EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000006902 (Gene tree)
Gene ID: 110260381
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6762 bases
Position: chr4:124622419-124629180
Accession: 110260381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	1	6
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	2	6
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	3	6
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	4	6
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	5	6
ENSSSCP00000007358	zf-C2H2	PF00096.26	4.2e-27	6	6
ENSSSCP00000007358	zf-met	PF12874.7	5.3e-08	1	2
ENSSSCP00000007358	zf-met	PF12874.7	5.3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000007558	GFI1-201	1251	XM_021090229	ENSSSCP00000007358	416 (aa)	XP_020945888	F1S4G0

Gene Model

Click here to download ENSSSCG00000006902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000006902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000006902	GFI1	100	91.943	ENSG00000162676	GFI1	100	91.469	Homo_sapiens
ENSSSCG00000006902	GFI1	100	63.615	ENSAPOG00000015189	gfi1ab	100	62.353	Acanthochromis_polyacanthus
ENSSSCG00000006902	GFI1	100	64.524	ENSACIG00000016354	gfi1ab	100	64.762	Amphilophus_citrinellus
ENSSSCG00000006902	GFI1	100	55.164	ENSAOCG00000008339	gfi1ab	100	54.333	Amphiprion_ocellaris
ENSSSCG00000006902	GFI1	100	64.085	ENSAPEG00000023870	gfi1ab	100	63.232	Amphiprion_percula
ENSSSCG00000006902	GFI1	100	61.449	ENSATEG00000009167	gfi1ab	89	60.798	Anabas_testudineus
ENSSSCG00000006902	GFI1	87	76.022	ENSAPLG00000015700	GFI1	99	74.932	Anas_platyrhynchos
ENSSSCG00000006902	GFI1	100	72.430	ENSACAG00000004498	GFI1	100	71.729	Anolis_carolinensis
ENSSSCG00000006902	GFI1	100	90.521	ENSANAG00000019656	GFI1	100	89.573	Aotus_nancymaae
ENSSSCG00000006902	GFI1	100	64.387	ENSACLG00000026458	gfi1ab	93	64.455	Astatotilapia_calliptera
ENSSSCG00000006902	GFI1	100	61.758	ENSAMXG00000039600	gfi1ab	100	61.283	Astyanax_mexicanus
ENSSSCG00000006902	GFI1	75	59.554	ENSAMXG00000006669	GFI1	59	87.568	Astyanax_mexicanus
ENSSSCG00000006902	GFI1	100	95.952	ENSBTAG00000016723	GFI1	100	95.952	Bos_taurus
ENSSSCG00000006902	GFI1	100	89.336	ENSCJAG00000017609	GFI1	100	89.100	Callithrix_jacchus
ENSSSCG00000006902	GFI1	100	94.787	ENSCAFG00000020155	GFI1	100	94.787	Canis_familiaris
ENSSSCG00000006902	GFI1	100	94.787	ENSCAFG00020013371	GFI1	88	94.787	Canis_lupus_dingo
ENSSSCG00000006902	GFI1	100	95.952	ENSCHIG00000016135	GFI1	100	95.952	Capra_hircus
ENSSSCG00000006902	GFI1	100	90.238	ENSCPOG00000011727	GFI1	100	91.429	Cavia_porcellus
ENSSSCG00000006902	GFI1	100	90.047	ENSCCAG00000036072	GFI1	100	89.810	Cebus_capucinus
ENSSSCG00000006902	GFI1	100	91.469	ENSCATG00000037873	GFI1	100	90.995	Cercocebus_atys
ENSSSCG00000006902	GFI1	100	86.331	ENSCLAG00000005915	GFI1	100	85.681	Chinchilla_lanigera
ENSSSCG00000006902	GFI1	86	89.835	ENSCSAG00000001469	GFI1	100	89.286	Chlorocebus_sabaeus
ENSSSCG00000006902	GFI1	100	91.232	ENSCANG00000034077	GFI1	100	90.758	Colobus_angolensis_palliatus
ENSSSCG00000006902	GFI1	100	85.308	ENSCGRG00001015432	Gfi1	100	84.597	Cricetulus_griseus_chok1gshd
