EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000007362 (Gene tree)
Gene ID: 768102
Gene Symbol: SRSF6
Alias: SFRS6
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 24847 bases
Position: chr17:46118825-46143671
Accession: 768102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007842	RRM_1	PF00076.22	7.5e-33	1	2
ENSSSCP00000007842	RRM_1	PF00076.22	7.5e-33	2	2
ENSSSCP00000032081	RRM_1	PF00076.22	1.1e-32	1	2
ENSSSCP00000032081	RRM_1	PF00076.22	1.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008057	-	906	-	ENSSSCP00000007842	301 (aa)	-	A0A288CFV0
ENSSSCT00000047276	-	4411	-	ENSSSCP00000032081	345 (aa)	-	Q06AA0

Gene Model

Click here to download ENSSSCG00000007362's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000007362	SRSF6	66	54.626	ENSSSCG00000032583	SRSF5	66	64.835
ENSSSCG00000007362	SRSF6	56	41.714	ENSSSCG00000009906	SRSF9	71	42.286
ENSSSCG00000007362	SRSF6	66	41.148	ENSSSCG00000017626	-	78	42.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007362	SRSF6	100	96.821	ENSG00000124193	SRSF6	100	96.821	Homo_sapiens
ENSSSCG00000007362	SRSF6	94	87.077	ENSAMEG00000003710	SRSF6	94	87.077	Ailuropoda_melanoleuca
ENSSSCG00000007362	SRSF6	95	72.632	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSSSCG00000007362	SRSF6	86	70.992	ENSACIG00000020091	-	95	81.102	Amphilophus_citrinellus
ENSSSCG00000007362	SRSF6	61	85.792	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSSSCG00000007362	SRSF6	62	82.632	ENSAPEG00000020746	-	66	80.319	Amphiprion_percula
ENSSSCG00000007362	SRSF6	61	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSSSCG00000007362	SRSF6	60	83.516	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSSSCG00000007362	SRSF6	94	82.209	ENSACAG00000002061	SRSF6	92	82.609	Anolis_carolinensis
ENSSSCG00000007362	SRSF6	100	95.954	ENSANAG00000024080	SRSF6	100	95.954	Aotus_nancymaae
ENSSSCG00000007362	SRSF6	60	87.097	ENSAMXG00000003101	-	51	84.737	Astyanax_mexicanus
ENSSSCG00000007362	SRSF6	61	83.333	ENSAMXG00000042692	-	96	81.481	Astyanax_mexicanus
ENSSSCG00000007362	SRSF6	100	98.841	ENSBTAG00000008527	SRSF6	100	98.841	Bos_taurus
ENSSSCG00000007362	SRSF6	89	98.134	ENSCJAG00000048403	SRSF6	99	98.134	Callithrix_jacchus
ENSSSCG00000007362	SRSF6	100	98.841	ENSCAFG00000009289	SRSF6	100	98.841	Canis_familiaris
ENSSSCG00000007362	SRSF6	100	98.841	ENSCAFG00020013559	SRSF6	100	98.841	Canis_lupus_dingo
ENSSSCG00000007362	SRSF6	100	98.551	ENSCHIG00000009148	-	100	98.551	Capra_hircus
ENSSSCG00000007362	SRSF6	100	99.130	ENSCHIG00000015890	-	100	99.130	Capra_hircus
ENSSSCG00000007362	SRSF6	100	82.609	ENSTSYG00000026476	SRSF6	100	82.609	Carlito_syrichta
ENSSSCG00000007362	SRSF6	96	80.969	ENSCPOG00000011761	SRSF6	70	93.478	Cavia_porcellus
ENSSSCG00000007362	SRSF6	94	69.018	ENSCCAG00000018540	-	62	86.702	Cebus_capucinus
ENSSSCG00000007362	SRSF6	100	96.243	ENSCCAG00000026018	-	100	96.243	Cebus_capucinus
ENSSSCG00000007362	SRSF6	100	96.812	ENSCATG00000030794	SRSF6	100	96.812	Cercocebus_atys
ENSSSCG00000007362	SRSF6	96	97.578	ENSCLAG00000010247	SRSF6	94	96.605	Chinchilla_lanigera
ENSSSCG00000007362	SRSF6	100	96.812	ENSCSAG00000014022	SRSF6	100	96.812	Chlorocebus_sabaeus
ENSSSCG00000007362	SRSF6	100	82.319	ENSCHOG00000000561	SRSF6	100	82.319	Choloepus_hoffmanni
