EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000007275 (Gene tree)
Gene ID: 100157085
Gene Symbol: RALY
Alias: HNRPCL2|P542
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 95082 bases
Position: chr17:37447383-37542464
Accession: 100157085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000056965	RRM_1	PF00076.22	6.4e-12	1	1
ENSSSCP00000036779	RRM_1	PF00076.22	6.9e-12	1	1
ENSSSCP00000044472	RRM_1	PF00076.22	6.9e-12	1	1
ENSSSCP00000055454	RRM_1	PF00076.22	6.9e-12	1	1
ENSSSCP00000007747	RRM_1	PF00076.22	7.8e-12	1	1
ENSSSCP00000032559	RRM_1	PF00076.22	7.8e-12	1	1
ENSSSCP00000045685	RRM_1	PF00076.22	7.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051775	RALY-206	1350	XM_021077813	ENSSSCP00000056965	289 (aa)	XP_020933472	A0A287BLC1
ENSSSCT00000059666	RALY-203	1936	XM_021077801	ENSSSCP00000032559	327 (aa)	XP_020933460	F1S4Y9
ENSSSCT00000007960	RALY-202	1965	XM_001929104	ENSSSCP00000007747	327 (aa)	XP_001929139	F1S4Y9
ENSSSCT00000050590	RALY-205	1514	XM_005672865	ENSSSCP00000045685	327 (aa)	XP_005672922	F1S4Y9
ENSSSCT00000046368	RALY-204	1529	XM_005672868	ENSSSCP00000044472	311 (aa)	XP_005672925	A0A286ZYT0
ENSSSCT00000043976	RALY-207	1655	XM_021077812	ENSSSCP00000036779	311 (aa)	XP_020933471	A0A286ZYT0
ENSSSCT00000045140	RALY-201	1982	XM_003134403	ENSSSCP00000055454	311 (aa)	XP_003134451	A0A286ZYT0

Gene Model

Click here to download ENSSSCG00000007275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000007275	RALY	64	58.019	ENSSSCG00000038947	HNRNPC	99	51.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007275	RALY	100	82.263	ENSG00000125970	RALY	100	95.506	Homo_sapiens
ENSSSCG00000007275	RALY	65	77.358	ENSAPOG00000001026	raly	72	77.358	Acanthochromis_polyacanthus
ENSSSCG00000007275	RALY	100	86.239	ENSAMEG00000009050	RALY	100	83.824	Ailuropoda_melanoleuca
ENSSSCG00000007275	RALY	72	74.583	ENSACIG00000024288	raly	87	77.533	Amphilophus_citrinellus
ENSSSCG00000007275	RALY	65	77.358	ENSAOCG00000009883	raly	65	77.358	Amphiprion_ocellaris
ENSSSCG00000007275	RALY	65	77.830	ENSAPEG00000024106	raly	65	77.830	Amphiprion_percula
ENSSSCG00000007275	RALY	68	76.923	ENSATEG00000004870	raly	72	76.923	Anabas_testudineus
ENSSSCG00000007275	RALY	93	68.197	ENSAPLG00000012983	RALY	79	85.398	Anas_platyrhynchos
ENSSSCG00000007275	RALY	100	64.261	ENSACAG00000008983	RALY	88	66.565	Anolis_carolinensis
ENSSSCG00000007275	RALY	100	85.627	ENSANAG00000019376	RALY	100	85.627	Aotus_nancymaae
ENSSSCG00000007275	RALY	65	77.880	ENSACLG00000007561	raly	67	78.802	Astatotilapia_calliptera
ENSSSCG00000007275	RALY	100	86.495	ENSBTAG00000016524	RALY	100	87.138	Bos_taurus
