EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000007095 (Gene tree)
Gene ID: 100738796
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 18130 bases
Position: chr17:26719514-26737643
Accession: 100738796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007558	RNA_pol_Rpc34	PF05158.12	1.1e-105	1	1
ENSSSCP00000037671	RNA_pol_Rpc34	PF05158.12	8e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000007767	POLR3F-201	1846	XM_003483898	ENSSSCP00000007558	316 (aa)	XP_003483946	F1SBH4
ENSSSCT00000050283	POLR3F-202	1932	-	ENSSSCP00000037671	232 (aa)	-	A0A287A1N6

Gene Model

Click here to download ENSSSCG00000007095's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03020	RNA polymerase	KEGG
ssc04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007095	POLR3F	100	99.051	ENSG00000132664	POLR3F	100	99.051	Homo_sapiens
ENSSSCG00000007095	POLR3F	100	90.517	ENSAPOG00000008271	polr3f	100	85.127	Acanthochromis_polyacanthus
ENSSSCG00000007095	POLR3F	100	99.367	ENSAMEG00000005222	POLR3F	100	99.367	Ailuropoda_melanoleuca
ENSSSCG00000007095	POLR3F	100	91.379	ENSACIG00000006705	polr3f	100	80.063	Amphilophus_citrinellus
ENSSSCG00000007095	POLR3F	100	90.948	ENSAOCG00000000687	polr3f	100	85.759	Amphiprion_ocellaris
ENSSSCG00000007095	POLR3F	100	90.517	ENSAPEG00000015263	polr3f	100	85.443	Amphiprion_percula
ENSSSCG00000007095	POLR3F	100	92.241	ENSATEG00000015539	polr3f	100	88.727	Anabas_testudineus
ENSSSCG00000007095	POLR3F	100	95.690	ENSAPLG00000005533	POLR3F	100	94.545	Anas_platyrhynchos
ENSSSCG00000007095	POLR3F	100	94.397	ENSACAG00000014293	POLR3F	98	93.069	Anolis_carolinensis
ENSSSCG00000007095	POLR3F	100	98.734	ENSANAG00000026726	POLR3F	100	98.734	Aotus_nancymaae
ENSSSCG00000007095	POLR3F	100	91.379	ENSACLG00000003615	polr3f	100	86.392	Astatotilapia_calliptera
ENSSSCG00000007095	POLR3F	100	92.241	ENSAMXG00000036020	polr3f	100	87.025	Astyanax_mexicanus
ENSSSCG00000007095	POLR3F	100	99.051	ENSBTAG00000008825	POLR3F	100	99.051	Bos_taurus
ENSSSCG00000007095	POLR3F	97	36.889	WBGene00021112	W09C3.4	95	33.779	Caenorhabditis_elegans
ENSSSCG00000007095	POLR3F	100	98.734	ENSCJAG00000005159	POLR3F	100	98.734	Callithrix_jacchus
ENSSSCG00000007095	POLR3F	100	99.138	ENSCAFG00000005420	POLR3F	100	99.051	Canis_familiaris
ENSSSCG00000007095	POLR3F	100	99.138	ENSCAFG00020027500	POLR3F	100	99.051	Canis_lupus_dingo
ENSSSCG00000007095	POLR3F	100	99.051	ENSCHIG00000014743	POLR3F	100	99.051	Capra_hircus
ENSSSCG00000007095	POLR3F	100	98.734	ENSTSYG00000004207	POLR3F	100	98.734	Carlito_syrichta
ENSSSCG00000007095	POLR3F	93	55.743	ENSCAPG00000008423	POLR3F	75	82.468	Cavia_aperea
ENSSSCG00000007095	POLR3F	100	97.845	ENSCPOG00000002400	POLR3F	100	97.468	Cavia_porcellus
ENSSSCG00000007095	POLR3F	100	88.291	ENSCCAG00000021800	POLR3F	100	88.291	Cebus_capucinus
