EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006733 (Gene tree)
Gene ID: 100156166
Gene Symbol: TTF2
Alias: HuF2|ZGRF6
Full Name: transcription termination factor 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 55319 bases
Position: chr4:103622062-103677380
Accession: 100156166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000020113	ResIII	PF04851.15	6.8e-09	1	1
ENSSSCP00000007181	ResIII	PF04851.15	7.1e-09	1	1
ENSSSCP00000019191	ResIII	PF04851.15	7.6e-09	1	1
ENSSSCP00000020113	DEAD	PF00270.29	5.2e-06	1	1
ENSSSCP00000007181	DEAD	PF00270.29	5.2e-06	1	1
ENSSSCP00000019191	DEAD	PF00270.29	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031433	TTF2-201	5595	-	ENSSSCP00000020113	1111 (aa)	-	I3L7V5
ENSSSCT00000007376	TTF2-203	4121	-	ENSSSCP00000007181	1119 (aa)	-	F1SAY2
ENSSSCT00000023786	TTF2-202	8465	XM_001929357	ENSSSCP00000019191	1166 (aa)	XP_001929392	I3L592

Gene Model

Click here to download ENSSSCG00000006733's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04918	Thyroid hormone synthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006733	TTF2	100	75.257	ENSG00000116830	TTF2	100	91.608	Homo_sapiens
ENSSSCG00000006733	TTF2	68	64.791	ENSAPLG00000010324	-	70	64.791	Anas_platyrhynchos
ENSSSCG00000006733	TTF2	100	75.771	ENSANAG00000020654	TTF2	100	75.771	Aotus_nancymaae
ENSSSCG00000006733	TTF2	100	80.377	ENSBTAG00000015392	TTF2	100	80.377	Bos_taurus
ENSSSCG00000006733	TTF2	100	79.036	ENSCHIG00000020785	TTF2	98	78.783	Capra_hircus
ENSSSCG00000006733	TTF2	100	75.342	ENSCCAG00000032675	TTF2	100	75.342	Cebus_capucinus
ENSSSCG00000006733	TTF2	67	38.490	ENSCSAVG00000002857	-	100	38.119	Ciona_savignyi
ENSSSCG00000006733	TTF2	100	75.791	ENSCANG00000032079	TTF2	100	75.791	Colobus_angolensis_palliatus
ENSSSCG00000006733	TTF2	100	63.219	ENSDORG00000013781	Ttf2	100	63.303	Dipodomys_ordii
ENSSSCG00000006733	TTF2	65	38.570	FBgn0002542	lds	70	38.825	Drosophila_melanogaster
ENSSSCG00000006733	TTF2	100	79.195	ENSECAG00000012474	TTF2	100	82.402	Equus_caballus
ENSSSCG00000006733	TTF2	100	71.160	ENSFCAG00000001981	TTF2	100	71.672	Felis_catus
ENSSSCG00000006733	TTF2	86	47.917	ENSGALG00000015249	-	99	47.225	Gallus_gallus
ENSSSCG00000006733	TTF2	99	47.396	ENSGAFG00000004358	TTF2	99	47.656	Gambusia_affinis
ENSSSCG00000006733	TTF2	100	75.171	ENSGGOG00000015790	TTF2	100	75.171	Gorilla_gorilla
ENSSSCG00000006733	TTF2	100	70.367	ENSJJAG00000015225	Ttf2	100	70.377	Jaculus_jaculus
ENSSSCG00000006733	TTF2	100	74.251	ENSMNEG00000042285	TTF2	100	74.251	Macaca_nemestrina
ENSSSCG00000006733	TTF2	100	75.791	ENSMLEG00000041549	TTF2	100	75.791	Mandrillus_leucophaeus
ENSSSCG00000006733	TTF2	100	52.733	ENSMGAG00000014354	TTF2	100	52.733	Meleagris_gallopavo
ENSSSCG00000006733	TTF2	100	65.558	ENSMOCG00000008415	Ttf2	99	66.638	Microtus_ochrogaster