ENSSSCG00000007275	RALY	100	84.244	ENSCJAG00000009449	-	100	84.244	Callithrix_jacchus
ENSSSCG00000007275	RALY	100	85.321	ENSCJAG00000018361	-	100	85.321	Callithrix_jacchus
ENSSSCG00000007275	RALY	100	85.321	ENSCAFG00000007490	RALY	100	86.850	Canis_familiaris
ENSSSCG00000007275	RALY	100	85.627	ENSCAFG00020005069	RALY	100	87.156	Canis_lupus_dingo
ENSSSCG00000007275	RALY	100	84.709	ENSCHIG00000026609	RALY	100	86.544	Capra_hircus
ENSSSCG00000007275	RALY	100	78.457	ENSTSYG00000002598	RALY	99	79.421	Carlito_syrichta
ENSSSCG00000007275	RALY	95	78.261	ENSCAPG00000008110	RALY	99	90.000	Cavia_aperea
ENSSSCG00000007275	RALY	100	85.714	ENSCPOG00000000309	RALY	100	96.209	Cavia_porcellus
ENSSSCG00000007275	RALY	100	85.015	ENSCCAG00000024548	RALY	100	85.015	Cebus_capucinus
ENSSSCG00000007275	RALY	100	85.627	ENSCATG00000031769	RALY	100	85.627	Cercocebus_atys
ENSSSCG00000007275	RALY	100	85.933	ENSCLAG00000016899	RALY	100	85.933	Chinchilla_lanigera
ENSSSCG00000007275	RALY	100	85.321	ENSCSAG00000012199	RALY	100	85.627	Chlorocebus_sabaeus
ENSSSCG00000007275	RALY	67	87.215	ENSCHOG00000000266	RALY	97	87.168	Choloepus_hoffmanni
ENSSSCG00000007275	RALY	100	66.159	ENSCPBG00000019164	RALY	84	85.398	Chrysemys_picta_bellii
ENSSSCG00000007275	RALY	100	82.875	ENSCANG00000037952	RALY	100	83.486	Colobus_angolensis_palliatus
ENSSSCG00000007275	RALY	100	87.781	ENSCGRG00001014652	Raly	100	87.781	Cricetulus_griseus_chok1gshd
ENSSSCG00000007275	RALY	100	87.781	ENSCGRG00000011726	Raly	100	87.781	Cricetulus_griseus_crigri
ENSSSCG00000007275	RALY	68	81.166	ENSDARG00000059972	raly	81	81.166	Danio_rerio
ENSSSCG00000007275	RALY	100	82.958	ENSDNOG00000046782	-	100	84.244	Dasypus_novemcinctus
ENSSSCG00000007275	RALY	96	82.428	ENSDNOG00000003227	-	99	84.345	Dasypus_novemcinctus
ENSSSCG00000007275	RALY	67	97.115	ENSDORG00000013400	Raly	99	97.115	Dipodomys_ordii
ENSSSCG00000007275	RALY	63	76.243	ENSETEG00000001919	-	63	76.562	Echinops_telfairi
ENSSSCG00000007275	RALY	67	83.562	ENSETEG00000012464	-	100	83.562	Echinops_telfairi
ENSSSCG00000007275	RALY	100	88.073	ENSEASG00005008501	RALY	100	88.073	Equus_asinus_asinus
ENSSSCG00000007275	RALY	100	88.379	ENSECAG00000030217	-	100	89.297	Equus_caballus
ENSSSCG00000007275	RALY	100	88.379	ENSECAG00000012357	RALY	100	89.297	Equus_caballus
ENSSSCG00000007275	RALY	100	88.379	ENSECAG00000037642	-	100	89.297	Equus_caballus
ENSSSCG00000007275	RALY	100	69.725	ENSEEUG00000005356	RALY	100	70.031	Erinaceus_europaeus
ENSSSCG00000007275	RALY	64	81.910	ENSELUG00000011138	raly	78	75.862	Esox_lucius