ENSSSCG00000007095	POLR3F	100	98.734	ENSCATG00000019507	POLR3F	100	98.734	Cercocebus_atys
ENSSSCG00000007095	POLR3F	100	98.276	ENSCLAG00000016296	POLR3F	100	98.101	Chinchilla_lanigera
ENSSSCG00000007095	POLR3F	100	98.734	ENSCSAG00000011513	POLR3F	100	98.734	Chlorocebus_sabaeus
ENSSSCG00000007095	POLR3F	73	98.876	ENSCHOG00000013268	POLR3F	73	98.876	Choloepus_hoffmanni
ENSSSCG00000007095	POLR3F	100	95.690	ENSCPBG00000023473	POLR3F	100	94.545	Chrysemys_picta_bellii
ENSSSCG00000007095	POLR3F	100	69.099	ENSCING00000001212	-	99	60.952	Ciona_intestinalis
ENSSSCG00000007095	POLR3F	72	66.272	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSSSCG00000007095	POLR3F	92	98.625	ENSCANG00000037390	POLR3F	100	98.625	Colobus_angolensis_palliatus
ENSSSCG00000007095	POLR3F	100	98.707	ENSCGRG00001002032	Polr3f	100	98.418	Cricetulus_griseus_chok1gshd
ENSSSCG00000007095	POLR3F	100	98.707	ENSCGRG00000010852	Polr3f	100	98.418	Cricetulus_griseus_crigri
ENSSSCG00000007095	POLR3F	100	90.086	ENSCSEG00000001247	polr3f	100	84.177	Cynoglossus_semilaevis
ENSSSCG00000007095	POLR3F	100	89.224	ENSCVAG00000007611	polr3f	100	84.810	Cyprinodon_variegatus
ENSSSCG00000007095	POLR3F	100	92.672	ENSDARG00000012572	polr3f	100	87.975	Danio_rerio
ENSSSCG00000007095	POLR3F	100	96.203	ENSDNOG00000010719	POLR3F	100	96.203	Dasypus_novemcinctus
ENSSSCG00000007095	POLR3F	100	98.734	ENSDORG00000016352	Polr3f	100	98.734	Dipodomys_ordii
ENSSSCG00000007095	POLR3F	99	56.522	FBgn0038951	CG5380	99	49.333	Drosophila_melanogaster
ENSSSCG00000007095	POLR3F	89	60.498	ENSETEG00000015485	-	100	60.498	Echinops_telfairi
ENSSSCG00000007095	POLR3F	100	81.034	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSSSCG00000007095	POLR3F	100	99.051	ENSEASG00005002022	POLR3F	100	99.051	Equus_asinus_asinus
ENSSSCG00000007095	POLR3F	100	99.051	ENSECAG00000009920	POLR3F	100	99.051	Equus_caballus
ENSSSCG00000007095	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSSSCG00000007095	POLR3F	100	93.103	ENSELUG00000001558	polr3f	100	88.608	Esox_lucius
ENSSSCG00000007095	POLR3F	100	99.367	ENSFCAG00000013828	POLR3F	100	99.367	Felis_catus
ENSSSCG00000007095	POLR3F	100	95.690	ENSFALG00000007623	POLR3F	100	94.909	Ficedula_albicollis
ENSSSCG00000007095	POLR3F	100	97.845	ENSFDAG00000002528	POLR3F	100	97.785	Fukomys_damarensis
ENSSSCG00000007095	POLR3F	100	88.362	ENSFHEG00000006450	polr3f	100	82.595	Fundulus_heteroclitus
ENSSSCG00000007095	POLR3F	100	96.552	ENSGALG00000008749	POLR3F	100	93.354	Gallus_gallus
ENSSSCG00000007095	POLR3F	100	89.224	ENSGAFG00000003698	polr3f	100	84.177	Gambusia_affinis
ENSSSCG00000007095	POLR3F	100	96.121	ENSGAGG00000006151	POLR3F	100	93.354	Gopherus_agassizii
ENSSSCG00000007095	POLR3F	100	99.051	ENSGGOG00000011543	POLR3F	100	99.051	Gorilla_gorilla
ENSSSCG00000007095	POLR3F	100	91.810	ENSHBUG00000013806	polr3f	100	86.709	Haplochromis_burtoni
