EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000007479 (Gene tree)
Gene ID: 100136902
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23388 bases
Position: chr17:53079636-53103023
Accession: 100136902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	1	6
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	2	6
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	3	6
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	4	6
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	5	6
ENSSSCP00000007969	zf-C2H2	PF00096.26	1.1e-26	6	6
ENSSSCP00000007969	zf-met	PF12874.7	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008186	SALL4-201	7829	XM_021077202	ENSSSCP00000007969	1050 (aa)	XP_020932861	F6Q2W9

Gene Model

Click here to download ENSSSCG00000007479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000007479	SALL4	99	63.462	ENSSSCG00000004858	SALL3	99	63.462
ENSSSCG00000007479	SALL4	84	62.745	ENSSSCG00000002836	SALL1	99	62.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007479	SALL4	100	85.161	ENSG00000101115	SALL4	100	87.500	Homo_sapiens
ENSSSCG00000007479	SALL4	100	43.377	ENSAPOG00000002465	sall4	100	43.377	Acanthochromis_polyacanthus
ENSSSCG00000007479	SALL4	100	86.038	ENSAMEG00000013250	-	100	86.038	Ailuropoda_melanoleuca
ENSSSCG00000007479	SALL4	100	42.137	ENSACIG00000017298	sall4	100	42.124	Amphilophus_citrinellus
ENSSSCG00000007479	SALL4	100	44.007	ENSAOCG00000023678	sall4	100	44.318	Amphiprion_ocellaris
ENSSSCG00000007479	SALL4	100	43.920	ENSAPEG00000000751	sall4	100	44.231	Amphiprion_percula
ENSSSCG00000007479	SALL4	100	42.758	ENSATEG00000024480	sall4	100	42.845	Anabas_testudineus
ENSSSCG00000007479	SALL4	100	54.028	ENSAPLG00000006498	SALL4	100	54.641	Anas_platyrhynchos
ENSSSCG00000007479	SALL4	100	54.308	ENSACAG00000012748	SALL4	100	54.696	Anolis_carolinensis
ENSSSCG00000007479	SALL4	100	85.364	ENSANAG00000023352	SALL4	100	88.793	Aotus_nancymaae
ENSSSCG00000007479	SALL4	100	42.708	ENSACLG00000017851	sall4	100	42.708	Astatotilapia_calliptera
ENSSSCG00000007479	SALL4	99	45.017	ENSAMXG00000001254	sall4	99	46.295	Astyanax_mexicanus
ENSSSCG00000007479	SALL4	100	82.707	ENSBTAG00000003101	SALL4	100	82.707	Bos_taurus
ENSSSCG00000007479	SALL4	80	85.647	ENSCJAG00000000591	SALL4	99	85.647	Callithrix_jacchus
ENSSSCG00000007479	SALL4	100	87.146	ENSCAFG00000011738	-	100	87.146	Canis_familiaris
ENSSSCG00000007479	SALL4	100	87.051	ENSCAFG00020021870	SALL4	100	87.051	Canis_lupus_dingo
ENSSSCG00000007479	SALL4	100	81.707	ENSCHIG00000026270	SALL4	100	81.895	Capra_hircus
ENSSSCG00000007479	SALL4	100	79.906	ENSTSYG00000007359	SALL4	100	85.714	Carlito_syrichta
ENSSSCG00000007479	SALL4	96	78.333	ENSCAPG00000012135	SALL4	97	78.431	Cavia_aperea
ENSSSCG00000007479	SALL4	100	80.057	ENSCCAG00000029512	-	100	81.944	Cebus_capucinus
ENSSSCG00000007479	SALL4	100	85.255	ENSCATG00000030757	SALL4	100	86.498	Cercocebus_atys
ENSSSCG00000007479	SALL4	100	80.396	ENSCLAG00000010479	SALL4	100	86.638	Chinchilla_lanigera
ENSSSCG00000007479	SALL4	100	85.066	ENSCSAG00000015269	SALL4	100	85.066	Chlorocebus_sabaeus
ENSSSCG00000007479	SALL4	100	56.140	ENSCPBG00000014995	SALL4	100	56.491	Chrysemys_picta_bellii