ENSSSCG00000007362	SRSF6	61	91.489	ENSCPBG00000018200	SRSF6	94	85.015	Chrysemys_picta_bellii
ENSSSCG00000007362	SRSF6	100	82.319	ENSCANG00000042529	-	100	82.319	Colobus_angolensis_palliatus
ENSSSCG00000007362	SRSF6	100	96.522	ENSCANG00000037774	-	100	96.522	Colobus_angolensis_palliatus
ENSSSCG00000007362	SRSF6	99	96.765	ENSCGRG00001022339	Srsf6	99	96.765	Cricetulus_griseus_chok1gshd
ENSSSCG00000007362	SRSF6	63	94.907	ENSCGRG00000006618	Srsf6	100	94.907	Cricetulus_griseus_crigri
ENSSSCG00000007362	SRSF6	61	83.957	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSSSCG00000007362	SRSF6	96	97.578	ENSDNOG00000008410	SRSF6	94	95.679	Dasypus_novemcinctus
ENSSSCG00000007362	SRSF6	100	96.812	ENSDORG00000028378	Srsf6	100	96.812	Dipodomys_ordii
ENSSSCG00000007362	SRSF6	96	94.097	ENSETEG00000006221	SRSF6	94	91.049	Echinops_telfairi
ENSSSCG00000007362	SRSF6	100	98.261	ENSEASG00005023429	SRSF6	100	98.261	Equus_asinus_asinus
ENSSSCG00000007362	SRSF6	100	98.261	ENSECAG00000023932	SRSF6	100	98.261	Equus_caballus
ENSSSCG00000007362	SRSF6	57	93.846	ENSEEUG00000002324	SRSF6	90	93.909	Erinaceus_europaeus
ENSSSCG00000007362	SRSF6	60	84.530	ENSELUG00000013506	SRSF6	70	89.744	Esox_lucius
ENSSSCG00000007362	SRSF6	100	98.841	ENSFCAG00000032814	SRSF6	100	98.841	Felis_catus
ENSSSCG00000007362	SRSF6	96	80.277	ENSFDAG00000012191	SRSF6	93	78.086	Fukomys_damarensis
ENSSSCG00000007362	SRSF6	96	72.509	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSSSCG00000007362	SRSF6	60	82.320	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSSSCG00000007362	SRSF6	71	61.633	ENSGMOG00000006105	srsf6a	62	70.950	Gadus_morhua
ENSSSCG00000007362	SRSF6	93	82.012	ENSGALG00000000990	SRSF6	94	82.424	Gallus_gallus
ENSSSCG00000007362	SRSF6	98	58.912	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSSSCG00000007362	SRSF6	61	91.489	ENSGAGG00000003238	SRSF6	94	85.015	Gopherus_agassizii
ENSSSCG00000007362	SRSF6	50	90.604	ENSGGOG00000043139	-	99	84.783	Gorilla_gorilla
ENSSSCG00000007362	SRSF6	100	96.821	ENSGGOG00000009808	SRSF6	100	96.821	Gorilla_gorilla
ENSSSCG00000007362	SRSF6	72	74.123	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSSSCG00000007362	SRSF6	96	97.578	ENSHGLG00000007348	SRSF6	94	96.605	Heterocephalus_glaber_female
ENSSSCG00000007362	SRSF6	90	67.524	ENSHGLG00000007701	-	58	78.075	Heterocephalus_glaber_female
ENSSSCG00000007362	SRSF6	96	79.931	ENSHGLG00100005043	SRSF6	93	78.395	Heterocephalus_glaber_male
ENSSSCG00000007362	SRSF6	95	65.172	ENSHCOG00000002740	srsf6a	57	82.065	Hippocampus_comes
ENSSSCG00000007362	SRSF6	58	82.955	ENSIPUG00000016856	SRSF6	51	66.977	Ictalurus_punctatus
ENSSSCG00000007362	SRSF6	61	86.885	ENSIPUG00000004776	-	64	86.413	Ictalurus_punctatus
ENSSSCG00000007362	SRSF6	96	96.886	ENSSTOG00000010866	SRSF6	94	96.296	Ictidomys_tridecemlineatus
ENSSSCG00000007362	SRSF6	56	93.782	ENSJJAG00000020690	Srsf6	91	92.821	Jaculus_jaculus
ENSSSCG00000007362	SRSF6	87	67.143	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSSSCG00000007362	SRSF6	60	84.783	ENSLBEG00000007356	srsf6a	67	72.199	Labrus_bergylta
ENSSSCG00000007362	SRSF6	96	83.505	ENSLACG00000005466	SRSF6	96	73.476	Latimeria_chalumnae