ENSSSCG00000007095	POLR3F	100	98.418	ENSHGLG00000011867	POLR3F	100	98.418	Heterocephalus_glaber_female
ENSSSCG00000007095	POLR3F	100	98.418	ENSHGLG00100012577	POLR3F	100	98.418	Heterocephalus_glaber_male
ENSSSCG00000007095	POLR3F	100	81.034	ENSHCOG00000011751	polr3f	100	77.215	Hippocampus_comes
ENSSSCG00000007095	POLR3F	100	91.810	ENSIPUG00000013347	polr3f	99	87.138	Ictalurus_punctatus
ENSSSCG00000007095	POLR3F	100	99.367	ENSSTOG00000013588	POLR3F	100	99.367	Ictidomys_tridecemlineatus
ENSSSCG00000007095	POLR3F	100	98.734	ENSJJAG00000017513	Polr3f	100	98.734	Jaculus_jaculus
ENSSSCG00000007095	POLR3F	100	89.655	ENSKMAG00000016495	polr3f	100	81.091	Kryptolebias_marmoratus
ENSSSCG00000007095	POLR3F	100	91.379	ENSLBEG00000011998	polr3f	100	91.379	Labrus_bergylta
ENSSSCG00000007095	POLR3F	100	93.966	ENSLACG00000009371	POLR3F	100	89.873	Latimeria_chalumnae
ENSSSCG00000007095	POLR3F	100	93.966	ENSLOCG00000015701	polr3f	100	89.557	Lepisosteus_oculatus
ENSSSCG00000007095	POLR3F	100	98.734	ENSLAFG00000004929	POLR3F	100	98.734	Loxodonta_africana
ENSSSCG00000007095	POLR3F	100	98.734	ENSMFAG00000002227	POLR3F	100	98.734	Macaca_fascicularis
ENSSSCG00000007095	POLR3F	100	98.276	ENSMMUG00000004143	POLR3F	100	98.545	Macaca_mulatta
ENSSSCG00000007095	POLR3F	100	98.734	ENSMNEG00000033404	POLR3F	100	98.734	Macaca_nemestrina
ENSSSCG00000007095	POLR3F	100	98.734	ENSMLEG00000021905	POLR3F	100	98.734	Mandrillus_leucophaeus
ENSSSCG00000007095	POLR3F	100	90.948	ENSMAMG00000017975	polr3f	100	85.759	Mastacembelus_armatus
ENSSSCG00000007095	POLR3F	100	91.379	ENSMZEG00005015134	polr3f	100	86.709	Maylandia_zebra
ENSSSCG00000007095	POLR3F	100	96.552	ENSMGAG00000006691	POLR3F	100	93.038	Meleagris_gallopavo
ENSSSCG00000007095	POLR3F	100	98.734	ENSMAUG00000020176	Polr3f	100	98.734	Mesocricetus_auratus
ENSSSCG00000007095	POLR3F	100	99.367	ENSMICG00000044519	POLR3F	100	99.367	Microcebus_murinus
ENSSSCG00000007095	POLR3F	100	98.418	ENSMOCG00000018352	Polr3f	100	98.418	Microtus_ochrogaster
ENSSSCG00000007095	POLR3F	100	91.453	ENSMMOG00000018477	polr3f	100	87.542	Mola_mola
ENSSSCG00000007095	POLR3F	100	98.276	ENSMODG00000005624	POLR3F	100	97.468	Monodelphis_domestica
ENSSSCG00000007095	POLR3F	100	92.241	ENSMALG00000006685	polr3f	100	86.709	Monopterus_albus
ENSSSCG00000007095	POLR3F	100	98.418	MGP_CAROLIEiJ_G0024385	Polr3f	100	98.418	Mus_caroli
ENSSSCG00000007095	POLR3F	100	98.418	ENSMUSG00000027427	Polr3f	100	98.418	Mus_musculus
ENSSSCG00000007095	POLR3F	100	98.418	MGP_PahariEiJ_G0025829	Polr3f	100	98.418	Mus_pahari
ENSSSCG00000007095	POLR3F	100	98.418	MGP_SPRETEiJ_G0025304	Polr3f	100	98.418	Mus_spretus
ENSSSCG00000007095	POLR3F	100	77.231	ENSMPUG00000001252	-	100	77.231	Mustela_putorius_furo
ENSSSCG00000007095	POLR3F	100	99.138	ENSMLUG00000014844	POLR3F	100	99.051	Myotis_lucifugus