ENSSSCG00000007275	RALY	100	87.768	ENSFCAG00000025252	RALY	100	87.768	Felis_catus
ENSSSCG00000007275	RALY	100	85.852	ENSFDAG00000010175	RALY	100	98.824	Fukomys_damarensis
ENSSSCG00000007275	RALY	66	78.241	ENSFHEG00000018618	raly	82	78.241	Fundulus_heteroclitus
ENSSSCG00000007275	RALY	67	59.276	ENSGMOG00000012589	raly	99	59.276	Gadus_morhua
ENSSSCG00000007275	RALY	100	67.378	ENSGALG00000033696	RALY	83	87.054	Gallus_gallus
ENSSSCG00000007275	RALY	69	71.491	ENSGACG00000003636	raly	81	71.681	Gasterosteus_aculeatus
ENSSSCG00000007275	RALY	70	85.088	ENSGAGG00000016266	RALY	70	85.398	Gopherus_agassizii
ENSSSCG00000007275	RALY	100	83.486	ENSGGOG00000022709	RALY	100	84.709	Gorilla_gorilla
ENSSSCG00000007275	RALY	64	78.788	ENSHBUG00000021321	raly	67	78.788	Haplochromis_burtoni
ENSSSCG00000007275	RALY	100	87.156	ENSHGLG00000017779	-	99	95.714	Heterocephalus_glaber_female
ENSSSCG00000007275	RALY	100	77.814	ENSHGLG00000021175	-	100	77.814	Heterocephalus_glaber_female
ENSSSCG00000007275	RALY	100	62.058	ENSHGLG00100000278	-	100	62.379	Heterocephalus_glaber_male
ENSSSCG00000007275	RALY	100	65.916	ENSHGLG00100003829	-	100	66.881	Heterocephalus_glaber_male
ENSSSCG00000007275	RALY	100	87.156	ENSHGLG00100003933	RALY	100	97.872	Heterocephalus_glaber_male
ENSSSCG00000007275	RALY	69	55.804	ENSHCOG00000012268	raly	91	54.911	Hippocampus_comes
ENSSSCG00000007275	RALY	100	86.850	ENSSTOG00000008810	RALY	100	87.097	Ictidomys_tridecemlineatus
ENSSSCG00000007275	RALY	68	96.667	ENSJJAG00000008473	Raly	100	97.872	Jaculus_jaculus
ENSSSCG00000007275	RALY	66	75.610	ENSKMAG00000015656	raly	83	75.610	Kryptolebias_marmoratus
ENSSSCG00000007275	RALY	68	74.554	ENSLBEG00000022656	raly	85	75.446	Labrus_bergylta
ENSSSCG00000007275	RALY	68	81.166	ENSLACG00000008596	RALY	78	81.166	Latimeria_chalumnae
ENSSSCG00000007275	RALY	70	81.223	ENSLOCG00000007219	raly	81	82.743	Lepisosteus_oculatus
ENSSSCG00000007275	RALY	100	82.840	ENSLAFG00000000321	RALY	100	77.143	Loxodonta_africana
ENSSSCG00000007275	RALY	100	82.263	ENSMFAG00000033131	RALY	100	83.180	Macaca_fascicularis
ENSSSCG00000007275	RALY	100	82.569	ENSMMUG00000018093	RALY	100	83.486	Macaca_mulatta
ENSSSCG00000007275	RALY	100	82.875	ENSMNEG00000044988	RALY	100	83.792	Macaca_nemestrina
ENSSSCG00000007275	RALY	100	83.792	ENSMLEG00000028900	RALY	100	85.015	Mandrillus_leucophaeus
ENSSSCG00000007275	RALY	66	77.073	ENSMAMG00000012529	raly	62	78.049	Mastacembelus_armatus
ENSSSCG00000007275	RALY	64	78.283	ENSMZEG00005016550	raly	64	79.293	Maylandia_zebra
ENSSSCG00000007275	RALY	100	68.902	ENSMGAG00000002214	RALY	71	89.352	Meleagris_gallopavo
