EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000006752 (Gene tree)
Gene ID
100739316
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
41406 bases
Position
chr4:105804587-105845992
Accession
100739316
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000036468CSDPF00313.221.7e-8515
ENSSSCP00000036468CSDPF00313.221.7e-8525
ENSSSCP00000036468CSDPF00313.221.7e-8535
ENSSSCP00000036468CSDPF00313.221.7e-8545
ENSSSCP00000036468CSDPF00313.221.7e-8555
ENSSSCP00000050736CSDPF00313.226.4e-8515
ENSSSCP00000050736CSDPF00313.226.4e-8525
ENSSSCP00000050736CSDPF00313.226.4e-8535
ENSSSCP00000050736CSDPF00313.226.4e-8545
ENSSSCP00000050736CSDPF00313.226.4e-8555
ENSSSCP00000057604CSDPF00313.226.4e-8515
ENSSSCP00000057604CSDPF00313.226.4e-8525
ENSSSCP00000057604CSDPF00313.226.4e-8535
ENSSSCP00000057604CSDPF00313.226.4e-8545
ENSSSCP00000057604CSDPF00313.226.4e-8555
ENSSSCP00000053136CSDPF00313.222.9e-7514
ENSSSCP00000053136CSDPF00313.222.9e-7524
ENSSSCP00000053136CSDPF00313.222.9e-7534
ENSSSCP00000053136CSDPF00313.222.9e-7544
ENSSSCP00000007202CSDPF00313.223.9e-7514
ENSSSCP00000007202CSDPF00313.223.9e-7524
ENSSSCP00000007202CSDPF00313.223.9e-7534
ENSSSCP00000007202CSDPF00313.223.9e-7544
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000056866CSDE1-2024860XM_005655417ENSSSCP00000036468767 (aa)XP_005655474A0A286ZYD8
ENSSSCT00000064093CSDE1-2014281XM_003481484ENSSSCP00000050736844 (aa)XP_003481532A0A287BM79
ENSSSCT00000044302CSDE1-2034471XM_021090004ENSSSCP00000057604844 (aa)XP_020945663A0A287BM79
ENSSSCT00000048448CSDE1-2053948-ENSSSCP00000053136714 (aa)-A0A287B9X6
ENSSSCT00000007397CSDE1-2043989-ENSSSCP00000007202746 (aa)-F1SBS1
Gene Model
Click here to download ENSSSCG00000006752's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006752's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000006752CSDE110099.348ENSG00000009307CSDE1100100.000Homo_sapiens
ENSSSCG00000006752CSDE110078.052ENSAPOG00000015538csde110078.052Acanthochromis_polyacanthus
ENSSSCG00000006752CSDE110098.305ENSAMEG00000017129CSDE110094.320Ailuropoda_melanoleuca
ENSSSCG00000006752CSDE19477.297ENSACIG00000015175csde110077.297Amphilophus_citrinellus
ENSSSCG00000006752CSDE110078.182ENSAOCG00000011510csde110078.182Amphiprion_ocellaris
ENSSSCG00000006752CSDE110078.182ENSAPEG00000007194csde110078.182Amphiprion_percula
ENSSSCG00000006752CSDE110077.792ENSATEG00000003864csde110077.792Anabas_testudineus
ENSSSCG00000006752CSDE110091.917ENSAPLG00000008797CSDE110091.917Anas_platyrhynchos
ENSSSCG00000006752CSDE110088.346ENSACAG00000003120CSDE110092.231Anolis_carolinensis
ENSSSCG00000006752CSDE110099.087ENSANAG00000024665CSDE110098.815Aotus_nancymaae
ENSSSCG00000006752CSDE19373.404ENSANAG00000028396-9174.150Aotus_nancymaae
ENSSSCG00000006752CSDE110077.763ENSACLG00000013296csde110077.763Astatotilapia_calliptera
ENSSSCG00000006752CSDE110077.562ENSAMXG00000007436csde110077.562Astyanax_mexicanus
ENSSSCG00000006752CSDE110098.957ENSBTAG00000000678CSDE110098.957Bos_taurus
ENSSSCG00000006752CSDE110099.087ENSCJAG00000012565CSDE110098.934Callithrix_jacchus
ENSSSCG00000006752CSDE19899.202ENSCAFG00000009618CSDE110095.416Canis_familiaris
ENSSSCG00000006752CSDE110099.218ENSCAFG00020000481CSDE110099.218Canis_lupus_dingo