ENSSSCG00000006902	GFI1	100	59.338	ENSCSEG00000017729	GFI1	100	59.338	Cynoglossus_semilaevis
ENSSSCG00000006902	GFI1	100	60.238	ENSCVAG00000004930	GFI1	100	61.374	Cyprinodon_variegatus
ENSSSCG00000006902	GFI1	100	63.507	ENSCVAG00000011828	gfi1ab	100	62.322	Cyprinodon_variegatus
ENSSSCG00000006902	GFI1	100	65.166	ENSDARG00000044457	gfi1ab	100	64.692	Danio_rerio
ENSSSCG00000006902	GFI1	100	90.780	ENSDNOG00000000782	GFI1	97	91.962	Dasypus_novemcinctus
ENSSSCG00000006902	GFI1	100	94.511	ENSEASG00005015509	GFI1	86	94.511	Equus_asinus_asinus
ENSSSCG00000006902	GFI1	86	94.167	ENSECAG00000006647	GFI1	92	89.091	Equus_caballus
ENSSSCG00000006902	GFI1	100	86.058	ENSEEUG00000000198	GFI1	100	86.058	Erinaceus_europaeus
ENSSSCG00000006902	GFI1	100	60.476	ENSELUG00000019033	GFI1	100	60.238	Esox_lucius
ENSSSCG00000006902	GFI1	100	63.934	ENSELUG00000003015	gfi1ab	99	63.232	Esox_lucius
ENSSSCG00000006902	GFI1	100	95.024	ENSFCAG00000005914	GFI1	100	95.024	Felis_catus
ENSSSCG00000006902	GFI1	100	63.208	ENSFHEG00000010997	gfi1ab	100	62.500	Fundulus_heteroclitus
ENSSSCG00000006902	GFI1	100	60.698	ENSFHEG00000000341	GFI1	100	61.163	Fundulus_heteroclitus
ENSSSCG00000006902	GFI1	100	62.590	ENSGMOG00000007737	gfi1ab	100	61.871	Gadus_morhua
ENSSSCG00000006902	GFI1	100	75.117	ENSGALG00000043650	GFI1	100	74.178	Gallus_gallus
ENSSSCG00000006902	GFI1	100	59.953	ENSGAFG00000018063	GFI1	100	58.864	Gambusia_affinis
ENSSSCG00000006902	GFI1	100	65.238	ENSGAFG00000016637	gfi1ab	100	62.937	Gambusia_affinis
ENSSSCG00000006902	GFI1	100	64.508	ENSGACG00000004257	gfi1ab	97	63.723	Gasterosteus_aculeatus
ENSSSCG00000006902	GFI1	100	91.943	ENSGGOG00000005320	GFI1	100	91.469	Gorilla_gorilla
ENSSSCG00000006902	GFI1	100	64.916	ENSHBUG00000011969	gfi1ab	100	64.439	Haplochromis_burtoni
ENSSSCG00000006902	GFI1	100	90.238	ENSHGLG00000008020	GFI1	100	90.476	Heterocephalus_glaber_female
ENSSSCG00000006902	GFI1	100	90.238	ENSHGLG00100000610	GFI1	100	90.476	Heterocephalus_glaber_male
ENSSSCG00000006902	GFI1	100	57.518	ENSHCOG00000019555	GFI1	84	89.247	Hippocampus_comes
ENSSSCG00000006902	GFI1	100	53.846	ENSHCOG00000008590	gfi1ab	100	53.244	Hippocampus_comes
ENSSSCG00000006902	GFI1	100	59.294	ENSIPUG00000013414	GFI1	100	57.339	Ictalurus_punctatus
ENSSSCG00000006902	GFI1	100	63.484	ENSIPUG00000010071	gfi1ab	87	63.059	Ictalurus_punctatus
ENSSSCG00000006902	GFI1	100	89.573	ENSSTOG00000014583	GFI1	100	90.284	Ictidomys_tridecemlineatus
ENSSSCG00000006902	GFI1	100	64.371	ENSKMAG00000003810	gfi1ab	100	63.658	Kryptolebias_marmoratus
ENSSSCG00000006902	GFI1	100	62.356	ENSLBEG00000027776	gfi1ab	100	62.125	Labrus_bergylta
ENSSSCG00000006902	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSSSCG00000006902	GFI1	100	70.616	ENSLACG00000013362	GFI1	98	69.905	Latimeria_chalumnae
ENSSSCG00000006902	GFI1	100	68.000	ENSLOCG00000004711	gfi1ab	100	66.125	Lepisosteus_oculatus
ENSSSCG00000006902	GFI1	100	86.842	ENSLAFG00000018346	GFI1	100	85.407	Loxodonta_africana
ENSSSCG00000006902	GFI1	100	91.469	ENSMFAG00000045801	GFI1	100	90.995	Macaca_fascicularis
