EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000006701 (Gene tree)
Gene ID: 100154153
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 53729 bases
Position: chr4:100264968-100318696
Accession: 100154153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007145	ResIII	PF04851.15	1e-10	1	1
ENSSSCP00000059274	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000007340	CHD1L-202	5060	-	ENSSSCP00000007145	756 (aa)	-	F1SDB8
ENSSSCT00000050787	CHD1L-201	4929	XM_001928518	ENSSSCP00000059274	858 (aa)	XP_001928553	A0A287BSZ4

Gene Model

Click here to download ENSSSCG00000006701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000006701	CHD1L	73	44.056	ENSSSCG00000012649	SMARCA1	55	44.056
ENSSSCG00000006701	CHD1L	60	30.785	ENSSSCG00000003905	RAD54L	66	30.785
ENSSSCG00000006701	CHD1L	73	43.304	ENSSSCG00000009047	SMARCA5	56	43.304
ENSSSCG00000006701	CHD1L	61	36.381	ENSSSCG00000009193	SMARCAD1	62	36.190
ENSSSCG00000006701	CHD1L	60	31.456	ENSSSCG00000006101	-	63	31.456
ENSSSCG00000006701	CHD1L	61	39.889	ENSSSCG00000010486	HELLS	61	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006701	CHD1L	98	90.040	ENSG00000131778	CHD1L	100	87.540	Homo_sapiens
ENSSSCG00000006701	CHD1L	97	62.644	ENSAPOG00000001539	chd1l	99	62.989	Acanthochromis_polyacanthus
ENSSSCG00000006701	CHD1L	98	89.906	ENSAMEG00000017063	CHD1L	99	86.727	Ailuropoda_melanoleuca
ENSSSCG00000006701	CHD1L	95	63.318	ENSACIG00000001164	chd1l	99	62.714	Amphilophus_citrinellus
ENSSSCG00000006701	CHD1L	96	62.457	ENSAOCG00000014510	chd1l	85	62.993	Amphiprion_ocellaris
ENSSSCG00000006701	CHD1L	97	63.712	ENSAPEG00000017573	chd1l	95	64.184	Amphiprion_percula
ENSSSCG00000006701	CHD1L	99	62.616	ENSAPEG00000017450	chd1l	94	64.508	Amphiprion_percula
ENSSSCG00000006701	CHD1L	99	63.026	ENSATEG00000013058	chd1l	95	62.317	Anabas_testudineus
ENSSSCG00000006701	CHD1L	97	71.757	ENSAPLG00000009976	CHD1L	95	72.385	Anas_platyrhynchos
ENSSSCG00000006701	CHD1L	98	66.181	ENSACAG00000017686	CHD1L	98	66.181	Anolis_carolinensis
ENSSSCG00000006701	CHD1L	98	88.919	ENSANAG00000024347	CHD1L	99	87.079	Aotus_nancymaae
ENSSSCG00000006701	CHD1L	98	62.543	ENSACLG00000019304	chd1l	97	62.415	Astatotilapia_calliptera
ENSSSCG00000006701	CHD1L	99	57.240	ENSAMXG00000012367	chd1l	87	57.701	Astyanax_mexicanus
ENSSSCG00000006701	CHD1L	98	91.252	ENSBTAG00000020831	CHD1L	98	88.383	Bos_taurus
ENSSSCG00000006701	CHD1L	98	88.306	ENSCJAG00000002406	CHD1L	99	87.162	Callithrix_jacchus