ENSSSCG00000007479	SALL4	100	85.066	ENSCANG00000036463	SALL4	100	85.066	Colobus_angolensis_palliatus
ENSSSCG00000007479	SALL4	100	73.734	ENSCGRG00001019569	Sall4	100	73.734	Cricetulus_griseus_chok1gshd
ENSSSCG00000007479	SALL4	100	73.640	ENSCGRG00000000462	Sall4	99	83.951	Cricetulus_griseus_crigri
ENSSSCG00000007479	SALL4	100	42.533	ENSCSEG00000014604	sall4	100	42.757	Cynoglossus_semilaevis
ENSSSCG00000007479	SALL4	100	43.755	ENSCVAG00000010815	sall4	100	43.864	Cyprinodon_variegatus
ENSSSCG00000007479	SALL4	99	44.578	ENSDARG00000044485	sall4	99	44.750	Danio_rerio
ENSSSCG00000007479	SALL4	100	82.342	ENSDNOG00000040633	SALL4	100	82.342	Dasypus_novemcinctus
ENSSSCG00000007479	SALL4	100	69.643	ENSDORG00000012841	Sall4	100	87.912	Dipodomys_ordii
ENSSSCG00000007479	SALL4	74	73.710	ENSETEG00000012475	-	66	73.710	Echinops_telfairi
ENSSSCG00000007479	SALL4	100	88.563	ENSECAG00000018533	SALL4	100	88.563	Equus_caballus
ENSSSCG00000007479	SALL4	100	79.868	ENSEEUG00000003649	SALL4	99	80.624	Erinaceus_europaeus
ENSSSCG00000007479	SALL4	100	43.504	ENSELUG00000005696	sall4	100	43.504	Esox_lucius
ENSSSCG00000007479	SALL4	100	83.679	ENSFCAG00000002822	SALL4	100	90.517	Felis_catus
ENSSSCG00000007479	SALL4	100	54.283	ENSFALG00000013149	SALL4	100	55.420	Ficedula_albicollis
ENSSSCG00000007479	SALL4	100	80.152	ENSFDAG00000017812	SALL4	100	86.207	Fukomys_damarensis
ENSSSCG00000007479	SALL4	100	44.531	ENSFHEG00000014187	sall4	100	44.531	Fundulus_heteroclitus
ENSSSCG00000007479	SALL4	100	42.128	ENSGMOG00000003822	sall4	100	42.105	Gadus_morhua
ENSSSCG00000007479	SALL4	100	54.083	ENSGALG00000041365	SALL4	100	54.474	Gallus_gallus
ENSSSCG00000007479	SALL4	100	43.879	ENSGAFG00000019925	sall4	100	44.100	Gambusia_affinis
ENSSSCG00000007479	SALL4	100	41.136	ENSGACG00000011124	sall4	100	41.445	Gasterosteus_aculeatus
ENSSSCG00000007479	SALL4	100	55.916	ENSGAGG00000002297	SALL4	100	56.266	Gopherus_agassizii
ENSSSCG00000007479	SALL4	100	85.161	ENSGGOG00000001832	SALL4	100	86.498	Gorilla_gorilla
ENSSSCG00000007479	SALL4	100	42.435	ENSHBUG00000007327	sall4	100	42.435	Haplochromis_burtoni
ENSSSCG00000007479	SALL4	96	81.773	ENSHGLG00000009043	SALL4	96	81.773	Heterocephalus_glaber_female
ENSSSCG00000007479	SALL4	96	81.872	ENSHGLG00100002722	SALL4	96	81.872	Heterocephalus_glaber_male
ENSSSCG00000007479	SALL4	100	42.695	ENSHCOG00000008519	sall4	100	43.094	Hippocampus_comes
ENSSSCG00000007479	SALL4	99	44.987	ENSIPUG00000019170	sall4	99	45.455	Ictalurus_punctatus
ENSSSCG00000007479	SALL4	68	87.179	ENSSTOG00000025002	SALL4	99	91.549	Ictidomys_tridecemlineatus
ENSSSCG00000007479	SALL4	100	80.263	ENSJJAG00000020688	Sall4	100	95.775	Jaculus_jaculus
ENSSSCG00000007479	SALL4	100	44.170	ENSKMAG00000002501	sall4	100	44.522	Kryptolebias_marmoratus
ENSSSCG00000007479	SALL4	100	42.782	ENSLBEG00000019951	sall4	100	43.106	Labrus_bergylta
ENSSSCG00000007479	SALL4	94	46.561	ENSLACG00000013898	SALL4	100	58.889	Latimeria_chalumnae
ENSSSCG00000007479	SALL4	100	47.990	ENSLOCG00000002427	sall4	100	48.164	Lepisosteus_oculatus
ENSSSCG00000007479	SALL4	100	83.491	ENSLAFG00000004309	SALL4	100	83.491	Loxodonta_africana
ENSSSCG00000007479	SALL4	100	85.350	ENSMFAG00000027169	SALL4	100	85.350	Macaca_fascicularis