ENSSSCG00000006902	GFI1	100	91.469	ENSMNEG00000036338	GFI1	100	90.995	Macaca_nemestrina
ENSSSCG00000006902	GFI1	100	91.469	ENSMLEG00000036181	GFI1	100	90.995	Mandrillus_leucophaeus
ENSSSCG00000006902	GFI1	100	64.775	ENSMAMG00000008125	gfi1ab	100	64.133	Mastacembelus_armatus
ENSSSCG00000006902	GFI1	100	64.623	ENSMZEG00005009895	gfi1ab	100	64.692	Maylandia_zebra
ENSSSCG00000006902	GFI1	88	76.902	ENSMGAG00000008187	GFI1	100	75.815	Meleagris_gallopavo
ENSSSCG00000006902	GFI1	100	91.706	ENSMICG00000047208	GFI1	100	91.469	Microcebus_murinus
ENSSSCG00000006902	GFI1	100	60.476	ENSMMOG00000005556	gfi1ab	100	60.238	Mola_mola
ENSSSCG00000006902	GFI1	100	81.019	ENSMODG00000011802	GFI1	100	81.019	Monodelphis_domestica
ENSSSCG00000006902	GFI1	100	63.810	ENSMALG00000014672	gfi1ab	100	62.708	Monopterus_albus
ENSSSCG00000006902	GFI1	100	86.525	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSSSCG00000006902	GFI1	100	86.761	ENSMUSG00000029275	Gfi1	100	85.816	Mus_musculus
ENSSSCG00000006902	GFI1	100	85.816	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSSSCG00000006902	GFI1	100	86.052	MGP_SPRETEiJ_G0028507	Gfi1	100	85.579	Mus_spretus
ENSSSCG00000006902	GFI1	100	85.167	ENSMPUG00000004178	GFI1	97	85.167	Mustela_putorius_furo
ENSSSCG00000006902	GFI1	100	92.619	ENSMLUG00000015191	GFI1	97	91.905	Myotis_lucifugus
ENSSSCG00000006902	GFI1	100	63.256	ENSNBRG00000015774	gfi1ab	100	63.318	Neolamprologus_brichardi
ENSSSCG00000006902	GFI1	93	90.281	ENSNLEG00000010470	GFI1	97	90.281	Nomascus_leucogenys
ENSSSCG00000006902	GFI1	100	90.521	ENSOPRG00000001473	GFI1	100	89.810	Ochotona_princeps
ENSSSCG00000006902	GFI1	100	65.166	ENSONIG00000019246	gfi1ab	100	64.455	Oreochromis_niloticus
ENSSSCG00000006902	GFI1	86	87.705	ENSOCUG00000023553	GFI1	93	88.798	Oryctolagus_cuniculus
ENSSSCG00000006902	GFI1	100	60.095	ENSORLG00000005060	GFI1	100	60.142	Oryzias_latipes
ENSSSCG00000006902	GFI1	100	61.758	ENSORLG00000013806	gfi1ab	100	61.045	Oryzias_latipes
ENSSSCG00000006902	GFI1	75	64.087	ENSORLG00020002817	GFI1	90	63.467	Oryzias_latipes_hni
ENSSSCG00000006902	GFI1	100	61.995	ENSORLG00020001602	gfi1ab	100	61.283	Oryzias_latipes_hni
ENSSSCG00000006902	GFI1	100	61.085	ENSORLG00015006070	GFI1	100	60.142	Oryzias_latipes_hsok
ENSSSCG00000006902	GFI1	100	60.094	ENSOMEG00000016722	GFI1	100	60.329	Oryzias_melastigma
ENSSSCG00000006902	GFI1	100	77.698	ENSOGAG00000027913	GFI1	100	80.048	Otolemur_garnettii
ENSSSCG00000006902	GFI1	98	98.095	ENSOARG00000016329	GFI1	94	98.095	Ovis_aries
ENSSSCG00000006902	GFI1	100	78.436	ENSPPAG00000042186	GFI1	100	80.769	Pan_paniscus
ENSSSCG00000006902	GFI1	100	95.024	ENSPPRG00000007521	GFI1	100	95.024	Panthera_pardus
ENSSSCG00000006902	GFI1	100	91.943	ENSPTRG00000043053	GFI1	100	91.469	Pan_troglodytes
ENSSSCG00000006902	GFI1	100	91.469	ENSPANG00000016433	GFI1	100	90.995	Papio_anubis
ENSSSCG00000006902	GFI1	100	65.888	ENSPKIG00000004263	GFI1	100	64.953	Paramormyrops_kingsleyae
ENSSSCG00000006902	GFI1	88	76.152	ENSPSIG00000008734	GFI1	97	76.152	Pelodiscus_sinensis
ENSSSCG00000006902	GFI1	100	59.716	ENSPMGG00000012546	gfi1ab	100	60.817	Periophthalmus_magnuspinnatus