ENSSSCG00000006701	CHD1L	98	86.040	ENSCAFG00000010944	CHD1L	99	83.559	Canis_familiaris
ENSSSCG00000006701	CHD1L	98	89.233	ENSCAFG00020020121	CHD1L	99	85.268	Canis_lupus_dingo
ENSSSCG00000006701	CHD1L	98	89.906	ENSCHIG00000013871	CHD1L	98	87.130	Capra_hircus
ENSSSCG00000006701	CHD1L	96	87.705	ENSTSYG00000003005	CHD1L	100	87.705	Carlito_syrichta
ENSSSCG00000006701	CHD1L	97	85.656	ENSCPOG00000009000	CHD1L	98	83.390	Cavia_porcellus
ENSSSCG00000006701	CHD1L	98	90.629	ENSCCAG00000036079	CHD1L	99	90.432	Cebus_capucinus
ENSSSCG00000006701	CHD1L	98	89.637	ENSCATG00000031044	CHD1L	99	87.950	Cercocebus_atys
ENSSSCG00000006701	CHD1L	97	87.364	ENSCLAG00000000880	CHD1L	99	85.314	Chinchilla_lanigera
ENSSSCG00000006701	CHD1L	98	89.771	ENSCSAG00000018386	CHD1L	99	87.950	Chlorocebus_sabaeus
ENSSSCG00000006701	CHD1L	97	74.727	ENSCPBG00000002600	CHD1L	99	73.349	Chrysemys_picta_bellii
ENSSSCG00000006701	CHD1L	98	87.752	ENSCANG00000020239	CHD1L	99	86.374	Colobus_angolensis_palliatus
ENSSSCG00000006701	CHD1L	97	85.190	ENSCGRG00001021624	Chd1l	98	82.045	Cricetulus_griseus_chok1gshd
ENSSSCG00000006701	CHD1L	92	86.187	ENSCGRG00000007554	Chd1l	99	82.660	Cricetulus_griseus_crigri
ENSSSCG00000006701	CHD1L	98	60.860	ENSCVAG00000002595	chd1l	90	61.072	Cyprinodon_variegatus
ENSSSCG00000006701	CHD1L	98	63.876	ENSDARG00000015471	chd1l	85	63.657	Danio_rerio
ENSSSCG00000006701	CHD1L	98	88.560	ENSDNOG00000019504	CHD1L	99	86.164	Dasypus_novemcinctus
ENSSSCG00000006701	CHD1L	97	82.124	ENSDORG00000013555	Chd1l	98	79.864	Dipodomys_ordii
ENSSSCG00000006701	CHD1L	93	82.028	ENSETEG00000008445	CHD1L	88	82.437	Echinops_telfairi
ENSSSCG00000006701	CHD1L	67	60.811	ENSEBUG00000005791	chd1l	77	76.596	Eptatretus_burgeri
ENSSSCG00000006701	CHD1L	98	90.444	ENSEASG00005007364	CHD1L	99	88.358	Equus_asinus_asinus
ENSSSCG00000006701	CHD1L	98	90.444	ENSECAG00000008915	CHD1L	99	88.358	Equus_caballus
ENSSSCG00000006701	CHD1L	96	53.042	ENSELUG00000016844	chd1l	83	52.860	Esox_lucius
ENSSSCG00000006701	CHD1L	98	90.323	ENSFCAG00000007777	CHD1L	98	87.600	Felis_catus
ENSSSCG00000006701	CHD1L	98	71.351	ENSFALG00000006087	CHD1L	97	70.648	Ficedula_albicollis
ENSSSCG00000006701	CHD1L	92	89.158	ENSFDAG00000012431	CHD1L	99	86.203	Fukomys_damarensis
ENSSSCG00000006701	CHD1L	98	61.213	ENSFHEG00000012420	chd1l	85	62.121	Fundulus_heteroclitus
ENSSSCG00000006701	CHD1L	99	69.977	ENSGALG00000015038	CHD1L	97	70.366	Gallus_gallus
ENSSSCG00000006701	CHD1L	97	62.457	ENSGAFG00000018198	chd1l	97	60.304	Gambusia_affinis