ENSSSCG00000006733	TTF2	100	60.338	ENSMODG00000005145	TTF2	98	60.084	Monodelphis_domestica
ENSSSCG00000006733	TTF2	75	58.730	ENSMALG00000017262	TTF2	82	58.707	Monopterus_albus
ENSSSCG00000006733	TTF2	100	69.001	MGP_CAROLIEiJ_G0025427	Ttf2	100	69.001	Mus_caroli
ENSSSCG00000006733	TTF2	100	68.915	ENSMUSG00000033222	Ttf2	100	68.862	Mus_musculus
ENSSSCG00000006733	TTF2	100	68.718	MGP_PahariEiJ_G0026871	Ttf2	100	68.921	Mus_pahari
ENSSSCG00000006733	TTF2	100	68.915	MGP_SPRETEiJ_G0026377	Ttf2	100	68.862	Mus_spretus
ENSSSCG00000006733	TTF2	100	79.231	ENSMLUG00000013908	TTF2	100	79.231	Myotis_lucifugus
ENSSSCG00000006733	TTF2	100	73.271	ENSNGAG00000018882	Ttf2	100	73.202	Nannospalax_galili
ENSSSCG00000006733	TTF2	73	56.797	ENSNBRG00000011914	TTF2	75	55.398	Neolamprologus_brichardi
ENSSSCG00000006733	TTF2	100	76.113	ENSNLEG00000005209	TTF2	100	76.113	Nomascus_leucogenys
ENSSSCG00000006733	TTF2	100	73.567	ENSOCUG00000000613	TTF2	100	73.567	Oryctolagus_cuniculus
ENSSSCG00000006733	TTF2	100	72.284	ENSOGAG00000009039	TTF2	100	72.284	Otolemur_garnettii
ENSSSCG00000006733	TTF2	100	79.113	ENSOARG00000020266	TTF2	100	79.113	Ovis_aries
ENSSSCG00000006733	TTF2	100	75.257	ENSPPAG00000027542	TTF2	100	75.257	Pan_paniscus
ENSSSCG00000006733	TTF2	100	75.171	ENSPTRG00000001162	TTF2	100	75.171	Pan_troglodytes
ENSSSCG00000006733	TTF2	68	64.086	ENSPSIG00000005266	TTF2	99	64.086	Pelodiscus_sinensis
ENSSSCG00000006733	TTF2	86	57.283	ENSPCIG00000003483	TTF2	90	57.101	Phascolarctos_cinereus
ENSSSCG00000006733	TTF2	100	72.688	ENSPPYG00000000976	TTF2	100	72.688	Pongo_abelii
ENSSSCG00000006733	TTF2	100	76.007	ENSPCOG00000000551	TTF2	100	76.007	Propithecus_coquereli
ENSSSCG00000006733	TTF2	100	75.901	ENSPVAG00000014881	TTF2	100	75.901	Pteropus_vampyrus
ENSSSCG00000006733	TTF2	100	74.894	ENSRBIG00000042651	TTF2	100	74.894	Rhinopithecus_bieti
ENSSSCG00000006733	TTF2	100	75.428	ENSRROG00000013287	TTF2	100	75.428	Rhinopithecus_roxellana
ENSSSCG00000006733	TTF2	100	73.545	ENSSBOG00000022555	TTF2	100	73.887	Saimiri_boliviensis_boliviensis
ENSSSCG00000006733	TTF2	100	59.237	ENSSHAG00000018195	TTF2	100	59.153	Sarcophilus_harrisii
ENSSSCG00000006733	TTF2	82	58.427	ENSSMAG00000007532	TTF2	100	48.664	Scophthalmus_maximus
ENSSSCG00000006733	TTF2	99	47.714	ENSSDUG00000013617	TTF2	99	48.322	Seriola_dumerili
ENSSSCG00000006733	TTF2	100	62.222	ENSSARG00000007562	TTF2	100	62.906	Sorex_araneus
ENSSSCG00000006733	TTF2	92	44.334	ENSTRUG00000015592	-	73	52.022	Takifugu_rubripes
ENSSSCG00000006733	TTF2	78	57.534	ENSTNIG00000015679	-	85	56.272	Tetraodon_nigroviridis
ENSSSCG00000006733	TTF2	100	78.063	ENSTTRG00000012884	TTF2	100	78.063	Tursiops_truncatus
ENSSSCG00000006733	TTF2	91	71.764	ENSVPAG00000008276	TTF2	97	71.764	Vicugna_pacos
ENSSSCG00000006733	TTF2	78	45.714	ENSXETG00000022003	-	100	45.475	Xenopus_tropicalis