EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000006783 (Gene tree)
Gene ID: 100152786
Gene Symbol: DDX20
Alias: DP103|GEMIN3
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 28697 bases
Position: chr4:108623954-108652650
Accession: 100152786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007235	DEAD	PF00270.29	1.3e-31	1	1
ENSSSCP00000037221	DEAD	PF00270.29	1.3e-31	1	1
ENSSSCP00000057272	DEAD	PF00270.29	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000047917	DDX20-203	3224	-	ENSSSCP00000037221	832 (aa)	-	F1SBP3
ENSSSCT00000007430	DDX20-202	2950	XM_001928544	ENSSSCP00000007235	832 (aa)	XP_001928579	F1SBP3
ENSSSCT00000049104	DDX20-201	4241	XM_021090025	ENSSSCP00000057272	832 (aa)	XP_020945684	F1SBP3

Gene Model

Click here to download ENSSSCG00000006783's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000006783	DDX20	53	33.258	ENSSSCG00000001400	DDX39B	95	35.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006783	DDX20	99	84.477	ENSG00000064703	DDX20	98	85.679	Homo_sapiens
ENSSSCG00000006783	DDX20	94	51.329	ENSAPOG00000017383	DDX20	98	52.116	Acanthochromis_polyacanthus
ENSSSCG00000006783	DDX20	98	86.946	ENSAMEG00000005344	DDX20	98	87.053	Ailuropoda_melanoleuca
ENSSSCG00000006783	DDX20	71	62.245	ENSACIG00000013095	ddx20	70	62.415	Amphilophus_citrinellus
ENSSSCG00000006783	DDX20	94	51.267	ENSAOCG00000013474	DDX20	98	52.005	Amphiprion_ocellaris
ENSSSCG00000006783	DDX20	94	51.143	ENSAPEG00000006690	ddx20	98	51.932	Amphiprion_percula
ENSSSCG00000006783	DDX20	71	62.881	ENSATEG00000002941	ddx20	99	51.566	Anabas_testudineus
ENSSSCG00000006783	DDX20	89	49.200	ENSAPLG00000013826	DDX20	99	48.871	Anas_platyrhynchos
ENSSSCG00000006783	DDX20	93	58.779	ENSACAG00000006235	DDX20	98	58.397	Anolis_carolinensis
ENSSSCG00000006783	DDX20	98	85.117	ENSANAG00000037881	DDX20	98	85.222	Aotus_nancymaae
ENSSSCG00000006783	DDX20	71	63.667	ENSACLG00000009485	ddx20	70	63.667	Astatotilapia_calliptera
ENSSSCG00000006783	DDX20	69	61.969	ENSAMXG00000040738	ddx20	70	61.969	Astyanax_mexicanus
ENSSSCG00000006783	DDX20	98	88.547	ENSBTAG00000018717	DDX20	98	88.547	Bos_taurus
ENSSSCG00000006783	DDX20	98	84.379	ENSCJAG00000013428	DDX20	94	82.963	Callithrix_jacchus
ENSSSCG00000006783	DDX20	98	85.872	ENSCAFG00000013674	DDX20	99	86.099	Canis_familiaris
ENSSSCG00000006783	DDX20	97	86.032	ENSCAFG00020008055	DDX20	97	92.331	Canis_lupus_dingo
ENSSSCG00000006783	DDX20	98	89.409	ENSCHIG00000011219	DDX20	98	89.409	Capra_hircus