ENSSSCG00000006701	CHD1L	69	66.216	ENSGACG00000014042	chd1l	99	66.216	Gasterosteus_aculeatus
ENSSSCG00000006701	CHD1L	97	75.000	ENSGAGG00000014432	CHD1L	99	73.526	Gopherus_agassizii
ENSSSCG00000006701	CHD1L	98	88.964	ENSGGOG00000001067	CHD1L	99	87.050	Gorilla_gorilla
ENSSSCG00000006701	CHD1L	99	61.685	ENSHBUG00000007464	chd1l	99	61.685	Haplochromis_burtoni
ENSSSCG00000006701	CHD1L	97	86.277	ENSHGLG00000008933	CHD1L	99	83.726	Heterocephalus_glaber_female
ENSSSCG00000006701	CHD1L	96	81.628	ENSHGLG00100007155	CHD1L	100	82.093	Heterocephalus_glaber_male
ENSSSCG00000006701	CHD1L	94	61.483	ENSHCOG00000012787	chd1l	92	61.842	Hippocampus_comes
ENSSSCG00000006701	CHD1L	99	59.322	ENSIPUG00000022617	chd1l	86	59.132	Ictalurus_punctatus
ENSSSCG00000006701	CHD1L	99	76.121	ENSSTOG00000007032	CHD1L	99	76.121	Ictidomys_tridecemlineatus
ENSSSCG00000006701	CHD1L	99	61.798	ENSKMAG00000014358	chd1l	86	62.743	Kryptolebias_marmoratus
ENSSSCG00000006701	CHD1L	98	61.916	ENSLBEG00000023845	chd1l	96	62.515	Labrus_bergylta
ENSSSCG00000006701	CHD1L	96	63.626	ENSLACG00000006262	CHD1L	84	64.079	Latimeria_chalumnae
ENSSSCG00000006701	CHD1L	97	67.509	ENSLOCG00000010574	chd1l	87	67.083	Lepisosteus_oculatus
ENSSSCG00000006701	CHD1L	96	86.147	ENSLAFG00000018136	CHD1L	99	86.284	Loxodonta_africana
ENSSSCG00000006701	CHD1L	97	86.543	ENSMFAG00000043562	CHD1L	100	88.271	Macaca_fascicularis
ENSSSCG00000006701	CHD1L	98	89.367	ENSMMUG00000009024	CHD1L	99	87.725	Macaca_mulatta
ENSSSCG00000006701	CHD1L	98	89.502	ENSMNEG00000039905	CHD1L	99	87.838	Macaca_nemestrina
ENSSSCG00000006701	CHD1L	98	89.906	ENSMLEG00000030900	CHD1L	99	88.176	Mandrillus_leucophaeus
ENSSSCG00000006701	CHD1L	97	60.850	ENSMAMG00000012822	chd1l	99	59.217	Mastacembelus_armatus
ENSSSCG00000006701	CHD1L	98	62.543	ENSMZEG00005020830	chd1l	87	63.048	Maylandia_zebra
ENSSSCG00000006701	CHD1L	96	70.175	ENSMGAG00000014304	CHD1L	98	70.700	Meleagris_gallopavo
ENSSSCG00000006701	CHD1L	50	86.316	ENSMAUG00000004712	-	97	86.316	Mesocricetus_auratus
ENSSSCG00000006701	CHD1L	98	89.771	ENSMICG00000002497	CHD1L	99	87.514	Microcebus_murinus
ENSSSCG00000006701	CHD1L	100	82.517	ENSMOCG00000006305	Chd1l	98	82.864	Microtus_ochrogaster
ENSSSCG00000006701	CHD1L	96	59.139	ENSMMOG00000005964	chd1l	90	59.139	Mola_mola
ENSSSCG00000006701	CHD1L	100	76.794	ENSMODG00000018717	CHD1L	98	77.500	Monodelphis_domestica
ENSSSCG00000006701	CHD1L	98	61.451	ENSMALG00000014675	chd1l	85	62.471	Monopterus_albus
