EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000007046 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 189637 bases
Position: chr17:14775494-14965130
Accession: 100155529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007508	Gcd10p	PF04189.13	6.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000007715	TRMT6-201	5828	XM_001927396	ENSSSCP00000007508	693 (aa)	XP_001927431	F1SBM2

Gene Model

Click here to download ENSSSCG00000007046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007046	TRMT6	72	93.159	ENSG00000089195	TRMT6	100	93.578	Homo_sapiens
ENSSSCG00000007046	TRMT6	69	58.091	ENSAPOG00000008036	trmt6	98	58.848	Acanthochromis_polyacanthus
ENSSSCG00000007046	TRMT6	72	93.964	ENSAMEG00000010635	TRMT6	100	93.964	Ailuropoda_melanoleuca
ENSSSCG00000007046	TRMT6	69	54.489	ENSACIG00000004608	trmt6	97	55.324	Amphilophus_citrinellus
ENSSSCG00000007046	TRMT6	69	56.367	ENSAOCG00000024322	trmt6	98	56.367	Amphiprion_ocellaris
ENSSSCG00000007046	TRMT6	69	59.213	ENSAPEG00000017334	trmt6	98	59.213	Amphiprion_percula
ENSSSCG00000007046	TRMT6	66	57.826	ENSATEG00000018498	trmt6	97	58.785	Anabas_testudineus
ENSSSCG00000007046	TRMT6	65	75.658	ENSAPLG00000007761	TRMT6	99	75.492	Anas_platyrhynchos
ENSSSCG00000007046	TRMT6	69	69.311	ENSACAG00000000575	TRMT6	98	69.311	Anolis_carolinensis
ENSSSCG00000007046	TRMT6	72	92.555	ENSANAG00000021260	TRMT6	100	92.555	Aotus_nancymaae
ENSSSCG00000007046	TRMT6	69	55.072	ENSACLG00000026034	trmt6	97	55.072	Astatotilapia_calliptera
ENSSSCG00000007046	TRMT6	69	57.950	ENSAMXG00000017116	trmt6	95	57.917	Astyanax_mexicanus
ENSSSCG00000007046	TRMT6	72	94.567	ENSBTAG00000001314	TRMT6	100	94.567	Bos_taurus
ENSSSCG00000007046	TRMT6	72	92.153	ENSCJAG00000021296	TRMT6	100	92.153	Callithrix_jacchus
ENSSSCG00000007046	TRMT6	72	92.958	ENSCAFG00000005969	TRMT6	100	92.958	Canis_familiaris
ENSSSCG00000007046	TRMT6	72	92.958	ENSCAFG00020000777	TRMT6	100	92.958	Canis_lupus_dingo
ENSSSCG00000007046	TRMT6	72	95.171	ENSCHIG00000010338	TRMT6	100	95.171	Capra_hircus
ENSSSCG00000007046	TRMT6	72	93.360	ENSTSYG00000004286	TRMT6	100	93.360	Carlito_syrichta
ENSSSCG00000007046	TRMT6	60	86.715	ENSCAPG00000015467	TRMT6	93	86.715	Cavia_aperea
ENSSSCG00000007046	TRMT6	72	87.123	ENSCPOG00000013809	TRMT6	100	87.123	Cavia_porcellus
ENSSSCG00000007046	TRMT6	72	92.354	ENSCCAG00000026939	TRMT6	100	92.354	Cebus_capucinus
ENSSSCG00000007046	TRMT6	72	92.958	ENSCATG00000041111	TRMT6	100	92.958	Cercocebus_atys
ENSSSCG00000007046	TRMT6	71	90.020	ENSCLAG00000013978	TRMT6	99	90.020	Chinchilla_lanigera
ENSSSCG00000007046	TRMT6	72	92.958	ENSCSAG00000013461	TRMT6	100	92.958	Chlorocebus_sabaeus