ENSSSCG00000007479	SALL4	90	85.774	ENSMMUG00000003870	SALL4	100	87.931	Macaca_mulatta
ENSSSCG00000007479	SALL4	90	85.879	ENSMNEG00000035995	SALL4	100	86.498	Macaca_nemestrina
ENSSSCG00000007479	SALL4	100	85.066	ENSMLEG00000030467	SALL4	100	85.066	Mandrillus_leucophaeus
ENSSSCG00000007479	SALL4	100	43.433	ENSMAMG00000005223	sall4	100	43.691	Mastacembelus_armatus
ENSSSCG00000007479	SALL4	100	42.708	ENSMZEG00005023418	sall4	100	42.708	Maylandia_zebra
ENSSSCG00000007479	SALL4	79	63.462	ENSMGAG00000009344	SALL4	99	63.462	Meleagris_gallopavo
ENSSSCG00000007479	SALL4	100	73.127	ENSMAUG00000015814	Sall4	99	87.500	Mesocricetus_auratus
ENSSSCG00000007479	SALL4	100	84.325	ENSMICG00000000027	SALL4	100	87.069	Microcebus_murinus
ENSSSCG00000007479	SALL4	100	75.630	ENSMOCG00000018245	Sall4	99	93.151	Microtus_ochrogaster
ENSSSCG00000007479	SALL4	100	43.898	ENSMMOG00000014929	sall4	100	44.221	Mola_mola
ENSSSCG00000007479	SALL4	100	59.517	ENSMODG00000016387	SALL4	97	59.766	Monodelphis_domestica
ENSSSCG00000007479	SALL4	100	42.659	ENSMALG00000018709	sall4	100	42.671	Monopterus_albus
ENSSSCG00000007479	SALL4	100	71.402	MGP_CAROLIEiJ_G0024723	Sall4	98	94.444	Mus_caroli
ENSSSCG00000007479	SALL4	100	72.026	ENSMUSG00000027547	Sall4	98	94.444	Mus_musculus
ENSSSCG00000007479	SALL4	100	71.232	MGP_PahariEiJ_G0026164	Sall4	98	94.444	Mus_pahari
ENSSSCG00000007479	SALL4	100	72.026	MGP_SPRETEiJ_G0025643	Sall4	98	94.444	Mus_spretus
ENSSSCG00000007479	SALL4	100	86.064	ENSMPUG00000017543	SALL4	96	86.158	Mustela_putorius_furo
ENSSSCG00000007479	SALL4	96	83.547	ENSMLUG00000007060	-	100	83.547	Myotis_lucifugus
ENSSSCG00000007479	SALL4	100	74.340	ENSMLUG00000008405	-	100	74.340	Myotis_lucifugus
ENSSSCG00000007479	SALL4	99	62.098	ENSMLUG00000028073	-	99	61.909	Myotis_lucifugus
ENSSSCG00000007479	SALL4	100	78.551	ENSNGAG00000017833	Sall4	100	84.549	Nannospalax_galili
ENSSSCG00000007479	SALL4	100	41.950	ENSNBRG00000001829	sall4	100	42.037	Neolamprologus_brichardi
ENSSSCG00000007479	SALL4	100	85.728	ENSNLEG00000007013	SALL4	100	85.728	Nomascus_leucogenys
ENSSSCG00000007479	SALL4	83	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSSSCG00000007479	SALL4	100	79.887	ENSOPRG00000011640	SALL4	100	79.887	Ochotona_princeps
ENSSSCG00000007479	SALL4	100	42.078	ENSONIG00000016557	sall4	100	42.546	Oreochromis_niloticus
ENSSSCG00000007479	SALL4	100	60.908	ENSOANG00000008667	SALL4	97	60.908	Ornithorhynchus_anatinus
ENSSSCG00000007479	SALL4	96	79.882	ENSOCUG00000011797	SALL4	100	79.882	Oryctolagus_cuniculus
ENSSSCG00000007479	SALL4	100	43.463	ENSORLG00000016130	sall4	100	43.822	Oryzias_latipes
ENSSSCG00000007479	SALL4	100	43.108	ENSORLG00020007339	sall4	100	43.210	Oryzias_latipes_hni
ENSSSCG00000007479	SALL4	100	42.969	ENSORLG00015002265	sall4	100	43.144	Oryzias_latipes_hsok
ENSSSCG00000007479	SALL4	100	43.345	ENSOMEG00000017344	sall4	100	43.712	Oryzias_melastigma
ENSSSCG00000007479	SALL4	94	82.843	ENSOGAG00000013799	SALL4	99	82.843	Otolemur_garnettii
ENSSSCG00000007479	SALL4	100	76.604	ENSOARG00000014570	SALL4	100	76.604	Ovis_aries
ENSSSCG00000007479	SALL4	100	85.255	ENSPPAG00000038064	SALL4	100	86.498	Pan_paniscus
ENSSSCG00000007479	SALL4	100	83.774	ENSPPRG00000008677	SALL4	100	90.517	Panthera_pardus