ENSSSCG00000006701	CHD1L	100	82.083	MGP_CAROLIEiJ_G0025401	Chd1l	98	82.520	Mus_caroli
ENSSSCG00000006701	CHD1L	97	83.624	ENSMUSG00000028089	Chd1l	98	81.982	Mus_musculus
ENSSSCG00000006701	CHD1L	100	82.941	MGP_PahariEiJ_G0026845	Chd1l	98	83.504	Mus_pahari
ENSSSCG00000006701	CHD1L	97	84.939	MGP_SPRETEiJ_G0026347	Chd1l	98	82.841	Mus_spretus
ENSSSCG00000006701	CHD1L	98	88.964	ENSMPUG00000000615	CHD1L	97	86.254	Mustela_putorius_furo
ENSSSCG00000006701	CHD1L	98	86.400	ENSMLUG00000007573	CHD1L	97	84.181	Myotis_lucifugus
ENSSSCG00000006701	CHD1L	97	79.909	ENSNGAG00000000908	Chd1l	99	79.795	Nannospalax_galili
ENSSSCG00000006701	CHD1L	96	64.118	ENSNBRG00000006021	chd1l	94	64.118	Neolamprologus_brichardi
ENSSSCG00000006701	CHD1L	98	89.367	ENSNLEG00000000179	CHD1L	99	87.275	Nomascus_leucogenys
ENSSSCG00000006701	CHD1L	92	77.889	ENSOPRG00000006973	CHD1L	99	73.113	Ochotona_princeps
ENSSSCG00000006701	CHD1L	99	79.889	ENSODEG00000002494	CHD1L	99	80.333	Octodon_degus
ENSSSCG00000006701	CHD1L	98	62.429	ENSONIG00000003183	chd1l	88	63.279	Oreochromis_niloticus
ENSSSCG00000006701	CHD1L	88	71.365	ENSOANG00000003068	CHD1L	93	69.560	Ornithorhynchus_anatinus
ENSSSCG00000006701	CHD1L	99	82.763	ENSOCUG00000009336	CHD1L	98	80.311	Oryctolagus_cuniculus
ENSSSCG00000006701	CHD1L	99	59.843	ENSORLG00000003673	chd1l	96	60.068	Oryzias_latipes
ENSSSCG00000006701	CHD1L	98	60.596	ENSORLG00020005123	chd1l	98	62.857	Oryzias_latipes_hni
ENSSSCG00000006701	CHD1L	99	59.663	ENSORLG00015001680	chd1l	98	60.460	Oryzias_latipes_hsok
ENSSSCG00000006701	CHD1L	81	60.682	ENSOMEG00000006109	chd1l	81	62.362	Oryzias_melastigma
ENSSSCG00000006701	CHD1L	99	87.166	ENSOGAG00000008775	CHD1L	99	85.056	Otolemur_garnettii
ENSSSCG00000006701	CHD1L	98	89.637	ENSOARG00000020547	CHD1L	99	87.352	Ovis_aries
ENSSSCG00000006701	CHD1L	98	88.694	ENSPPAG00000039193	CHD1L	100	88.875	Pan_paniscus
ENSSSCG00000006701	CHD1L	98	90.860	ENSPPRG00000010258	CHD1L	98	87.941	Panthera_pardus
ENSSSCG00000006701	CHD1L	98	89.906	ENSPTRG00000001220	CHD1L	99	87.950	Pan_troglodytes
ENSSSCG00000006701	CHD1L	98	89.906	ENSPANG00000009170	CHD1L	99	88.176	Papio_anubis
ENSSSCG00000006701	CHD1L	98	62.156	ENSPKIG00000022166	chd1l	97	60.216	Paramormyrops_kingsleyae
ENSSSCG00000006701	CHD1L	98	73.394	ENSPSIG00000012595	CHD1L	97	73.425	Pelodiscus_sinensis
ENSSSCG00000006701	CHD1L	97	82.013	ENSPEMG00000013528	Chd1l	98	81.644	Peromyscus_maniculatus_bairdii
ENSSSCG00000006701	CHD1L	93	78.114	ENSPCIG00000030409	CHD1L	100	78.114	Phascolarctos_cinereus