ENSSSCG00000007046	TRMT6	60	80.593	ENSCHOG00000012537	TRMT6	83	80.593	Choloepus_hoffmanni
ENSSSCG00000007046	TRMT6	69	76.151	ENSCPBG00000023406	TRMT6	97	76.360	Chrysemys_picta_bellii
ENSSSCG00000007046	TRMT6	63	35.398	ENSCING00000002472	-	93	34.703	Ciona_intestinalis
ENSSSCG00000007046	TRMT6	63	38.739	ENSCSAVG00000001680	-	94	38.051	Ciona_savignyi
ENSSSCG00000007046	TRMT6	72	92.757	ENSCANG00000002381	TRMT6	100	92.757	Colobus_angolensis_palliatus
ENSSSCG00000007046	TRMT6	71	88.211	ENSCGRG00001003385	Trmt6	99	88.211	Cricetulus_griseus_chok1gshd
ENSSSCG00000007046	TRMT6	71	88.211	ENSCGRG00000006540	Trmt6	99	88.211	Cricetulus_griseus_crigri
ENSSSCG00000007046	TRMT6	69	59.664	ENSCSEG00000002228	trmt6	97	59.664	Cynoglossus_semilaevis
ENSSSCG00000007046	TRMT6	69	55.992	ENSCVAG00000000341	trmt6	98	55.992	Cyprinodon_variegatus
ENSSSCG00000007046	TRMT6	69	57.231	ENSDARG00000042344	trmt6	96	55.052	Danio_rerio
ENSSSCG00000007046	TRMT6	72	82.143	ENSDNOG00000012785	TRMT6	100	82.143	Dasypus_novemcinctus
ENSSSCG00000007046	TRMT6	72	87.751	ENSDORG00000006458	Trmt6	100	87.400	Dipodomys_ordii
ENSSSCG00000007046	TRMT6	73	92.338	ENSEASG00005001411	TRMT6	99	93.699	Equus_asinus_asinus
ENSSSCG00000007046	TRMT6	72	93.360	ENSECAG00000023914	TRMT6	100	93.360	Equus_caballus
ENSSSCG00000007046	TRMT6	72	90.342	ENSEEUG00000006635	TRMT6	100	90.342	Erinaceus_europaeus
ENSSSCG00000007046	TRMT6	69	58.750	ENSELUG00000013378	trmt6	78	60.398	Esox_lucius
ENSSSCG00000007046	TRMT6	72	93.763	ENSFCAG00000003102	TRMT6	100	93.763	Felis_catus
ENSSSCG00000007046	TRMT6	65	74.115	ENSFALG00000013575	TRMT6	97	74.336	Ficedula_albicollis
ENSSSCG00000007046	TRMT6	71	89.697	ENSFDAG00000015117	TRMT6	99	89.697	Fukomys_damarensis
ENSSSCG00000007046	TRMT6	68	57.796	ENSFHEG00000019957	trmt6	97	57.796	Fundulus_heteroclitus
ENSSSCG00000007046	TRMT6	58	63.780	ENSGMOG00000011059	trmt6	97	63.780	Gadus_morhua
ENSSSCG00000007046	TRMT6	68	74.105	ENSGALG00000009169	TRMT6	97	74.105	Gallus_gallus
ENSSSCG00000007046	TRMT6	69	56.173	ENSGAFG00000008618	trmt6	97	56.173	Gambusia_affinis
ENSSSCG00000007046	TRMT6	64	57.556	ENSGACG00000012471	trmt6	92	57.718	Gasterosteus_aculeatus
ENSSSCG00000007046	TRMT6	69	75.732	ENSGAGG00000008464	TRMT6	98	76.044	Gopherus_agassizii
ENSSSCG00000007046	TRMT6	72	93.159	ENSGGOG00000008597	TRMT6	100	93.159	Gorilla_gorilla
ENSSSCG00000007046	TRMT6	69	54.470	ENSHBUG00000016631	trmt6	97	55.072	Haplochromis_burtoni
ENSSSCG00000007046	TRMT6	71	88.687	ENSHGLG00000015405	TRMT6	100	88.330	Heterocephalus_glaber_female
ENSSSCG00000007046	TRMT6	71	88.687	ENSHGLG00100004120	TRMT6	100	88.330	Heterocephalus_glaber_male
