EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006845 (Gene tree)
Gene ID: 100519481
Gene Symbol: STXBP3
Alias: UNC-18C
Full Name: syntaxin binding protein 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 114208 bases
Position: chr4:111233280-111347487
Accession: 100519481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007301	PRP38	PF03371.15	2.6e-57	1	1
ENSSSCP00000055759	PRP38	PF03371.15	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042570	STXBP3-205	2848	-	ENSSSCP00000055759	105 (aa)	-	A0A287BHZ7
ENSSSCT00000039057	STXBP3-201	3544	-	ENSSSCP00000032020	630 (aa)	-	A0A286ZKN4
ENSSSCT00000007497	STXBP3-204	4207	XM_001927806	ENSSSCP00000007301	547 (aa)	XP_001927841	F1S580
ENSSSCT00000007494	STXBP3-203	1785	-	ENSSSCP00000007298	594 (aa)	-	F1S5Y5
ENSSSCT00000042059	STXBP3-202	2869	XM_021090106	ENSSSCP00000048530	602 (aa)	XP_020945765	A0A287AXC7

Gene Model

Click here to download ENSSSCG00000006845's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006845	STXBP3	91	94.792	ENSECAG00000001892	PRPF38B	72	96.741	Equus_caballus