ENSSSCG00000007479	SALL4	100	85.350	ENSPTRG00000013631	SALL4	100	86.498	Pan_troglodytes
ENSSSCG00000007479	SALL4	90	85.879	ENSPANG00000021792	SALL4	100	86.498	Papio_anubis
ENSSSCG00000007479	SALL4	100	44.580	ENSPKIG00000007074	sall4	100	44.668	Paramormyrops_kingsleyae
ENSSSCG00000007479	SALL4	100	55.302	ENSPSIG00000009066	SALL4	100	55.741	Pelodiscus_sinensis
ENSSSCG00000007479	SALL4	100	42.290	ENSPMGG00000022551	sall4	100	42.266	Periophthalmus_magnuspinnatus
ENSSSCG00000007479	SALL4	100	76.239	ENSPEMG00000022706	Sall4	99	95.833	Peromyscus_maniculatus_bairdii
ENSSSCG00000007479	SALL4	100	58.180	ENSPCIG00000022838	SALL4	97	58.736	Phascolarctos_cinereus
ENSSSCG00000007479	SALL4	100	44.166	ENSPFOG00000001442	sall4	100	44.166	Poecilia_formosa
ENSSSCG00000007479	SALL4	100	44.080	ENSPLAG00000008760	sall4	100	44.080	Poecilia_latipinna
ENSSSCG00000007479	SALL4	100	44.080	ENSPMEG00000008497	sall4	100	44.080	Poecilia_mexicana
ENSSSCG00000007479	SALL4	100	43.917	ENSPREG00000021140	sall4	100	43.917	Poecilia_reticulata
ENSSSCG00000007479	SALL4	100	84.972	ENSPPYG00000011138	SALL4	100	84.972	Pongo_abelii
ENSSSCG00000007479	SALL4	100	78.450	ENSPCAG00000004726	SALL4	99	78.450	Procavia_capensis
ENSSSCG00000007479	SALL4	100	84.863	ENSPCOG00000016321	SALL4	100	87.931	Propithecus_coquereli
ENSSSCG00000007479	SALL4	94	83.871	ENSPVAG00000002075	SALL4	94	84.173	Pteropus_vampyrus
ENSSSCG00000007479	SALL4	100	42.201	ENSPNYG00000021738	sall4	100	42.201	Pundamilia_nyererei
ENSSSCG00000007479	SALL4	99	44.521	ENSPNAG00000020929	sall4	99	44.521	Pygocentrus_nattereri
ENSSSCG00000007479	SALL4	100	72.736	ENSRNOG00000050035	Sall4	100	77.419	Rattus_norvegicus
ENSSSCG00000007479	SALL4	100	85.066	ENSRBIG00000039876	SALL4	100	85.774	Rhinopithecus_bieti
ENSSSCG00000007479	SALL4	100	85.161	ENSRROG00000036585	SALL4	100	85.161	Rhinopithecus_roxellana
ENSSSCG00000007479	SALL4	100	84.594	ENSSBOG00000030011	SALL4	100	86.207	Saimiri_boliviensis_boliviensis
ENSSSCG00000007479	SALL4	98	68.246	ENSSHAG00000018013	SALL4	88	68.246	Sarcophilus_harrisii
ENSSSCG00000007479	SALL4	100	43.684	ENSSFOG00015021075	sall4	100	44.221	Scleropages_formosus
ENSSSCG00000007479	SALL4	100	42.361	ENSSMAG00000019218	sall4	99	42.795	Scophthalmus_maximus
ENSSSCG00000007479	SALL4	100	42.969	ENSSDUG00000004657	sall4	100	43.679	Seriola_dumerili
ENSSSCG00000007479	SALL4	100	43.192	ENSSLDG00000004973	sall4	100	43.030	Seriola_lalandi_dorsalis
ENSSSCG00000007479	SALL4	100	41.862	ENSSPAG00000001978	sall4	100	42.507	Stegastes_partitus
ENSSSCG00000007479	SALL4	100	45.359	ENSTRUG00000007410	sall4	100	45.359	Takifugu_rubripes
ENSSSCG00000007479	SALL4	100	44.139	ENSTNIG00000012460	sall4	100	44.415	Tetraodon_nigroviridis
ENSSSCG00000007479	SALL4	96	85.277	ENSTTRG00000007753	SALL4	99	85.277	Tursiops_truncatus
ENSSSCG00000007479	SALL4	100	86.604	ENSUAMG00000010113	SALL4	100	86.604	Ursus_americanus
ENSSSCG00000007479	SALL4	96	85.211	ENSUMAG00000024274	SALL4	99	85.211	Ursus_maritimus
ENSSSCG00000007479	SALL4	100	49.070	ENSXETG00000012326	sall4	100	48.981	Xenopus_tropicalis
ENSSSCG00000007479	SALL4	100	42.091	ENSXCOG00000015467	sall4	100	42.449	Xiphophorus_couchianus
ENSSSCG00000007479	SALL4	100	41.754	ENSXMAG00000012692	sall4	100	42.105	Xiphophorus_maculatus