ENSSSCG00000007046	TRMT6	69	57.588	ENSHCOG00000000118	trmt6	97	57.588	Hippocampus_comes
ENSSSCG00000007046	TRMT6	68	59.244	ENSIPUG00000019365	trmt6	97	59.368	Ictalurus_punctatus
ENSSSCG00000007046	TRMT6	71	89.899	ENSSTOG00000006863	TRMT6	100	89.537	Ictidomys_tridecemlineatus
ENSSSCG00000007046	TRMT6	71	86.061	ENSJJAG00000007315	Trmt6	99	86.061	Jaculus_jaculus
ENSSSCG00000007046	TRMT6	68	57.353	ENSKMAG00000001295	trmt6	97	58.246	Kryptolebias_marmoratus
ENSSSCG00000007046	TRMT6	69	55.556	ENSLBEG00000025654	trmt6	97	55.556	Labrus_bergylta
ENSSSCG00000007046	TRMT6	71	68.209	ENSLACG00000016478	TRMT6	99	68.209	Latimeria_chalumnae
ENSSSCG00000007046	TRMT6	69	64.167	ENSLOCG00000016451	trmt6	97	64.167	Lepisosteus_oculatus
ENSSSCG00000007046	TRMT6	72	89.718	ENSLAFG00000032216	TRMT6	99	89.718	Loxodonta_africana
ENSSSCG00000007046	TRMT6	72	92.757	ENSMFAG00000044360	TRMT6	100	92.757	Macaca_fascicularis
ENSSSCG00000007046	TRMT6	72	92.757	ENSMMUG00000013728	TRMT6	100	92.757	Macaca_mulatta
ENSSSCG00000007046	TRMT6	72	92.555	ENSMNEG00000041831	TRMT6	100	92.555	Macaca_nemestrina
ENSSSCG00000007046	TRMT6	72	93.159	ENSMLEG00000040762	TRMT6	100	93.159	Mandrillus_leucophaeus
ENSSSCG00000007046	TRMT6	69	58.402	ENSMAMG00000012101	trmt6	99	58.402	Mastacembelus_armatus
ENSSSCG00000007046	TRMT6	69	55.072	ENSMZEG00005010771	trmt6	97	55.072	Maylandia_zebra
ENSSSCG00000007046	TRMT6	68	73.895	ENSMGAG00000007678	TRMT6	96	73.895	Meleagris_gallopavo
ENSSSCG00000007046	TRMT6	71	87.805	ENSMAUG00000008719	Trmt6	99	87.805	Mesocricetus_auratus
ENSSSCG00000007046	TRMT6	72	93.763	ENSMICG00000011626	TRMT6	99	93.763	Microcebus_murinus
ENSSSCG00000007046	TRMT6	71	87.602	ENSMOCG00000022320	Trmt6	99	87.602	Microtus_ochrogaster
ENSSSCG00000007046	TRMT6	69	53.445	ENSMMOG00000004412	trmt6	97	53.445	Mola_mola
ENSSSCG00000007046	TRMT6	72	79.518	ENSMODG00000003784	TRMT6	99	79.200	Monodelphis_domestica
ENSSSCG00000007046	TRMT6	69	53.320	ENSMALG00000018140	trmt6	96	53.512	Monopterus_albus
ENSSSCG00000007046	TRMT6	71	84.476	MGP_CAROLIEiJ_G0024344	Trmt6	99	84.476	Mus_caroli
ENSSSCG00000007046	TRMT6	71	84.677	ENSMUSG00000037376	Trmt6	99	84.677	Mus_musculus
ENSSSCG00000007046	TRMT6	71	84.879	MGP_PahariEiJ_G0025789	Trmt6	99	84.879	Mus_pahari
ENSSSCG00000007046	TRMT6	71	84.879	MGP_SPRETEiJ_G0025264	Trmt6	99	84.879	Mus_spretus
ENSSSCG00000007046	TRMT6	63	92.857	ENSMPUG00000006317	TRMT6	93	92.857	Mustela_putorius_furo
ENSSSCG00000007046	TRMT6	72	91.348	ENSMLUG00000006491	TRMT6	100	91.348	Myotis_lucifugus
ENSSSCG00000007046	TRMT6	71	85.890	ENSNGAG00000015251	Trmt6	98	85.890	Nannospalax_galili