ENSSSCG00000007095	POLR3F	100	98.101	ENSNGAG00000010898	Polr3f	100	98.101	Nannospalax_galili
ENSSSCG00000007095	POLR3F	100	91.810	ENSNBRG00000020796	polr3f	100	87.025	Neolamprologus_brichardi
ENSSSCG00000007095	POLR3F	100	99.051	ENSNLEG00000009778	POLR3F	100	99.051	Nomascus_leucogenys
ENSSSCG00000007095	POLR3F	100	90.086	ENSMEUG00000010320	POLR3F	100	91.186	Notamacropus_eugenii
ENSSSCG00000007095	POLR3F	100	95.886	ENSOPRG00000003385	POLR3F	100	95.886	Ochotona_princeps
ENSSSCG00000007095	POLR3F	100	98.276	ENSODEG00000011521	POLR3F	100	97.785	Octodon_degus
ENSSSCG00000007095	POLR3F	100	91.379	ENSONIG00000006858	polr3f	100	85.443	Oreochromis_niloticus
ENSSSCG00000007095	POLR3F	100	97.845	ENSOANG00000001253	POLR3F	100	96.203	Ornithorhynchus_anatinus
ENSSSCG00000007095	POLR3F	100	98.418	ENSOCUG00000015067	POLR3F	100	98.418	Oryctolagus_cuniculus
ENSSSCG00000007095	POLR3F	100	89.224	ENSORLG00000022412	polr3f	100	84.177	Oryzias_latipes
ENSSSCG00000007095	POLR3F	100	89.224	ENSORLG00020021944	polr3f	100	84.177	Oryzias_latipes_hni
ENSSSCG00000007095	POLR3F	100	98.418	ENSOGAG00000002916	POLR3F	100	98.418	Otolemur_garnettii
ENSSSCG00000007095	POLR3F	100	99.051	ENSOARG00000000315	-	100	99.051	Ovis_aries
ENSSSCG00000007095	POLR3F	100	62.342	ENSOARG00000008647	-	100	62.342	Ovis_aries
ENSSSCG00000007095	POLR3F	100	99.051	ENSPPAG00000036681	POLR3F	100	99.051	Pan_paniscus
ENSSSCG00000007095	POLR3F	100	99.367	ENSPPRG00000024604	POLR3F	100	99.367	Panthera_pardus
ENSSSCG00000007095	POLR3F	100	99.367	ENSPTIG00000020292	POLR3F	100	99.367	Panthera_tigris_altaica
ENSSSCG00000007095	POLR3F	100	99.051	ENSPTRG00000013287	POLR3F	100	99.051	Pan_troglodytes
ENSSSCG00000007095	POLR3F	100	98.734	ENSPANG00000025015	POLR3F	100	98.734	Papio_anubis
ENSSSCG00000007095	POLR3F	100	92.672	ENSPKIG00000004427	polr3f	100	88.291	Paramormyrops_kingsleyae
ENSSSCG00000007095	POLR3F	100	97.845	ENSPSIG00000016613	POLR3F	100	95.636	Pelodiscus_sinensis
ENSSSCG00000007095	POLR3F	100	53.605	ENSPMGG00000018350	polr3f	100	56.329	Periophthalmus_magnuspinnatus
ENSSSCG00000007095	POLR3F	100	98.734	ENSPEMG00000006966	Polr3f	100	98.734	Peromyscus_maniculatus_bairdii
ENSSSCG00000007095	POLR3F	100	83.190	ENSPMAG00000005530	polr3f	100	79.747	Petromyzon_marinus
ENSSSCG00000007095	POLR3F	100	98.276	ENSPCIG00000000908	POLR3F	85	97.785	Phascolarctos_cinereus
ENSSSCG00000007095	POLR3F	100	89.655	ENSPFOG00000018334	polr3f	100	84.177	Poecilia_formosa
ENSSSCG00000007095	POLR3F	100	89.655	ENSPLAG00000021803	polr3f	100	84.177	Poecilia_latipinna
ENSSSCG00000007095	POLR3F	100	89.655	ENSPMEG00000013150	polr3f	100	84.177	Poecilia_mexicana
ENSSSCG00000007095	POLR3F	100	89.655	ENSPREG00000005278	polr3f	100	84.177	Poecilia_reticulata
ENSSSCG00000007095	POLR3F	100	99.051	ENSPPYG00000010737	POLR3F	100	99.051	Pongo_abelii