ENSSSCG00000006783	DDX20	97	85.360	ENSTSYG00000000153	DDX20	98	85.309	Carlito_syrichta
ENSSSCG00000006783	DDX20	83	78.386	ENSCAPG00000017427	DDX20	100	78.386	Cavia_aperea
ENSSSCG00000006783	DDX20	99	82.667	ENSCPOG00000032340	DDX20	99	82.906	Cavia_porcellus
ENSSSCG00000006783	DDX20	99	84.597	ENSCCAG00000026759	DDX20	98	85.345	Cebus_capucinus
ENSSSCG00000006783	DDX20	99	84.255	ENSCATG00000039030	DDX20	98	85.450	Cercocebus_atys
ENSSSCG00000006783	DDX20	100	82.953	ENSCLAG00000008874	DDX20	99	83.820	Chinchilla_lanigera
ENSSSCG00000006783	DDX20	100	84.091	ENSCSAG00000001582	DDX20	98	85.573	Chlorocebus_sabaeus
ENSSSCG00000006783	DDX20	63	90.419	ENSCHOG00000002610	DDX20	82	90.419	Choloepus_hoffmanni
ENSSSCG00000006783	DDX20	93	62.708	ENSCPBG00000021256	DDX20	98	62.755	Chrysemys_picta_bellii
ENSSSCG00000006783	DDX20	99	84.255	ENSCANG00000041894	DDX20	98	85.573	Colobus_angolensis_palliatus
ENSSSCG00000006783	DDX20	98	82.454	ENSCGRG00001014132	Ddx20	98	82.577	Cricetulus_griseus_chok1gshd
ENSSSCG00000006783	DDX20	86	81.163	ENSCGRG00000002300	Ddx20	100	81.302	Cricetulus_griseus_crigri
ENSSSCG00000006783	DDX20	66	57.460	ENSCSEG00000018265	DDX20	72	57.460	Cynoglossus_semilaevis
ENSSSCG00000006783	DDX20	94	53.036	ENSCVAG00000014821	ddx20	99	53.160	Cyprinodon_variegatus
ENSSSCG00000006783	DDX20	70	63.293	ENSDARG00000061204	ddx20	96	52.399	Danio_rerio
ENSSSCG00000006783	DDX20	99	86.148	ENSDNOG00000030865	DDX20	98	86.576	Dasypus_novemcinctus
ENSSSCG00000006783	DDX20	97	85.309	ENSDORG00000011660	Ddx20	99	85.309	Dipodomys_ordii
ENSSSCG00000006783	DDX20	61	96.825	ENSETEG00000002726	DDX20	66	92.308	Echinops_telfairi
ENSSSCG00000006783	DDX20	98	87.946	ENSEASG00005005454	DDX20	98	88.054	Equus_asinus_asinus
ENSSSCG00000006783	DDX20	98	87.823	ENSECAG00000013565	DDX20	98	87.931	Equus_caballus
ENSSSCG00000006783	DDX20	94	48.492	ENSELUG00000010260	ddx20	99	48.188	Esox_lucius
ENSSSCG00000006783	DDX20	98	88.438	ENSFCAG00000025736	DDX20	98	88.547	Felis_catus
ENSSSCG00000006783	DDX20	87	56.812	ENSFALG00000000666	DDX20	99	56.735	Ficedula_albicollis
ENSSSCG00000006783	DDX20	99	78.356	ENSFDAG00000001140	DDX20	98	79.314	Fukomys_damarensis
ENSSSCG00000006783	DDX20	94	52.463	ENSFHEG00000019742	ddx20	99	52.351	Fundulus_heteroclitus
ENSSSCG00000006783	DDX20	93	61.125	ENSGALG00000001504	DDX20	99	60.742	Gallus_gallus
ENSSSCG00000006783	DDX20	94	52.716	ENSGAFG00000006427	ddx20	99	52.703	Gambusia_affinis
ENSSSCG00000006783	DDX20	93	63.138	ENSGAGG00000000130	DDX20	99	63.138	Gopherus_agassizii
ENSSSCG00000006783	DDX20	99	84.356	ENSGGOG00000015576	DDX20	98	85.556	Gorilla_gorilla