ENSSSCG00000007046	TRMT6	69	52.500	ENSNBRG00000020261	trmt6	97	52.500	Neolamprologus_brichardi
ENSSSCG00000007046	TRMT6	72	92.958	ENSNLEG00000013957	TRMT6	100	92.958	Nomascus_leucogenys
ENSSSCG00000007046	TRMT6	61	81.948	ENSMEUG00000009179	TRMT6	100	81.948	Notamacropus_eugenii
ENSSSCG00000007046	TRMT6	71	88.105	ENSOPRG00000008564	TRMT6	100	87.751	Ochotona_princeps
ENSSSCG00000007046	TRMT6	71	89.697	ENSODEG00000005657	TRMT6	100	89.336	Octodon_degus
ENSSSCG00000007046	TRMT6	69	55.510	ENSONIG00000000968	trmt6	97	55.785	Oreochromis_niloticus
ENSSSCG00000007046	TRMT6	65	80.659	ENSOANG00000008403	-	99	80.659	Ornithorhynchus_anatinus
ENSSSCG00000007046	TRMT6	71	92.323	ENSOCUG00000014669	TRMT6	99	92.323	Oryctolagus_cuniculus
ENSSSCG00000007046	TRMT6	68	55.042	ENSORLG00000009862	trmt6	97	55.072	Oryzias_latipes
ENSSSCG00000007046	TRMT6	69	55.280	ENSORLG00020001466	trmt6	97	55.280	Oryzias_latipes_hni
ENSSSCG00000007046	TRMT6	68	55.741	ENSORLG00015015552	trmt6	97	56.108	Oryzias_latipes_hsok
ENSSSCG00000007046	TRMT6	68	53.571	ENSOMEG00000019874	trmt6	97	54.375	Oryzias_melastigma
ENSSSCG00000007046	TRMT6	72	89.960	ENSOGAG00000012950	TRMT6	99	89.960	Otolemur_garnettii
ENSSSCG00000007046	TRMT6	72	94.567	ENSOARG00000017993	TRMT6	100	94.567	Ovis_aries
ENSSSCG00000007046	TRMT6	72	92.169	ENSPPAG00000036809	TRMT6	100	92.169	Pan_paniscus
ENSSSCG00000007046	TRMT6	72	93.763	ENSPPRG00000000424	TRMT6	100	93.763	Panthera_pardus
ENSSSCG00000007046	TRMT6	72	93.763	ENSPTIG00000010629	TRMT6	100	93.763	Panthera_tigris_altaica
ENSSSCG00000007046	TRMT6	72	93.159	ENSPTRG00000013231	TRMT6	100	93.578	Pan_troglodytes
ENSSSCG00000007046	TRMT6	72	93.159	ENSPANG00000009284	TRMT6	100	93.159	Papio_anubis
ENSSSCG00000007046	TRMT6	69	59.044	ENSPKIG00000003441	trmt6	97	57.380	Paramormyrops_kingsleyae
ENSSSCG00000007046	TRMT6	70	73.984	ENSPSIG00000017048	TRMT6	98	73.984	Pelodiscus_sinensis
ENSSSCG00000007046	TRMT6	62	56.075	ENSPMGG00000021074	trmt6	92	57.240	Periophthalmus_magnuspinnatus
ENSSSCG00000007046	TRMT6	69	88.050	ENSPEMG00000023268	Trmt6	99	87.247	Peromyscus_maniculatus_bairdii
ENSSSCG00000007046	TRMT6	72	79.719	ENSPCIG00000001546	TRMT6	96	79.400	Phascolarctos_cinereus
ENSSSCG00000007046	TRMT6	69	56.263	ENSPFOG00000003037	trmt6	97	56.263	Poecilia_formosa
ENSSSCG00000007046	TRMT6	69	56.667	ENSPLAG00000005143	trmt6	97	56.667	Poecilia_latipinna
ENSSSCG00000007046	TRMT6	69	57.054	ENSPMEG00000014875	trmt6	97	57.054	Poecilia_mexicana
ENSSSCG00000007046	TRMT6	69	52.818	ENSPREG00000016227	trmt6	97	54.262	Poecilia_reticulata
ENSSSCG00000007046	TRMT6	72	92.958	ENSPPYG00000010691	TRMT6	100	92.958	Pongo_abelii