ENSSSCG00000007362	SRSF6	69	96.234	ENSLAFG00000006682	SRSF6	89	96.507	Loxodonta_africana
ENSSSCG00000007362	SRSF6	100	96.812	ENSMFAG00000036925	SRSF6	100	96.812	Macaca_fascicularis
ENSSSCG00000007362	SRSF6	100	96.812	ENSMMUG00000006742	SRSF6	100	96.812	Macaca_mulatta
ENSSSCG00000007362	SRSF6	96	96.540	ENSMNEG00000038270	-	94	95.370	Macaca_nemestrina
ENSSSCG00000007362	SRSF6	100	96.232	ENSMNEG00000027392	-	100	96.232	Macaca_nemestrina
ENSSSCG00000007362	SRSF6	63	95.833	ENSMLEG00000031524	SRSF6	100	95.833	Mandrillus_leucophaeus
ENSSSCG00000007362	SRSF6	61	88.108	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSSSCG00000007362	SRSF6	60	83.978	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSSSCG00000007362	SRSF6	71	72.294	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSSSCG00000007362	SRSF6	100	96.821	ENSMICG00000008537	SRSF6	100	96.821	Microcebus_murinus
ENSSSCG00000007362	SRSF6	63	94.907	ENSMOCG00000018738	Srsf6	100	94.907	Microtus_ochrogaster
ENSSSCG00000007362	SRSF6	61	94.624	ENSMODG00000003107	SRSF6	95	86.769	Monodelphis_domestica
ENSSSCG00000007362	SRSF6	96	96.540	MGP_CAROLIEiJ_G0024606	Srsf6	95	96.296	Mus_caroli
ENSSSCG00000007362	SRSF6	99	96.176	ENSMUSG00000016921	Srsf6	99	96.176	Mus_musculus
ENSSSCG00000007362	SRSF6	96	96.886	MGP_PahariEiJ_G0026050	Srsf6	95	96.296	Mus_pahari
ENSSSCG00000007362	SRSF6	99	96.176	MGP_SPRETEiJ_G0025528	Srsf6	99	96.176	Mus_spretus
ENSSSCG00000007362	SRSF6	96	99.306	ENSMPUG00000017692	SRSF6	99	99.306	Mustela_putorius_furo
ENSSSCG00000007362	SRSF6	96	81.315	ENSMLUG00000016618	SRSF6	94	77.208	Myotis_lucifugus
ENSSSCG00000007362	SRSF6	99	95.000	ENSNGAG00000017560	Srsf6	99	95.000	Nannospalax_galili
ENSSSCG00000007362	SRSF6	61	83.060	ENSNBRG00000014709	-	58	84.239	Neolamprologus_brichardi
ENSSSCG00000007362	SRSF6	60	88.525	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSSSCG00000007362	SRSF6	100	96.821	ENSNLEG00000006524	SRSF6	100	96.821	Nomascus_leucogenys
ENSSSCG00000007362	SRSF6	61	94.624	ENSMEUG00000014615	SRSF6	62	95.745	Notamacropus_eugenii
ENSSSCG00000007362	SRSF6	75	96.139	ENSOPRG00000002017	-	100	96.139	Ochotona_princeps
ENSSSCG00000007362	SRSF6	61	84.699	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSSSCG00000007362	SRSF6	60	85.792	ENSONIG00000001925	-	52	88.172	Oreochromis_niloticus
ENSSSCG00000007362	SRSF6	84	57.480	ENSOCUG00000023999	-	70	62.570	Oryctolagus_cuniculus
ENSSSCG00000007362	SRSF6	96	83.784	ENSOCUG00000009785	-	98	84.122	Oryctolagus_cuniculus
ENSSSCG00000007362	SRSF6	51	70.968	ENSORLG00020017506	srsf6a	90	69.032	Oryzias_latipes_hni
ENSSSCG00000007362	SRSF6	53	72.826	ENSOMEG00000006001	srsf6a	63	60.331	Oryzias_melastigma
ENSSSCG00000007362	SRSF6	96	96.886	ENSOGAG00000014468	SRSF6	94	96.296	Otolemur_garnettii
ENSSSCG00000007362	SRSF6	96	95.156	ENSOARG00000003117	SRSF6	94	95.062	Ovis_aries
ENSSSCG00000007362	SRSF6	100	96.532	ENSPPAG00000034327	-	100	96.532	Pan_paniscus
ENSSSCG00000007362	SRSF6	96	83.391	ENSPPAG00000043131	-	100	85.852	Pan_paniscus
ENSSSCG00000007362	SRSF6	100	98.841	ENSPPRG00000008917	SRSF6	100	98.841	Panthera_pardus
ENSSSCG00000007362	SRSF6	63	98.148	ENSPTIG00000019153	SRSF6	100	98.148	Panthera_tigris_altaica
ENSSSCG00000007362	SRSF6	100	96.532	ENSPTRG00000044686	-	100	96.532	Pan_troglodytes
