene ID: 100157920
Gene Symbol: SETDB1
Alias: ESET|KG1T|KIAA0067|KMT1E|TDRD21
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 36619 bases
Position: chr4:98256868-98293486
Accession: 100157920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000056621	MBD	PF01429.19	2.2e-12	1	1
ENSSSCP00000035284	MBD	PF01429.19	2.2e-12	1	1
ENSSSCP00000055025	MBD	PF01429.19	2.5e-12	1	1
ENSSSCP00000007086	MBD	PF01429.19	2.6e-12	1	1
ENSSSCP00000036429	MBD	PF01429.19	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059337	SETDB1-202	8307	-	ENSSSCP00000036429	1239 (aa)	-	A0A286ZY41
ENSSSCT00000048341	SETDB1-205	4278	-	ENSSSCP00000056621	1139 (aa)	-	A0A287BKD2
ENSSSCT00000007281	SETDB1-201	8466	XM_005663486	ENSSSCP00000007086	1292 (aa)	XP_005663543	F1SS95
ENSSSCT00000052187	SETDB1-204	4430	XM_013997179	ENSSSCP00000035284	1154 (aa)	XP_013852633	A0A286ZV06
ENSSSCT00000064394	SETDB1-203	4648	-	ENSSSCP00000055025	1238 (aa)	-	A0A287BEQ3

Gene Model

Click here to download ENSSSCG00000006645's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00310	Lysine degradation	KEGG
ssc04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006645	SETDB1	100	95.212	ENSG00000143379	SETDB1	100	96.319	Homo_sapiens
ENSSSCG00000006645	SETDB1	92	62.857	ENSAPOG00000016228	setdb1b	98	68.280	Acanthochromis_polyacanthus
ENSSSCG00000006645	SETDB1	100	94.829	ENSAMEG00000001160	SETDB1	100	94.611	Ailuropoda_melanoleuca
ENSSSCG00000006645	SETDB1	92	70.109	ENSACIG00000007359	setdb1b	98	70.109	Amphilophus_citrinellus
ENSSSCG00000006645	SETDB1	89	67.010	ENSAOCG00000005586	setdb1b	99	67.010	Amphiprion_ocellaris
ENSSSCG00000006645	SETDB1	54	67.686	ENSAPEG00000007774	setdb1b	99	67.010	Amphiprion_percula
ENSSSCG00000006645	SETDB1	92	63.810	ENSATEG00000023520	setdb1b	98	68.817	Anabas_testudineus
ENSSSCG00000006645	SETDB1	100	77.502	ENSAPLG00000013908	SETDB1	99	76.344	Anas_platyrhynchos
ENSSSCG00000006645	SETDB1	100	95.534	ENSANAG00000001819	SETDB1	100	95.135	Aotus_nancymaae
ENSSSCG00000006645	SETDB1	88	69.730	ENSACLG00000020489	setdb1b	97	70.270	Astatotilapia_calliptera
ENSSSCG00000006645	SETDB1	57	66.165	ENSAMXG00000010030	setdb1a	68	66.165	Astyanax_mexicanus
ENSSSCG00000006645	SETDB1	91	59.197	ENSAMXG00000016168	setdb1b	97	74.857	Astyanax_mexicanus
ENSSSCG00000006645	SETDB1	100	96.752	ENSBTAG00000000098	SETDB1	100	96.594	Bos_taurus
ENSSSCG00000006645	SETDB1	100	95.022	ENSCJAG00000006972	SETDB1	100	94.684	Callithrix_jacchus
ENSSSCG00000006645	SETDB1	100	94.900	ENSCAFG00000023501	SETDB1	100	94.977	Canis_familiaris
ENSSSCG00000006645	SETDB1	100	94.977	ENSCAFG00020013596	SETDB1	100	95.054	Canis_lupus_dingo
ENSSSCG00000006645	SETDB1	100	96.400	ENSCHIG00000010698	SETDB1	100	96.362	Capra_hircus
ENSSSCG00000006645	SETDB1	84	93.966	ENSTSYG00000012646	SETDB1	100	93.582	Carlito_syrichta
ENSSSCG00000006645	SETDB1	89	91.935	ENSCAPG00000013619	SETDB1	97	90.873	Cavia_aperea
ENSSSCG00000006645	SETDB1	100	94.208	ENSCPOG00000001632	SETDB1	100	94.131	Cavia_porcellus
ENSSSCG00000006645	SETDB1	100	94.934	ENSCCAG00000024882	SETDB1	100	94.684	Cebus_capucinus
ENSSSCG00000006645	SETDB1	100	92.476	ENSCATG00000044888	SETDB1	100	91.512	Cercocebus_atys
ENSSSCG00000006645	SETDB1	100	93.764	ENSCLAG00000000242	SETDB1	100	94.303	Chinchilla_lanigera
ENSSSCG00000006645	SETDB1	100	95.271	ENSCSAG00000018034	SETDB1	100	95.009	Chlorocebus_sabaeus
ENSSSCG00000006645	SETDB1	100	85.294	ENSCHOG00000004013	SETDB1	100	84.985	Choloepus_hoffmanni
ENSSSCG00000006645	SETDB1	100	79.553	ENSCPBG00000008716	SETDB1	99	78.401	Chrysemys_picta_bellii
ENSSSCG00000006645	SETDB1	95	96.189	ENSCANG00000036388	SETDB1	100	96.189	Colobus_angolensis_palliatus
ENSSSCG00000006645	SETDB1	100	92.186	ENSCGRG00001010822	Setdb1	100	91.718	Cricetulus_griseus_chok1gshd
ENSSSCG00000006645	SETDB1	100	92.186	ENSCGRG00000005953	Setdb1	100	91.409	Cricetulus_griseus_crigri
ENSSSCG00000006645	SETDB1	90	63.415	ENSCSEG00000002988	setdb1b	98	69.189	Cynoglossus_semilaevis
ENSSSCG00000006645	SETDB1	90	69.110	ENSCVAG00000008877	setdb1b	98	69.110	Cyprinodon_variegatus
ENSSSCG00000006645	SETDB1	96	59.823	ENSDARG00000099021	setdb1b	92	66.314	Danio_rerio
ENSSSCG00000006645	SETDB1	100	95.175	ENSDNOG00000007754	SETDB1	100	95.066	Dasypus_novemcinctus
ENSSSCG00000006645	SETDB1	100	91.744	ENSDORG00000006830	Setdb1	100	91.821	Dipodomys_ordii
ENSSSCG00000006645	SETDB1	80	47.041	ENSEBUG00000005735	setdb1b	95	47.219	Eptatretus_burgeri
ENSSSCG00000006645	SETDB1	100	95.926	ENSEASG00005002061	SETDB1	100	95.926	Equus_asinus_asinus
ENSSSCG00000006645	SETDB1	100	95.926	ENSECAG00000023954	SETDB1	100	95.926	Equus_caballus
ENSSSCG00000006645	SETDB1	83	95.378	ENSEEUG00000015825	SETDB1	83	95.378	Erinaceus_europaeus
ENSSSCG00000006645	SETDB1	88	76.923	ENSELUG00000013948	setdb1b	97	76.923	Esox_lucius
ENSSSCG00000006645	SETDB1	73	69.149	ENSELUG00000006204	-	76	69.149	Esox_lucius
ENSSSCG00000006645	SETDB1	100	93.117	ENSFCAG00000009655	SETDB1	100	93.349	Felis_catus
ENSSSCG00000006645	SETDB1	100	94.367	ENSFDAG00000021515	SETDB1	100	94.213	Fukomys_damarensis
ENSSSCG00000006645	SETDB1	90	67.368	ENSFHEG00000022195	setdb1b	98	68.421	Fundulus_heteroclitus
ENSSSCG00000006645	SETDB1	87	78.235	ENSGMOG00000005993	setdb1b	93	78.235	Gadus_morhua
ENSSSCG00000006645	SETDB1	100	76.557	ENSGALG00000024051	SETDB1	90	74.633	Gallus_gallus
ENSSSCG00000006645	SETDB1	87	60.667	ENSGAFG00000012805	setdb1b	99	61.333	Gambusia_affinis
ENSSSCG00000006645	SETDB1	87	72.674	ENSGACG00000011675	setdb1b	93	73.837	Gasterosteus_aculeatus
ENSSSCG00000006645	SETDB1	100	79.897	ENSGAGG00000005348	SETDB1	99	78.709	Gopherus_agassizii
ENSSSCG00000006645	SETDB1	100	95.367	ENSGGOG00000016308	SETDB1	100	95.212	Gorilla_gorilla
ENSSSCG00000006645	SETDB1	88	69.730	ENSHBUG00000004618	setdb1b	97	70.270	Haplochromis_burtoni
ENSSSCG00000006645	SETDB1	100	94.054	ENSHGLG00000011098	SETDB1	100	93.900	Heterocephalus_glaber_female
ENSSSCG00000006645	SETDB1	100	93.127	ENSHGLG00100009789	SETDB1	100	92.973	Heterocephalus_glaber_male
ENSSSCG00000006645	SETDB1	88	68.649	ENSHCOG00000014567	setdb1b	97	69.189	Hippocampus_comes
ENSSSCG00000006645	SETDB1	68	65.986	ENSIPUG00000007923	setdb1a	72	67.606	Ictalurus_punctatus
ENSSSCG00000006645	SETDB1	87	73.563	ENSIPUG00000004536	setdb1	97	72.067	Ictalurus_punctatus
ENSSSCG00000006645	SETDB1	100	93.318	ENSSTOG00000006770	SETDB1	100	93.546	Ictidomys_tridecemlineatus
ENSSSCG00000006645	SETDB1	89	67.368	ENSKMAG00000001197	setdb1b	99	67.895	Kryptolebias_marmoratus
ENSSSCG00000006645	SETDB1	90	67.027	ENSLBEG00000025862	setdb1b	98	67.568	Labrus_bergylta
ENSSSCG00000006645	SETDB1	100	69.949	ENSLACG00000011159	SETDB1	99	69.354	Latimeria_chalumnae
ENSSSCG00000006645	SETDB1	100	93.282	ENSLAFG00000004006	SETDB1	100	93.130	Loxodonta_africana
ENSSSCG00000006645	SETDB1	100	95.290	ENSMFAG00000042328	SETDB1	100	94.981	Macaca_fascicularis
ENSSSCG00000006645	SETDB1	100	95.367	ENSMMUG00000023235	SETDB1	100	95.058	Macaca_mulatta
ENSSSCG00000006645	SETDB1	100	95.212	ENSMNEG00000017223	SETDB1	100	94.903	Macaca_nemestrina
ENSSSCG00000006645	SETDB1	100	95.290	ENSMLEG00000033050	SETDB1	100	94.981	Mandrillus_leucophaeus
ENSSSCG00000006645	SETDB1	90	68.889	ENSMAMG00000015176	setdb1b	85	69.444	Mastacembelus_armatus
ENSSSCG00000006645	SETDB1	88	69.730	ENSMZEG00005016099	setdb1b	97	70.270	Maylandia_zebra
ENSSSCG00000006645	SETDB1	91	70.904	ENSMGAG00000001018	SETDB1	86	86.923	Meleagris_gallopavo
ENSSSCG00000006645	SETDB1	92	92.660	ENSMAUG00000021391	Setdb1	100	92.469	Mesocricetus_auratus
ENSSSCG00000006645	SETDB1	100	95.143	ENSMICG00000000425	SETDB1	100	95.374	Microcebus_murinus
ENSSSCG00000006645	SETDB1	100	91.718	ENSMOCG00000017407	Setdb1	100	91.308	Microtus_ochrogaster
ENSSSCG00000006645	SETDB1	90	64.706	ENSMMOG00000016162	setdb1b	98	69.189	Mola_mola
ENSSSCG00000006645	SETDB1	99	87.850	ENSMODG00000018821	SETDB1	90	87.617	Monodelphis_domestica
ENSSSCG00000006645	SETDB1	87	75.460	ENSMALG00000007801	setdb1b	97	75.460	Monopterus_albus
ENSSSCG00000006645	SETDB1	100	90.493	MGP_CAROLIEiJ_G0025342	Setdb1	100	90.229	Mus_caroli
ENSSSCG00000006645	SETDB1	98	92.848	ENSMUSG00000015697	Setdb1	100	89.642	Mus_musculus
ENSSSCG00000006645	SETDB1	100	89.985	ENSMPUG00000004298	SETDB1	100	90.596	Mustela_putorius_furo
ENSSSCG00000006645	SETDB1	100	92.500	ENSMLUG00000010486	SETDB1	100	91.818	Myotis_lucifugus
ENSSSCG00000006645	SETDB1	100	91.633	ENSNGAG00000020151	Setdb1	100	91.554	Nannospalax_galili
ENSSSCG00000006645	SETDB1	88	70.270	ENSNBRG00000003147	setdb1b	98	70.811	Neolamprologus_brichardi
ENSSSCG00000006645	SETDB1	100	91.845	ENSNLEG00000009996	SETDB1	100	91.616	Nomascus_leucogenys
ENSSSCG00000006645	SETDB1	100	80.543	ENSMEUG00000000555	-	100	79.167	Notamacropus_eugenii
ENSSSCG00000006645	SETDB1	92	88.142	ENSMEUG00000006544	-	87	89.204	Notamacropus_eugenii
ENSSSCG00000006645	SETDB1	99	91.558	ENSOPRG00000015349	SETDB1	100	92.442	Ochotona_princeps
ENSSSCG00000006645	SETDB1	100	93.977	ENSODEG00000012471	SETDB1	100	94.054	Octodon_degus
ENSSSCG00000006645	SETDB1	88	69.730	ENSONIG00000006454	setdb1b	98	70.270	Oreochromis_niloticus
ENSSSCG00000006645	SETDB1	100	93.760	ENSOCUG00000003642	SETDB1	100	93.606	Oryctolagus_cuniculus
ENSSSCG00000006645	SETDB1	96	65.842	ENSORLG00000010602	setdb1b	99	68.041	Oryzias_latipes
ENSSSCG00000006645	SETDB1	62	81.402	ENSORLG00020008638	setdb1b	96	64.319	Oryzias_latipes_hni
ENSSSCG00000006645	SETDB1	96	64.251	ENSORLG00015014543	setdb1b	99	66.332	Oryzias_latipes_hsok
ENSSSCG00000006645	SETDB1	96	66.169	ENSOMEG00000009457	setdb1b	99	69.271	Oryzias_melastigma
ENSSSCG00000006645	SETDB1	100	91.506	ENSOGAG00000010320	SETDB1	100	88.426	Otolemur_garnettii
ENSSSCG00000006645	SETDB1	100	96.400	ENSOARG00000020880	SETDB1	100	95.991	Ovis_aries
ENSSSCG00000006645	SETDB1	100	95.135	ENSPPAG00000041015	SETDB1	100	95.058	Pan_paniscus
ENSSSCG00000006645	SETDB1	100	94.896	ENSPPRG00000005462	SETDB1	100	94.818	Panthera_pardus
ENSSSCG00000006645	SETDB1	100	94.045	ENSPTIG00000014233	SETDB1	100	94.122	Panthera_tigris_altaica
ENSSSCG00000006645	SETDB1	100	95.135	ENSPTRG00000001267	SETDB1	100	94.981	Pan_troglodytes
ENSSSCG00000006645	SETDB1	100	92.741	ENSPANG00000020214	SETDB1	100	92.664	Papio_anubis
ENSSSCG00000006645	SETDB1	99	58.031	ENSPKIG00000010963	setdb1b	99	56.998	Paramormyrops_kingsleyae
ENSSSCG00000006645	SETDB1	64	80.000	ENSPSIG00000008407	SETDB1	85	80.000	Pelodiscus_sinensis
ENSSSCG00000006645	SETDB1	100	91.930	ENSPEMG00000010553	Setdb1	100	91.957	Peromyscus_maniculatus_bairdii
ENSSSCG00000006645	SETDB1	98	55.911	ENSPMAG00000001573	setdb1b	100	51.708	Petromyzon_marinus
ENSSSCG00000006645	SETDB1	99	59.256	ENSPFOG00000004623	-	98	57.132	Poecilia_formosa
ENSSSCG00000006645	SETDB1	99	56.887	ENSPFOG00000004429	setdb1b	89	79.641	Poecilia_formosa
ENSSSCG00000006645	SETDB1	91	61.333	ENSPLAG00000017117	setdb1b	99	62.667	Poecilia_latipinna
ENSSSCG00000006645	SETDB1	94	68.085	ENSPLAG00000019076	-	99	69.149	Poecilia_latipinna
ENSSSCG00000006645	SETDB1	94	68.085	ENSPMEG00000006468	setdb1b	99	69.149	Poecilia_mexicana
ENSSSCG00000006645	SETDB1	94	68.085	ENSPREG00000017459	setdb1b	99	68.617	Poecilia_reticulata
ENSSSCG00000006645	SETDB1	100	95.184	ENSPPYG00000000887	SETDB1	100	94.903	Pongo_abelii
ENSSSCG00000006645	SETDB1	89	92.029	ENSPCAG00000002527	SETDB1	100	92.029	Procavia_capensis
ENSSSCG00000006645	SETDB1	100	95.212	ENSPCOG00000027869	SETDB1	100	95.058	Propithecus_coquereli
ENSSSCG00000006645	SETDB1	93	91.277	ENSPVAG00000004355	SETDB1	93	91.900	Pteropus_vampyrus
ENSSSCG00000006645	SETDB1	89	70.270	ENSPNYG00000003997	setdb1b	97	70.270	Pundamilia_nyererei
ENSSSCG00000006645	SETDB1	74	63.014	ENSPNAG00000003444	setdb1a	63	63.014	Pygocentrus_nattereri
ENSSSCG00000006645	SETDB1	90	64.319	ENSPNAG00000021617	setdb1b	89	70.492	Pygocentrus_nattereri
ENSSSCG00000006645	SETDB1	100	90.121	ENSRNOG00000021143	Setdb1	100	89.977	Rattus_norvegicus
ENSSSCG00000006645	SETDB1	100	95.290	ENSRBIG00000042359	SETDB1	100	95.058	Rhinopithecus_bieti
ENSSSCG00000006645	SETDB1	100	95.444	ENSRROG00000032628	SETDB1	100	95.212	Rhinopithecus_roxellana
ENSSSCG00000006645	SETDB1	100	94.948	ENSSBOG00000028608	SETDB1	100	94.696	Saimiri_boliviensis_boliviensis
ENSSSCG00000006645	SETDB1	100	86.842	ENSSHAG00000012701	SETDB1	100	86.610	Sarcophilus_harrisii
ENSSSCG00000006645	SETDB1	87	69.849	ENSSFOG00015022183	setdb1	96	76.571	Scleropages_formosus
ENSSSCG00000006645	SETDB1	88	61.468	ENSSMAG00000015398	setdb1b	99	65.672	Scophthalmus_maximus
ENSSSCG00000006645	SETDB1	92	64.929	ENSSDUG00000007513	setdb1b	99	68.750	Seriola_dumerili
ENSSSCG00000006645	SETDB1	92	64.929	ENSSLDG00000015209	setdb1b	99	69.072	Seriola_lalandi_dorsalis
ENSSSCG00000006645	SETDB1	100	77.836	ENSSPUG00000002969	SETDB1	99	76.521	Sphenodon_punctatus
ENSSSCG00000006645	SETDB1	100	74.632	ENSTGUG00000004684	SETDB1	100	72.859	Taeniopygia_guttata
ENSSSCG00000006645	SETDB1	88	66.845	ENSTRUG00000014641	setdb1b	98	66.845	Takifugu_rubripes
ENSSSCG00000006645	SETDB1	99	56.371	ENSTNIG00000008065	setdb1b	98	55.812	Tetraodon_nigroviridis
ENSSSCG00000006645	SETDB1	100	94.672	ENSTBEG00000009306	SETDB1	100	94.518	Tupaia_belangeri
ENSSSCG00000006645	SETDB1	89	95.500	ENSTTRG00000006966	SETDB1	89	94.300	Tursiops_truncatus
ENSSSCG00000006645	SETDB1	100	94.308	ENSUAMG00000026724	SETDB1	100	95.000	Ursus_americanus
ENSSSCG00000006645	SETDB1	100	90.773	ENSUMAG00000003141	SETDB1	100	91.448	Ursus_maritimus
ENSSSCG00000006645	SETDB1	78	97.619	ENSVPAG00000005440	SETDB1	78	97.619	Vicugna_pacos
ENSSSCG00000006645	SETDB1	100	94.822	ENSVVUG00000011637	SETDB1	100	94.900	Vulpes_vulpes
ENSSSCG00000006645	SETDB1	100	71.059	ENSXETG00000008936	setdb1	98	69.683	Xenopus_tropicalis
ENSSSCG00000006645	SETDB1	99	58.154	ENSXCOG00000019497	setdb1b	89	72.881	Xiphophorus_couchianus
ENSSSCG00000006645	SETDB1	90	68.085	ENSXMAG00000016600	setdb1b	98	68.617	Xiphophorus_maculatus