ENSSSCG00000007275	RALY	68	98.095	ENSMAUG00000005739	Raly	99	98.095	Mesocricetus_auratus
ENSSSCG00000007275	RALY	100	84.709	ENSMICG00000039074	RALY	100	85.015	Microcebus_murinus
ENSSSCG00000007275	RALY	100	88.746	ENSMOCG00000009450	Raly	100	88.424	Microtus_ochrogaster
ENSSSCG00000007275	RALY	68	76.889	ENSMMOG00000013788	raly	86	77.778	Mola_mola
ENSSSCG00000007275	RALY	100	58.929	ENSMODG00000002819	-	100	60.417	Monodelphis_domestica
ENSSSCG00000007275	RALY	69	75.000	ENSMALG00000007071	raly	58	75.000	Monopterus_albus
ENSSSCG00000007275	RALY	100	86.817	MGP_CAROLIEiJ_G0024519	Raly	100	98.582	Mus_caroli
ENSSSCG00000007275	RALY	100	87.460	ENSMUSG00000027593	Raly	100	98.582	Mus_musculus
ENSSSCG00000007275	RALY	100	87.781	MGP_PahariEiJ_G0025963	Raly	100	98.582	Mus_pahari
ENSSSCG00000007275	RALY	100	87.460	MGP_SPRETEiJ_G0025441	Raly	100	98.582	Mus_spretus
ENSSSCG00000007275	RALY	100	85.015	ENSMPUG00000017820	RALY	100	86.544	Mustela_putorius_furo
ENSSSCG00000007275	RALY	100	84.709	ENSMLUG00000005330	-	100	85.933	Myotis_lucifugus
ENSSSCG00000007275	RALY	100	78.287	ENSMLUG00000027895	-	98	77.676	Myotis_lucifugus
ENSSSCG00000007275	RALY	68	97.619	ENSNGAG00000001263	Raly	99	97.619	Nannospalax_galili
ENSSSCG00000007275	RALY	64	79.293	ENSNBRG00000014761	raly	67	79.293	Neolamprologus_brichardi
ENSSSCG00000007275	RALY	88	69.338	ENSNLEG00000010031	-	85	94.512	Nomascus_leucogenys
ENSSSCG00000007275	RALY	100	82.875	ENSOPRG00000008423	RALY	100	83.180	Ochotona_princeps
ENSSSCG00000007275	RALY	63	84.772	ENSODEG00000012831	-	100	84.772	Octodon_degus
ENSSSCG00000007275	RALY	100	78.593	ENSODEG00000008369	-	100	77.778	Octodon_degus
ENSSSCG00000007275	RALY	91	64.085	ENSODEG00000011160	-	100	66.197	Octodon_degus
ENSSSCG00000007275	RALY	65	77.880	ENSONIG00000004416	raly	75	78.802	Oreochromis_niloticus
ENSSSCG00000007275	RALY	100	85.933	ENSOCUG00000000477	RALY	86	86.850	Oryctolagus_cuniculus
ENSSSCG00000007275	RALY	100	80.122	ENSOGAG00000032337	RALY	100	80.122	Otolemur_garnettii
ENSSSCG00000007275	RALY	100	84.404	ENSOARG00000008957	RALY	100	86.239	Ovis_aries
ENSSSCG00000007275	RALY	100	82.569	ENSPPAG00000034951	RALY	100	84.098	Pan_paniscus
ENSSSCG00000007275	RALY	100	88.073	ENSPPRG00000014593	RALY	100	88.379	Panthera_pardus
ENSSSCG00000007275	RALY	100	88.073	ENSPTIG00000021910	RALY	100	88.379	Panthera_tigris_altaica
ENSSSCG00000007275	RALY	100	83.486	ENSPTRG00000013410	RALY	100	84.404	Pan_troglodytes
ENSSSCG00000007275	RALY	100	83.180	ENSPANG00000018093	RALY	100	84.404	Papio_anubis
ENSSSCG00000007275	RALY	70	77.826	ENSPKIG00000004894	raly	77	81.567	Paramormyrops_kingsleyae