ENSSSCG00000006902	GFI1	100	82.588	ENSPCIG00000013728	GFI1	100	82.353	Phascolarctos_cinereus
ENSSSCG00000006902	GFI1	100	64.524	ENSPFOG00000023214	gfi1ab	100	62.295	Poecilia_formosa
ENSSSCG00000006902	GFI1	52	50.926	ENSPFOG00000024581	-	67	50.926	Poecilia_formosa
ENSSSCG00000006902	GFI1	100	64.524	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSSSCG00000006902	GFI1	100	60.981	ENSPLAG00000005376	GFI1	91	60.544	Poecilia_latipinna
ENSSSCG00000006902	GFI1	100	64.286	ENSPMEG00000013694	gfi1ab	100	63.333	Poecilia_mexicana
ENSSSCG00000006902	GFI1	100	60.981	ENSPMEG00000019299	GFI1	100	63.357	Poecilia_mexicana
ENSSSCG00000006902	GFI1	100	64.524	ENSPREG00000014097	gfi1ab	100	62.588	Poecilia_reticulata
ENSSSCG00000006902	GFI1	100	55.835	ENSPREG00000007997	GFI1	100	55.149	Poecilia_reticulata
ENSSSCG00000006902	GFI1	100	79.765	ENSPCAG00000011020	GFI1	100	79.294	Procavia_capensis
ENSSSCG00000006902	GFI1	100	91.232	ENSPCOG00000020540	GFI1	100	90.995	Propithecus_coquereli
ENSSSCG00000006902	GFI1	100	91.627	ENSPVAG00000006928	GFI1	100	88.995	Pteropus_vampyrus
ENSSSCG00000006902	GFI1	100	65.166	ENSPNYG00000021183	gfi1ab	100	64.455	Pundamilia_nyererei
ENSSSCG00000006902	GFI1	99	62.147	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSSSCG00000006902	GFI1	100	56.471	ENSPNAG00000028014	GFI1	100	56.235	Pygocentrus_nattereri
ENSSSCG00000006902	GFI1	100	62.053	ENSPNAG00000027258	gfi1ab	100	61.814	Pygocentrus_nattereri
ENSSSCG00000006902	GFI1	100	86.052	ENSRNOG00000002042	Gfi1	100	85.106	Rattus_norvegicus
ENSSSCG00000006902	GFI1	100	91.469	ENSRBIG00000036467	GFI1	100	91.469	Rhinopithecus_bieti
ENSSSCG00000006902	GFI1	100	91.469	ENSRROG00000031687	GFI1	100	91.469	Rhinopithecus_roxellana
ENSSSCG00000006902	GFI1	100	89.810	ENSSBOG00000031300	GFI1	100	89.810	Saimiri_boliviensis_boliviensis
ENSSSCG00000006902	GFI1	100	67.299	ENSSFOG00015020295	gfi1	100	66.825	Scleropages_formosus
ENSSSCG00000006902	GFI1	100	63.915	ENSSMAG00000002782	gfi1ab	100	63.033	Scophthalmus_maximus
ENSSSCG00000006902	GFI1	100	64.678	ENSSDUG00000022410	gfi1ab	100	64.200	Seriola_dumerili
ENSSSCG00000006902	GFI1	100	64.916	ENSSLDG00000020163	gfi1ab	100	64.439	Seriola_lalandi_dorsalis
ENSSSCG00000006902	GFI1	81	76.471	ENSSPAG00000009140	gfi1ab	100	76.471	Stegastes_partitus
ENSSSCG00000006902	GFI1	88	76.567	ENSTGUG00000006060	GFI1	100	75.477	Taeniopygia_guttata
ENSSSCG00000006902	GFI1	100	61.137	ENSTRUG00000000415	gfi1ab	100	60.427	Takifugu_rubripes
ENSSSCG00000006902	GFI1	100	61.337	ENSTNIG00000000651	gfi1ab	97	61.575	Tetraodon_nigroviridis
ENSSSCG00000006902	GFI1	100	94.286	ENSTTRG00000000082	GFI1	100	93.810	Tursiops_truncatus
ENSSSCG00000006902	GFI1	100	89.976	ENSUAMG00000021124	GFI1	91	89.976	Ursus_americanus
ENSSSCG00000006902	GFI1	100	68.660	ENSXETG00000023006	gfi1	98	67.143	Xenopus_tropicalis
ENSSSCG00000006902	GFI1	50	51.887	ENSXMAG00000006527	-	65	51.887	Xiphophorus_maculatus
ENSSSCG00000006902	GFI1	100	64.762	ENSXMAG00000010523	gfi1ab	100	62.824	Xiphophorus_maculatus
ENSSSCG00000006902	GFI1	87	55.228	ENSXMAG00000009274	GFI1	70	53.646	Xiphophorus_maculatus