ENSSSCG00000006783	DDX20	71	63.667	ENSHBUG00000007853	ddx20	70	63.667	Haplochromis_burtoni
ENSSSCG00000006783	DDX20	97	83.128	ENSHGLG00000014848	DDX20	98	83.149	Heterocephalus_glaber_female
ENSSSCG00000006783	DDX20	97	83.128	ENSHGLG00100003740	DDX20	98	83.149	Heterocephalus_glaber_male
ENSSSCG00000006783	DDX20	94	50.493	ENSHCOG00000001915	ddx20	84	61.207	Hippocampus_comes
ENSSSCG00000006783	DDX20	69	62.284	ENSIPUG00000004876	ddx20	99	50.670	Ictalurus_punctatus
ENSSSCG00000006783	DDX20	98	86.839	ENSSTOG00000029089	DDX20	98	86.946	Ictidomys_tridecemlineatus
ENSSSCG00000006783	DDX20	99	83.032	ENSJJAG00000011198	Ddx20	98	83.867	Jaculus_jaculus
ENSSSCG00000006783	DDX20	71	61.513	ENSKMAG00000019022	ddx20	72	61.913	Kryptolebias_marmoratus
ENSSSCG00000006783	DDX20	96	50.667	ENSLBEG00000019194	ddx20	99	49.880	Labrus_bergylta
ENSSSCG00000006783	DDX20	94	54.332	ENSLACG00000018491	DDX20	72	66.267	Latimeria_chalumnae
ENSSSCG00000006783	DDX20	94	53.528	ENSLOCG00000010372	ddx20	100	53.260	Lepisosteus_oculatus
ENSSSCG00000006783	DDX20	98	81.350	ENSLAFG00000014646	DDX20	98	80.982	Loxodonta_africana
ENSSSCG00000006783	DDX20	99	84.375	ENSMFAG00000031755	DDX20	98	85.697	Macaca_fascicularis
ENSSSCG00000006783	DDX20	97	85.626	ENSMNEG00000005757	DDX20	98	85.697	Macaca_nemestrina
ENSSSCG00000006783	DDX20	97	85.502	ENSMLEG00000005722	DDX20	98	85.573	Mandrillus_leucophaeus
ENSSSCG00000006783	DDX20	76	63.265	ENSMAMG00000009654	ddx20	77	63.265	Mastacembelus_armatus
ENSSSCG00000006783	DDX20	71	63.667	ENSMZEG00005027081	ddx20	99	51.766	Maylandia_zebra
ENSSSCG00000006783	DDX20	91	59.663	ENSMGAG00000004624	DDX20	99	59.403	Meleagris_gallopavo
ENSSSCG00000006783	DDX20	96	82.750	ENSMAUG00000010659	Ddx20	98	81.840	Mesocricetus_auratus
ENSSSCG00000006783	DDX20	99	87.124	ENSMICG00000011509	DDX20	98	88.177	Microcebus_murinus
ENSSSCG00000006783	DDX20	98	81.104	ENSMOCG00000012954	Ddx20	98	81.595	Microtus_ochrogaster
ENSSSCG00000006783	DDX20	94	51.940	ENSMMOG00000013103	ddx20	99	51.564	Mola_mola
ENSSSCG00000006783	DDX20	95	75.032	ENSMODG00000001311	DDX20	95	75.032	Monodelphis_domestica
ENSSSCG00000006783	DDX20	94	49.639	ENSMALG00000010740	ddx20	67	62.457	Monopterus_albus
ENSSSCG00000006783	DDX20	98	83.292	MGP_CAROLIEiJ_G0025474	Ddx20	98	83.292	Mus_caroli
ENSSSCG00000006783	DDX20	98	83.047	ENSMUSG00000027905	Ddx20	98	83.047	Mus_musculus
ENSSSCG00000006783	DDX20	95	84.772	MGP_PahariEiJ_G0026919	Ddx20	98	83.272	Mus_pahari