ENSSSCG00000007046	TRMT6	72	89.135	ENSPCAG00000012098	TRMT6	100	89.135	Procavia_capensis
ENSSSCG00000007046	TRMT6	72	93.976	ENSPCOG00000020723	TRMT6	100	93.976	Propithecus_coquereli
ENSSSCG00000007046	TRMT6	72	89.315	ENSPVAG00000007539	TRMT6	99	89.315	Pteropus_vampyrus
ENSSSCG00000007046	TRMT6	69	54.697	ENSPNYG00000000918	trmt6	98	54.697	Pundamilia_nyererei
ENSSSCG00000007046	TRMT6	69	59.290	ENSPNAG00000019279	trmt6	95	59.290	Pygocentrus_nattereri
ENSSSCG00000007046	TRMT6	71	85.918	ENSRNOG00000021270	Trmt6	98	85.918	Rattus_norvegicus
ENSSSCG00000007046	TRMT6	72	91.549	ENSRBIG00000031132	TRMT6	100	91.549	Rhinopithecus_bieti
ENSSSCG00000007046	TRMT6	72	92.757	ENSRROG00000045329	TRMT6	100	92.757	Rhinopithecus_roxellana
ENSSSCG00000007046	TRMT6	72	92.555	ENSSBOG00000033602	-	100	92.555	Saimiri_boliviensis_boliviensis
ENSSSCG00000007046	TRMT6	67	84.892	ENSSBOG00000019803	-	100	92.225	Saimiri_boliviensis_boliviensis
ENSSSCG00000007046	TRMT6	73	76.667	ENSSHAG00000010754	TRMT6	99	76.667	Sarcophilus_harrisii
ENSSSCG00000007046	TRMT6	69	62.500	ENSSFOG00015008429	trmt6	97	60.625	Scleropages_formosus
ENSSSCG00000007046	TRMT6	69	56.907	ENSSMAG00000005352	trmt6	98	56.549	Scophthalmus_maximus
ENSSSCG00000007046	TRMT6	69	57.829	ENSSDUG00000008294	trmt6	97	58.678	Seriola_dumerili
ENSSSCG00000007046	TRMT6	69	58.799	ENSSLDG00000002180	trmt6	97	59.175	Seriola_lalandi_dorsalis
ENSSSCG00000007046	TRMT6	72	85.111	ENSSARG00000005487	TRMT6	100	85.111	Sorex_araneus
ENSSSCG00000007046	TRMT6	69	58.969	ENSSPAG00000011628	trmt6	98	59.175	Stegastes_partitus
ENSSSCG00000007046	TRMT6	68	74.316	ENSTGUG00000002195	TRMT6	98	74.375	Taeniopygia_guttata
ENSSSCG00000007046	TRMT6	69	53.830	ENSTRUG00000007153	trmt6	98	53.830	Takifugu_rubripes
ENSSSCG00000007046	TRMT6	69	56.289	ENSTNIG00000010726	TRMT6	98	56.289	Tetraodon_nigroviridis
ENSSSCG00000007046	TRMT6	54	92.903	ENSTBEG00000016317	TRMT6	76	92.903	Tupaia_belangeri
ENSSSCG00000007046	TRMT6	72	94.366	ENSTTRG00000012889	TRMT6	100	94.366	Tursiops_truncatus
ENSSSCG00000007046	TRMT6	72	93.159	ENSUAMG00000008674	TRMT6	100	93.159	Ursus_americanus
ENSSSCG00000007046	TRMT6	72	93.561	ENSUMAG00000004999	TRMT6	100	93.561	Ursus_maritimus
ENSSSCG00000007046	TRMT6	72	92.231	ENSVPAG00000002371	TRMT6	100	92.231	Vicugna_pacos
ENSSSCG00000007046	TRMT6	72	93.360	ENSVVUG00000023370	TRMT6	100	93.360	Vulpes_vulpes
ENSSSCG00000007046	TRMT6	69	66.327	ENSXETG00000004501	trmt6	98	66.327	Xenopus_tropicalis
ENSSSCG00000007046	TRMT6	69	51.983	ENSXCOG00000007761	trmt6	98	51.983	Xiphophorus_couchianus
ENSSSCG00000007046	TRMT6	69	56.667	ENSXMAG00000008592	trmt6	97	56.667	Xiphophorus_maculatus