ENSSSCG00000007095	POLR3F	66	98.333	ENSPCAG00000004893	POLR3F	71	98.333	Procavia_capensis
ENSSSCG00000007095	POLR3F	100	99.367	ENSPCOG00000004543	POLR3F	100	99.367	Propithecus_coquereli
ENSSSCG00000007095	POLR3F	100	99.051	ENSPVAG00000000403	POLR3F	100	99.051	Pteropus_vampyrus
ENSSSCG00000007095	POLR3F	100	91.810	ENSPNYG00000016276	polr3f	100	86.709	Pundamilia_nyererei
ENSSSCG00000007095	POLR3F	100	92.241	ENSPNAG00000005164	polr3f	100	87.658	Pygocentrus_nattereri
ENSSSCG00000007095	POLR3F	100	98.734	ENSRNOG00000007548	Polr3f	85	98.734	Rattus_norvegicus
ENSSSCG00000007095	POLR3F	100	98.734	ENSRBIG00000021268	POLR3F	100	98.734	Rhinopithecus_bieti
ENSSSCG00000007095	POLR3F	100	98.734	ENSRROG00000039911	POLR3F	100	98.734	Rhinopithecus_roxellana
ENSSSCG00000007095	POLR3F	69	33.735	YNR003C	RPC34	52	33.735	Saccharomyces_cerevisiae
ENSSSCG00000007095	POLR3F	100	98.734	ENSSBOG00000018207	POLR3F	100	98.734	Saimiri_boliviensis_boliviensis
ENSSSCG00000007095	POLR3F	97	93.333	ENSSHAG00000018160	POLR3F	100	76.025	Sarcophilus_harrisii
ENSSSCG00000007095	POLR3F	100	93.534	ENSSFOG00015022433	polr3f	100	88.924	Scleropages_formosus
ENSSSCG00000007095	POLR3F	100	90.086	ENSSMAG00000021029	polr3f	100	85.127	Scophthalmus_maximus
ENSSSCG00000007095	POLR3F	100	80.172	ENSSDUG00000022435	polr3f	100	77.532	Seriola_dumerili
ENSSSCG00000007095	POLR3F	100	92.241	ENSSLDG00000012761	polr3f	100	86.392	Seriola_lalandi_dorsalis
ENSSSCG00000007095	POLR3F	91	99.048	ENSSARG00000006039	POLR3F	100	89.241	Sorex_araneus
ENSSSCG00000007095	POLR3F	100	96.121	ENSSPUG00000001873	POLR3F	100	93.987	Sphenodon_punctatus
ENSSSCG00000007095	POLR3F	90	89.423	ENSSPAG00000002092	polr3f	100	78.165	Stegastes_partitus
ENSSSCG00000007095	POLR3F	100	95.690	ENSTGUG00000005839	POLR3F	100	92.722	Taeniopygia_guttata
ENSSSCG00000007095	POLR3F	100	90.086	ENSTRUG00000012101	polr3f	100	84.494	Takifugu_rubripes
ENSSSCG00000007095	POLR3F	100	87.931	ENSTNIG00000006456	polr3f	100	83.228	Tetraodon_nigroviridis
ENSSSCG00000007095	POLR3F	100	82.595	ENSTBEG00000007921	POLR3F	100	82.595	Tupaia_belangeri
ENSSSCG00000007095	POLR3F	100	99.138	ENSTTRG00000002580	POLR3F	100	99.051	Tursiops_truncatus
ENSSSCG00000007095	POLR3F	72	98.193	ENSUAMG00000024166	POLR3F	100	98.193	Ursus_americanus
ENSSSCG00000007095	POLR3F	100	99.051	ENSUMAG00000024944	POLR3F	100	99.051	Ursus_maritimus
ENSSSCG00000007095	POLR3F	100	98.418	ENSVPAG00000009063	POLR3F	100	98.418	Vicugna_pacos
ENSSSCG00000007095	POLR3F	100	99.138	ENSVVUG00000012925	POLR3F	100	99.051	Vulpes_vulpes
ENSSSCG00000007095	POLR3F	100	94.828	ENSXETG00000024898	polr3f	100	89.241	Xenopus_tropicalis
ENSSSCG00000007095	POLR3F	100	89.655	ENSXCOG00000010301	polr3f	100	86.545	Xiphophorus_couchianus
ENSSSCG00000007095	POLR3F	100	89.655	ENSXMAG00000004604	polr3f	100	84.494	Xiphophorus_maculatus