ENSSSCG00000006783	DDX20	98	83.170	MGP_SPRETEiJ_G0026423	Ddx20	98	83.170	Mus_spretus
ENSSSCG00000006783	DDX20	97	88.054	ENSMPUG00000004921	DDX20	98	88.054	Mustela_putorius_furo
ENSSSCG00000006783	DDX20	83	81.844	ENSMLUG00000009676	DDX20	100	81.844	Myotis_lucifugus
ENSSSCG00000006783	DDX20	99	82.431	ENSNGAG00000022953	Ddx20	98	83.005	Nannospalax_galili
ENSSSCG00000006783	DDX20	94	52.905	ENSNBRG00000020244	ddx20	99	52.905	Neolamprologus_brichardi
ENSSSCG00000006783	DDX20	99	85.319	ENSNLEG00000004040	DDX20	98	86.420	Nomascus_leucogenys
ENSSSCG00000006783	DDX20	61	77.461	ENSMEUG00000013459	-	63	77.461	Notamacropus_eugenii
ENSSSCG00000006783	DDX20	67	91.429	ENSOPRG00000004035	DDX20	83	91.218	Ochotona_princeps
ENSSSCG00000006783	DDX20	71	63.667	ENSONIG00000012436	ddx20	99	53.567	Oreochromis_niloticus
ENSSSCG00000006783	DDX20	77	67.435	ENSOANG00000003318	DDX20	99	67.994	Ornithorhynchus_anatinus
ENSSSCG00000006783	DDX20	96	86.483	ENSOCUG00000025939	DDX20	98	85.767	Oryctolagus_cuniculus
ENSSSCG00000006783	DDX20	69	63.212	ENSORLG00000008949	ddx20	73	63.212	Oryzias_latipes
ENSSSCG00000006783	DDX20	69	63.040	ENSORLG00020003852	ddx20	99	51.698	Oryzias_latipes_hni
ENSSSCG00000006783	DDX20	94	51.990	ENSORLG00015020167	ddx20	99	51.810	Oryzias_latipes_hsok
ENSSSCG00000006783	DDX20	94	52.428	ENSOMEG00000013657	ddx20	99	52.428	Oryzias_melastigma
ENSSSCG00000006783	DDX20	99	86.899	ENSOGAG00000010503	DDX20	98	87.946	Otolemur_garnettii
ENSSSCG00000006783	DDX20	98	89.189	ENSOARG00000019651	DDX20	98	89.189	Ovis_aries
ENSSSCG00000006783	DDX20	99	84.356	ENSPPAG00000031680	DDX20	98	85.556	Pan_paniscus
ENSSSCG00000006783	DDX20	98	88.438	ENSPPRG00000022979	DDX20	98	88.547	Panthera_pardus
ENSSSCG00000006783	DDX20	99	84.236	ENSPTRG00000001105	DDX20	98	85.432	Pan_troglodytes
ENSSSCG00000006783	DDX20	99	84.615	ENSPANG00000017985	DDX20	98	85.820	Papio_anubis
ENSSSCG00000006783	DDX20	91	51.207	ENSPKIG00000020161	ddx20	99	51.399	Paramormyrops_kingsleyae
ENSSSCG00000006783	DDX20	87	59.259	ENSPSIG00000003636	DDX20	100	59.452	Pelodiscus_sinensis
ENSSSCG00000006783	DDX20	94	50.790	ENSPMGG00000005966	ddx20	99	50.425	Periophthalmus_magnuspinnatus
ENSSSCG00000006783	DDX20	98	84.521	ENSPEMG00000019595	Ddx20	98	84.521	Peromyscus_maniculatus_bairdii
ENSSSCG00000006783	DDX20	95	74.239	ENSPCIG00000027721	DDX20	96	74.239	Phascolarctos_cinereus
ENSSSCG00000006783	DDX20	94	53.284	ENSPFOG00000010540	ddx20	99	52.677	Poecilia_formosa
ENSSSCG00000006783	DDX20	94	53.465	ENSPLAG00000009925	ddx20	99	52.506	Poecilia_latipinna