ENSSSCG00000006752CSDE110098.957ENSCHIG00000017250CSDE110098.957Capra_hircus
ENSSSCG00000006752CSDE110098.696ENSTSYG00000003747CSDE110098.747Carlito_syrichta
ENSSSCG00000006752CSDE19591.813ENSCAPG00000015128CSDE110091.813Cavia_aperea
ENSSSCG00000006752CSDE110092.522ENSCPOG00000040388CSDE110093.734Cavia_porcellus
ENSSSCG00000006752CSDE19576.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSSSCG00000006752CSDE19673.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSSSCG00000006752CSDE110099.087ENSCCAG00000036794CSDE110099.123Cebus_capucinus
ENSSSCG00000006752CSDE110099.348ENSCATG00000036962CSDE110099.171Cercocebus_atys
ENSSSCG00000006752CSDE110099.087ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSSSCG00000006752CSDE110099.171ENSCSAG00000001658CSDE110099.171Chlorocebus_sabaeus
ENSSSCG00000006752CSDE110099.387ENSCHOG00000000918CSDE19199.387Choloepus_hoffmanni
ENSSSCG00000006752CSDE110092.308ENSCPBG00000016547CSDE110092.607Chrysemys_picta_bellii
ENSSSCG00000006752CSDE19742.189ENSCING00000014465-9643.276Ciona_intestinalis
ENSSSCG00000006752CSDE19642.222ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSSSCG00000006752CSDE19993.236ENSCANG00000031069-10093.236Colobus_angolensis_palliatus
ENSSSCG00000006752CSDE110099.348ENSCANG00000035096CSDE110099.052Colobus_angolensis_palliatus
ENSSSCG00000006752CSDE110098.435ENSCGRG00001016833-10098.496Cricetulus_griseus_chok1gshd
ENSSSCG00000006752CSDE110081.226ENSCGRG00001014011-10081.226Cricetulus_griseus_chok1gshd
ENSSSCG00000006752CSDE110084.348ENSCGRG00000005831-10084.348Cricetulus_griseus_crigri
ENSSSCG00000006752CSDE19698.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSSSCG00000006752CSDE110077.633ENSCSEG00000002620csde110077.633Cynoglossus_semilaevis
ENSSSCG00000006752CSDE110077.143ENSCVAG00000001344csde110077.143Cyprinodon_variegatus
ENSSSCG00000006752CSDE110075.594ENSDARG00000074758csde110078.214Danio_rerio
ENSSSCG00000006752CSDE110098.438ENSDNOG00000010287-9398.438Dasypus_novemcinctus
ENSSSCG00000006752CSDE18070.722ENSDNOG00000034464-10073.913Dasypus_novemcinctus
ENSSSCG00000006752CSDE19998.204ENSDORG00000011609Csde110098.204Dipodomys_ordii
ENSSSCG00000006752CSDE19848.156FBgn0263352Unr7348.795Drosophila_melanogaster
ENSSSCG00000006752CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSSSCG00000006752CSDE19977.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSSSCG00000006752CSDE19087.342ENSETEG00000006280-10087.342Echinops_telfairi
ENSSSCG00000006752CSDE17968.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSSSCG00000006752CSDE19954.433ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSSSCG00000006752CSDE110099.478ENSEASG00005006284CSDE110099.499Equus_asinus_asinus
ENSSSCG00000006752CSDE110099.478ENSECAG00000020885CSDE110099.499Equus_caballus
ENSSSCG00000006752CSDE19698.119ENSEEUG00000006286CSDE17498.953Erinaceus_europaeus
ENSSSCG00000006752CSDE110076.197ENSELUG00000015507csde110076.197Esox_lucius
ENSSSCG00000006752CSDE110099.478ENSFCAG00000029266CSDE110099.478Felis_catus
ENSSSCG00000006752CSDE110088.095ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSSSCG00000006752CSDE19998.802ENSFDAG00000007882CSDE110098.802Fukomys_damarensis
ENSSSCG00000006752CSDE19877.586ENSFHEG00000010799csde110077.154Fundulus_heteroclitus
ENSSSCG00000006752CSDE19974.529ENSGMOG00000012731csde110077.096Gadus_morhua
ENSSSCG00000006752CSDE19888.235ENSGALG00000002139CSDE19892.199Gallus_gallus
ENSSSCG00000006752CSDE19575.000ENSGAFG00000005241csde19875.000Gambusia_affinis
ENSSSCG00000006752CSDE19975.439ENSGACG00000004544csde110078.000Gasterosteus_aculeatus
ENSSSCG00000006752CSDE110091.917ENSGAGG00000017685CSDE110092.231Gopherus_agassizii
ENSSSCG00000006752CSDE110099.348ENSGGOG00000002164CSDE110099.348Gorilla_gorilla
ENSSSCG00000006752CSDE110077.763ENSHBUG00000020315csde110077.763Haplochromis_burtoni
ENSSSCG00000006752CSDE110089.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSSSCG00000006752CSDE19985.545ENSHGLG00000007471-9885.545Heterocephalus_glaber_female
ENSSSCG00000006752CSDE19689.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSSSCG00000006752CSDE110080.051ENSHGLG00000019549-10082.206Heterocephalus_glaber_female
ENSSSCG00000006752CSDE19989.371ENSHGLG00000008555-10089.371Heterocephalus_glaber_female
ENSSSCG00000006752CSDE19976.286ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSSSCG00000006752CSDE110088.787ENSHGLG00000009620-10089.474Heterocephalus_glaber_female
ENSSSCG00000006752CSDE19781.172ENSHGLG00100004195-10083.961Heterocephalus_glaber_male
ENSSSCG00000006752CSDE19980.726ENSHGLG00100002245-9984.481Heterocephalus_glaber_male
ENSSSCG00000006752CSDE19682.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSSSCG00000006752CSDE110098.827ENSHGLG00100019438-10098.872Heterocephalus_glaber_male
ENSSSCG00000006752CSDE110084.355ENSHGLG00100012072-10084.355Heterocephalus_glaber_male
ENSSSCG00000006752CSDE110080.078ENSHGLG00100001846-10080.078Heterocephalus_glaber_male
ENSSSCG00000006752CSDE19689.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSSSCG00000006752CSDE19983.180ENSHGLG00100007287-9883.180Heterocephalus_glaber_male
ENSSSCG00000006752CSDE110076.723ENSHCOG00000004158csde110076.723Hippocampus_comes
ENSSSCG00000006752CSDE110077.302ENSIPUG00000000355csde110077.302Ictalurus_punctatus
ENSSSCG00000006752CSDE19681.075ENSSTOG00000032722-9882.258Ictidomys_tridecemlineatus
ENSSSCG00000006752CSDE110080.435ENSSTOG00000030994-10080.435Ictidomys_tridecemlineatus
ENSSSCG00000006752CSDE19998.353ENSJJAG00000019571Csde110098.353Jaculus_jaculus
ENSSSCG00000006752CSDE110074.595ENSKMAG00000005685csde110076.638Kryptolebias_marmoratus
ENSSSCG00000006752CSDE110077.922ENSLBEG00000014770csde110077.922Labrus_bergylta
ENSSSCG00000006752CSDE19779.444ENSLACG00000018452CSDE19679.659Latimeria_chalumnae
ENSSSCG00000006752CSDE110078.052ENSLOCG00000010413csde19680.443Lepisosteus_oculatus
ENSSSCG00000006752CSDE110097.523ENSLAFG00000007150CSDE19697.523Loxodonta_africana
ENSSSCG00000006752CSDE110099.348ENSMFAG00000003674CSDE110099.348Macaca_fascicularis
ENSSSCG00000006752CSDE110099.348ENSMMUG00000001974CSDE110099.348Macaca_mulatta
ENSSSCG00000006752CSDE110099.348ENSMNEG00000045247CSDE110099.171Macaca_nemestrina
ENSSSCG00000006752CSDE110099.087ENSMLEG00000038673CSDE110098.934Mandrillus_leucophaeus
ENSSSCG00000006752CSDE110078.701ENSMAMG00000008821csde110078.701Mastacembelus_armatus
ENSSSCG00000006752CSDE110077.763ENSMZEG00005021675csde110077.763Maylandia_zebra
ENSSSCG00000006752CSDE110091.667ENSMGAG00000016381CSDE110091.667Meleagris_gallopavo
ENSSSCG00000006752CSDE19998.653ENSMAUG00000014031Csde110098.653Mesocricetus_auratus
ENSSSCG00000006752CSDE110098.435ENSMICG00000002050CSDE110098.223Microcebus_murinus
ENSSSCG00000006752CSDE110098.435ENSMOCG00000018960Csde110098.496Microtus_ochrogaster
ENSSSCG00000006752CSDE110078.052ENSMMOG00000015075csde110078.052Mola_mola
ENSSSCG00000006752CSDE110095.189ENSMODG00000004685CSDE110096.115Monodelphis_domestica
ENSSSCG00000006752CSDE110078.182ENSMALG00000007132csde110078.182Monopterus_albus
ENSSSCG00000006752CSDE110098.175MGP_CAROLIEiJ_G0025444Csde110098.246Mus_caroli
ENSSSCG00000006752CSDE110098.305ENSMUSG00000068823Csde110098.503Mus_musculus
ENSSSCG00000006752CSDE110098.566MGP_PahariEiJ_G0026888Csde110098.622Mus_pahari
ENSSSCG00000006752CSDE110098.566MGP_SPRETEiJ_G0026394Csde110098.622Mus_spretus
ENSSSCG00000006752CSDE19895.530ENSMPUG00000005753CSDE19999.489Mustela_putorius_furo
ENSSSCG00000006752CSDE110098.435ENSMLUG00000005681CSDE110094.550Myotis_lucifugus
ENSSSCG00000006752CSDE19998.503ENSNGAG00000021929Csde110098.503Nannospalax_galili
ENSSSCG00000006752CSDE19671.047ENSNGAG00000012599-10071.047Nannospalax_galili
ENSSSCG00000006752CSDE110077.763ENSNBRG00000020808csde110077.763Neolamprologus_brichardi
ENSSSCG00000006752CSDE110099.218ENSNLEG00000004842CSDE110099.052Nomascus_leucogenys
ENSSSCG00000006752CSDE19397.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSSSCG00000006752CSDE19895.973ENSOPRG00000005002CSDE18295.973Ochotona_princeps
ENSSSCG00000006752CSDE19670.534ENSODEG00000005979-9870.534Octodon_degus
ENSSSCG00000006752CSDE19998.503ENSODEG00000007383-10098.503Octodon_degus
ENSSSCG00000006752CSDE110073.195ENSONIG00000009309csde110075.580Oreochromis_niloticus
ENSSSCG00000006752CSDE110076.721ENSOANG00000003346-10080.050Ornithorhynchus_anatinus
ENSSSCG00000006752CSDE110098.435ENSOCUG00000016438CSDE110097.986Oryctolagus_cuniculus
ENSSSCG00000006752CSDE110077.893ENSORLG00000000707csde110077.893Oryzias_latipes
ENSSSCG00000006752CSDE110074.937ENSORLG00020005148csde110075.580Oryzias_latipes_hni
ENSSSCG00000006752CSDE110077.893ENSORLG00015019415csde110077.893Oryzias_latipes_hsok
ENSSSCG00000006752CSDE110078.442ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSSSCG00000006752CSDE110099.218ENSOGAG00000012127CSDE110095.379Otolemur_garnettii
ENSSSCG00000006752CSDE110099.087ENSOARG00000020034CSDE110095.261Ovis_aries
ENSSSCG00000006752CSDE110099.348ENSPPAG00000025861CSDE110099.348Pan_paniscus
ENSSSCG00000006752CSDE110099.478ENSPPRG00000006747CSDE110099.408Panthera_pardus
ENSSSCG00000006752CSDE110099.478ENSPTIG00000015468CSDE110099.499Panthera_tigris_altaica
ENSSSCG00000006752CSDE110099.348ENSPTRG00000033721CSDE110099.373Pan_troglodytes
ENSSSCG00000006752CSDE110099.348ENSPANG00000018873CSDE110099.348Papio_anubis
ENSSSCG00000006752CSDE110077.503ENSPKIG00000009459csde110077.503Paramormyrops_kingsleyae
ENSSSCG00000006752CSDE19195.796ENSPSIG00000003823CSDE19695.796Pelodiscus_sinensis
ENSSSCG00000006752CSDE110077.662ENSPMGG00000000772csde110077.662Periophthalmus_magnuspinnatus
ENSSSCG00000006752CSDE19998.952ENSPEMG00000020357-10098.952Peromyscus_maniculatus_bairdii
ENSSSCG00000006752CSDE110094.333ENSPCIG00000022587CSDE110096.241Phascolarctos_cinereus
ENSSSCG00000006752CSDE19975.621ENSPFOG00000012664csde110076.087Poecilia_formosa
ENSSSCG00000006752CSDE19771.582ENSPLAG00000017680csde19371.582Poecilia_latipinna
ENSSSCG00000006752CSDE19871.472ENSPMEG00000005094csde19671.472Poecilia_mexicana
ENSSSCG00000006752CSDE19975.207ENSPREG00000011631csde110074.310Poecilia_reticulata
ENSSSCG00000006752CSDE110095.363ENSPPYG00000000996CSDE110099.248Pongo_abelii
ENSSSCG00000006752CSDE110098.574ENSPCAG00000014368CSDE19698.574Procavia_capensis
ENSSSCG00000006752CSDE110099.087ENSPCOG00000017893CSDE110099.087Propithecus_coquereli
ENSSSCG00000006752CSDE19484.328ENSPCOG00000008223-9084.328Propithecus_coquereli
ENSSSCG00000006752CSDE110092.699ENSPVAG00000008225CSDE110088.981Pteropus_vampyrus
ENSSSCG00000006752CSDE110077.763ENSPNYG00000013745csde110077.763Pundamilia_nyererei
ENSSSCG00000006752CSDE110078.052ENSPNAG00000001958csde110078.052Pygocentrus_nattereri
ENSSSCG00000006752CSDE110094.612ENSRNOG00000061058Csde110098.496Rattus_norvegicus
ENSSSCG00000006752CSDE110095.573ENSRBIG00000038088-9997.465Rhinopithecus_bieti
ENSSSCG00000006752CSDE110093.628ENSRBIG00000038966-10093.609Rhinopithecus_bieti
ENSSSCG00000006752CSDE110099.348ENSRROG00000043101CSDE110099.171Rhinopithecus_roxellana
ENSSSCG00000006752CSDE110099.087ENSSBOG00000035592CSDE110098.934Saimiri_boliviensis_boliviensis
ENSSSCG00000006752CSDE110095.958ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSSSCG00000006752CSDE110077.243ENSSFOG00015007498csde110077.243Scleropages_formosus
ENSSSCG00000006752CSDE110078.571ENSSMAG00000007203csde110078.571Scophthalmus_maximus
ENSSSCG00000006752CSDE110078.052ENSSDUG00000015380csde110078.052Seriola_dumerili
ENSSSCG00000006752CSDE110078.052ENSSLDG00000008819csde110078.052Seriola_lalandi_dorsalis
ENSSSCG00000006752CSDE110098.044ENSSARG00000000738CSDE110093.373Sorex_araneus
ENSSSCG00000006752CSDE110091.656ENSSPUG00000008714CSDE110091.980Sphenodon_punctatus
ENSSSCG00000006752CSDE110077.922ENSSPAG00000000716csde110077.922Stegastes_partitus
ENSSSCG00000006752CSDE110087.125ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSSSCG00000006752CSDE110074.902ENSTRUG00000007996csde110074.902Takifugu_rubripes
ENSSSCG00000006752CSDE18881.749ENSTNIG00000010878csde110081.749Tetraodon_nigroviridis
ENSSSCG00000006752CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSSSCG00000006752CSDE110098.696ENSTTRG00000015583CSDE110094.905Tursiops_truncatus
ENSSSCG00000006752CSDE19294.693ENSUAMG00000024289-9994.693Ursus_americanus
ENSSSCG00000006752CSDE19399.357ENSUAMG00000021779-10099.357Ursus_americanus
ENSSSCG00000006752CSDE19299.762ENSUMAG00000011714-9999.762Ursus_maritimus
ENSSSCG00000006752CSDE110091.656ENSUMAG00000009720-9791.656Ursus_maritimus
ENSSSCG00000006752CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSSSCG00000006752CSDE19494.591ENSVVUG00000009890CSDE19499.123Vulpes_vulpes
ENSSSCG00000006752CSDE110082.522ENSXETG00000021448csde110086.142Xenopus_tropicalis
ENSSSCG00000006752CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSSSCG00000006752CSDE19878.117ENSXMAG00000009080csde19878.117Xiphophorus_maculatus

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