ENSSSCG00000007275	RALY	63	81.250	ENSPSIG00000017714	RALY	81	74.262	Pelodiscus_sinensis
ENSSSCG00000007275	RALY	95	87.542	ENSPEMG00000021466	Raly	100	87.879	Peromyscus_maniculatus_bairdii
ENSSSCG00000007275	RALY	100	62.385	ENSPCIG00000011153	-	100	63.303	Phascolarctos_cinereus
ENSSSCG00000007275	RALY	100	83.180	ENSPPYG00000010932	RALY	100	84.098	Pongo_abelii
ENSSSCG00000007275	RALY	96	80.192	ENSPCAG00000016867	RALY	99	80.192	Procavia_capensis
ENSSSCG00000007275	RALY	100	84.709	ENSPCOG00000016363	RALY	100	84.404	Propithecus_coquereli
ENSSSCG00000007275	RALY	100	85.015	ENSPVAG00000015827	RALY	100	86.239	Pteropus_vampyrus
ENSSSCG00000007275	RALY	64	77.778	ENSPNYG00000011247	raly	64	78.788	Pundamilia_nyererei
ENSSSCG00000007275	RALY	71	78.970	ENSPNAG00000011812	raly	79	80.717	Pygocentrus_nattereri
ENSSSCG00000007275	RALY	100	86.174	ENSRNOG00000017405	Raly	100	86.174	Rattus_norvegicus
ENSSSCG00000007275	RALY	100	83.792	ENSRBIG00000030203	RALY	100	85.627	Rhinopithecus_bieti
ENSSSCG00000007275	RALY	100	85.627	ENSRROG00000038781	RALY	100	85.933	Rhinopithecus_roxellana
ENSSSCG00000007275	RALY	100	84.404	ENSSBOG00000001418	RALY	100	84.404	Saimiri_boliviensis_boliviensis
ENSSSCG00000007275	RALY	100	63.987	ENSSHAG00000016830	RALY	68	82.412	Sarcophilus_harrisii
ENSSSCG00000007275	RALY	70	77.826	ENSSFOG00015012304	raly	81	82.110	Scleropages_formosus
ENSSSCG00000007275	RALY	70	72.018	ENSSMAG00000001107	raly	73	75.455	Scophthalmus_maximus
ENSSSCG00000007275	RALY	69	74.348	ENSSDUG00000002411	raly	73	78.802	Seriola_dumerili
ENSSSCG00000007275	RALY	69	75.330	ENSSLDG00000017872	raly	75	76.549	Seriola_lalandi_dorsalis
ENSSSCG00000007275	RALY	100	63.609	ENSSARG00000002763	-	88	78.539	Sorex_araneus
ENSSSCG00000007275	RALY	92	65.918	ENSSPUG00000006251	RALY	84	88.073	Sphenodon_punctatus
ENSSSCG00000007275	RALY	59	81.871	ENSSPAG00000022480	-	76	75.635	Stegastes_partitus
ENSSSCG00000007275	RALY	66	87.963	ENSTGUG00000003715	RALY	100	88.889	Taeniopygia_guttata
ENSSSCG00000007275	RALY	100	74.695	ENSTBEG00000009812	RALY	100	74.695	Tupaia_belangeri
ENSSSCG00000007275	RALY	100	84.756	ENSTTRG00000006590	RALY	100	86.280	Tursiops_truncatus
ENSSSCG00000007275	RALY	97	84.227	ENSUAMG00000006993	RALY	99	85.804	Ursus_americanus
ENSSSCG00000007275	RALY	100	85.627	ENSUMAG00000024106	RALY	100	87.156	Ursus_maritimus
ENSSSCG00000007275	RALY	78	100.000	ENSVPAG00000000373	RALY	76	100.000	Vicugna_pacos
ENSSSCG00000007275	RALY	100	85.627	ENSVVUG00000004546	RALY	100	87.156	Vulpes_vulpes
ENSSSCG00000007275	RALY	96	53.767	ENSXETG00000019514	raly	79	71.616	Xenopus_tropicalis