ENSSSCG00000006783	DDX20	94	53.497	ENSPMEG00000005998	ddx20	99	52.638	Poecilia_mexicana
ENSSSCG00000006783	DDX20	94	53.827	ENSPREG00000018837	ddx20	99	51.770	Poecilia_reticulata
ENSSSCG00000006783	DDX20	99	84.717	ENSPPYG00000001026	DDX20	98	85.802	Pongo_abelii
ENSSSCG00000006783	DDX20	99	86.402	ENSPCOG00000025185	DDX20	98	87.438	Propithecus_coquereli
ENSSSCG00000006783	DDX20	99	85.439	ENSPVAG00000004664	DDX20	98	86.207	Pteropus_vampyrus
ENSSSCG00000006783	DDX20	71	63.667	ENSPNYG00000014433	ddx20	70	63.667	Pundamilia_nyererei
ENSSSCG00000006783	DDX20	72	61.231	ENSPNAG00000018148	ddx20	73	61.167	Pygocentrus_nattereri
ENSSSCG00000006783	DDX20	100	80.695	ENSRNOG00000015274	Ddx20	99	81.851	Rattus_norvegicus
ENSSSCG00000006783	DDX20	99	84.495	ENSRBIG00000030629	DDX20	98	85.820	Rhinopithecus_bieti
ENSSSCG00000006783	DDX20	99	84.495	ENSRROG00000030608	DDX20	98	85.820	Rhinopithecus_roxellana
ENSSSCG00000006783	DDX20	99	84.356	ENSSBOG00000024789	DDX20	98	85.099	Saimiri_boliviensis_boliviensis
ENSSSCG00000006783	DDX20	83	71.695	ENSSHAG00000014518	DDX20	99	71.695	Sarcophilus_harrisii
ENSSSCG00000006783	DDX20	94	52.179	ENSSFOG00015008354	ddx20	72	62.771	Scleropages_formosus
ENSSSCG00000006783	DDX20	94	53.567	ENSSDUG00000015980	ddx20	98	53.308	Seriola_dumerili
ENSSSCG00000006783	DDX20	94	51.551	ENSSLDG00000000437	ddx20	65	62.606	Seriola_lalandi_dorsalis
ENSSSCG00000006783	DDX20	87	71.547	ENSSARG00000013569	DDX20	88	71.547	Sorex_araneus
ENSSSCG00000006783	DDX20	96	51.605	ENSSPAG00000020022	ddx20	70	62.292	Stegastes_partitus
ENSSSCG00000006783	DDX20	78	64.536	ENSTGUG00000013660	DDX20	85	68.942	Taeniopygia_guttata
ENSSSCG00000006783	DDX20	94	50.187	ENSTRUG00000023712	ddx20	99	51.244	Takifugu_rubripes
ENSSSCG00000006783	DDX20	94	51.728	ENSTNIG00000019425	ddx20	85	62.241	Tetraodon_nigroviridis
ENSSSCG00000006783	DDX20	84	85.492	ENSTTRG00000005131	DDX20	82	90.805	Tursiops_truncatus
ENSSSCG00000006783	DDX20	98	84.113	ENSUAMG00000018924	DDX20	92	91.148	Ursus_americanus
ENSSSCG00000006783	DDX20	87	85.124	ENSUMAG00000013897	DDX20	92	85.124	Ursus_maritimus
ENSSSCG00000006783	DDX20	98	87.438	ENSVPAG00000010031	DDX20	98	87.546	Vicugna_pacos
ENSSSCG00000006783	DDX20	99	85.766	ENSVVUG00000016236	DDX20	98	86.543	Vulpes_vulpes
ENSSSCG00000006783	DDX20	93	56.242	ENSXETG00000013568	ddx20	100	55.112	Xenopus_tropicalis
ENSSSCG00000006783	DDX20	94	53.817	ENSXCOG00000007952	ddx20	97	53.226	Xiphophorus_couchianus
ENSSSCG00000006783	DDX20	94	53.036	ENSXMAG00000007573	ddx20	99	52.463	Xiphophorus_maculatus