ENSSSCG00000006701	CHD1L	98	61.731	ENSPFOG00000015948	chd1l	86	62.002	Poecilia_formosa
ENSSSCG00000006701	CHD1L	98	61.721	ENSPLAG00000015145	chd1l	97	61.600	Poecilia_latipinna
ENSSSCG00000006701	CHD1L	98	61.136	ENSPMEG00000008720	chd1l	92	61.705	Poecilia_mexicana
ENSSSCG00000006701	CHD1L	96	60.995	ENSPREG00000017885	chd1l	97	60.532	Poecilia_reticulata
ENSSSCG00000006701	CHD1L	98	90.444	ENSPPYG00000000946	CHD1L	98	88.162	Pongo_abelii
ENSSSCG00000006701	CHD1L	98	78.735	ENSPCAG00000005959	CHD1L	97	74.282	Procavia_capensis
ENSSSCG00000006701	CHD1L	95	80.874	ENSPVAG00000006084	CHD1L	99	81.065	Pteropus_vampyrus
ENSSSCG00000006701	CHD1L	99	61.685	ENSPNYG00000013001	chd1l	96	62.745	Pundamilia_nyererei
ENSSSCG00000006701	CHD1L	98	62.857	ENSPNAG00000011881	chd1l	85	63.429	Pygocentrus_nattereri
ENSSSCG00000006701	CHD1L	97	84.430	ENSRNOG00000017669	Chd1l	98	83.427	Rattus_norvegicus
ENSSSCG00000006701	CHD1L	98	87.618	ENSRBIG00000041272	CHD1L	99	86.261	Rhinopithecus_bieti
ENSSSCG00000006701	CHD1L	98	87.483	ENSRROG00000041354	CHD1L	97	86.127	Rhinopithecus_roxellana
ENSSSCG00000006701	CHD1L	97	76.184	ENSSHAG00000017395	CHD1L	98	73.918	Sarcophilus_harrisii
ENSSSCG00000006701	CHD1L	98	64.343	ENSSFOG00015003649	chd1l	98	62.514	Scleropages_formosus
ENSSSCG00000006701	CHD1L	98	58.969	ENSSMAG00000019377	chd1l	97	58.484	Scophthalmus_maximus
ENSSSCG00000006701	CHD1L	96	62.676	ENSSDUG00000019831	chd1l	95	62.676	Seriola_dumerili
ENSSSCG00000006701	CHD1L	96	62.515	ENSSLDG00000012714	chd1l	96	62.515	Seriola_lalandi_dorsalis
ENSSSCG00000006701	CHD1L	99	70.960	ENSSPUG00000016865	CHD1L	98	71.968	Sphenodon_punctatus
ENSSSCG00000006701	CHD1L	97	62.184	ENSSPAG00000017653	chd1l	91	62.874	Stegastes_partitus
ENSSSCG00000006701	CHD1L	96	72.802	ENSTGUG00000013392	-	99	72.526	Taeniopygia_guttata
ENSSSCG00000006701	CHD1L	95	58.451	ENSTNIG00000004902	chd1l	99	57.864	Tetraodon_nigroviridis
ENSSSCG00000006701	CHD1L	95	85.229	ENSTTRG00000011711	CHD1L	99	85.159	Tursiops_truncatus
ENSSSCG00000006701	CHD1L	98	89.189	ENSUAMG00000021991	CHD1L	98	86.659	Ursus_americanus
ENSSSCG00000006701	CHD1L	98	89.054	ENSUMAG00000009733	CHD1L	99	86.559	Ursus_maritimus
ENSSSCG00000006701	CHD1L	98	89.502	ENSVVUG00000007316	CHD1L	94	86.389	Vulpes_vulpes
ENSSSCG00000006701	CHD1L	98	63.011	ENSXCOG00000008336	chd1l	85	63.820	Xiphophorus_couchianus
ENSSSCG00000006701	CHD1L	98	61.975	ENSXMAG00000015898	chd1l	96	58.294	Xiphophorus_maculatus