ENSSSCG00000007362	SRSF6	96	83.391	ENSPTRG00000046274	-	100	85.852	Pan_troglodytes
ENSSSCG00000007362	SRSF6	100	96.812	ENSPANG00000035224	SRSF6	100	96.812	Papio_anubis
ENSSSCG00000007362	SRSF6	59	74.586	ENSPKIG00000015703	-	95	60.403	Paramormyrops_kingsleyae
ENSSSCG00000007362	SRSF6	96	70.990	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSSSCG00000007362	SRSF6	96	74.061	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSSSCG00000007362	SRSF6	61	94.624	ENSPCIG00000003820	SRSF6	95	86.462	Phascolarctos_cinereus
ENSSSCG00000007362	SRSF6	61	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSSSCG00000007362	SRSF6	96	66.230	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSSSCG00000007362	SRSF6	61	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSSSCG00000007362	SRSF6	100	96.821	ENSPPYG00000011019	SRSF6	100	96.821	Pongo_abelii
ENSSSCG00000007362	SRSF6	95	96.503	ENSPCAG00000010954	SRSF6	85	96.503	Procavia_capensis
ENSSSCG00000007362	SRSF6	100	97.110	ENSPCOG00000026364	SRSF6	100	97.110	Propithecus_coquereli
ENSSSCG00000007362	SRSF6	96	97.578	ENSPVAG00000015232	SRSF6	94	95.679	Pteropus_vampyrus
ENSSSCG00000007362	SRSF6	60	88.525	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSSSCG00000007362	SRSF6	61	83.060	ENSPNYG00000004944	-	58	84.239	Pundamilia_nyererei
ENSSSCG00000007362	SRSF6	99	96.176	ENSRNOG00000006380	Srsf6	99	96.176	Rattus_norvegicus
ENSSSCG00000007362	SRSF6	100	95.072	ENSRBIG00000041414	SRSF6	100	95.072	Rhinopithecus_bieti
ENSSSCG00000007362	SRSF6	100	96.812	ENSRROG00000029989	SRSF6	100	96.812	Rhinopithecus_roxellana
ENSSSCG00000007362	SRSF6	96	68.166	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSSSCG00000007362	SRSF6	100	96.532	ENSSBOG00000033708	-	100	96.532	Saimiri_boliviensis_boliviensis
ENSSSCG00000007362	SRSF6	61	94.624	ENSSHAG00000012805	SRSF6	95	86.769	Sarcophilus_harrisii
ENSSSCG00000007362	SRSF6	89	63.743	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSSSCG00000007362	SRSF6	65	85.787	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSSSCG00000007362	SRSF6	77	64.773	ENSSMAG00000017447	-	68	69.027	Scophthalmus_maximus
ENSSSCG00000007362	SRSF6	61	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSSSCG00000007362	SRSF6	61	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSSSCG00000007362	SRSF6	75	96.525	ENSSARG00000001602	SRSF6	100	96.525	Sorex_araneus
ENSSSCG00000007362	SRSF6	61	93.989	ENSSPUG00000004967	SRSF6	94	86.728	Sphenodon_punctatus
ENSSSCG00000007362	SRSF6	86	70.677	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSSSCG00000007362	SRSF6	93	84.308	ENSTGUG00000003455	SRSF6	94	84.404	Taeniopygia_guttata
ENSSSCG00000007362	SRSF6	97	71.429	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSSSCG00000007362	SRSF6	85	93.750	ENSTBEG00000013448	SRSF6	92	93.471	Tupaia_belangeri
ENSSSCG00000007362	SRSF6	75	97.683	ENSTTRG00000015410	SRSF6	100	97.683	Tursiops_truncatus
ENSSSCG00000007362	SRSF6	100	98.841	ENSUAMG00000003559	SRSF6	100	98.841	Ursus_americanus
ENSSSCG00000007362	SRSF6	63	98.148	ENSUMAG00000001154	SRSF6	100	98.148	Ursus_maritimus
ENSSSCG00000007362	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSSSCG00000007362	SRSF6	61	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus