EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000007672 (Gene tree)
Gene ID: 100627239
Gene Symbol: POP7
Alias: RPP2|RPP20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 2640 bases
Position: chr3:8607557-8610196
Accession: 100627239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000008193	Alba	PF01918.21	3.5e-09	1	1
ENSSSCP00000046013	Alba	PF01918.21	3.5e-09	1	1
ENSSSCP00000008193	Rpp20	PF12328.8	5.7e-20	1	1
ENSSSCP00000046013	Rpp20	PF12328.8	5.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008412	POP7-201	1352	XM_013995472	ENSSSCP00000008193	140 (aa)	XP_013850926	F1RMX8
ENSSSCT00000044921	POP7-202	1690	-	ENSSSCP00000046013	140 (aa)	-	F1RMX8

Gene Model

Click here to download ENSSSCG00000007672's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007672	POP7	100	97.857	ENSG00000172336	POP7	100	97.857	Homo_sapiens
ENSSSCG00000007672	POP7	91	72.093	ENSAPOG00000015722	pop7	100	66.197	Acanthochromis_polyacanthus
ENSSSCG00000007672	POP7	94	71.429	ENSACIG00000022071	pop7	93	72.180	Amphilophus_citrinellus
ENSSSCG00000007672	POP7	91	72.093	ENSAOCG00000021222	pop7	82	72.093	Amphiprion_ocellaris
ENSSSCG00000007672	POP7	91	72.093	ENSAPEG00000018819	pop7	82	72.093	Amphiprion_percula
ENSSSCG00000007672	POP7	96	69.343	ENSATEG00000017615	pop7	88	69.343	Anabas_testudineus
ENSSSCG00000007672	POP7	100	97.143	ENSANAG00000019054	POP7	100	97.143	Aotus_nancymaae
ENSSSCG00000007672	POP7	87	74.194	ENSACLG00000018898	pop7	79	74.194	Astatotilapia_calliptera
ENSSSCG00000007672	POP7	86	76.423	ENSAMXG00000025789	pop7	84	76.423	Astyanax_mexicanus
ENSSSCG00000007672	POP7	100	97.143	ENSCJAG00000015056	POP7	100	97.143	Callithrix_jacchus
ENSSSCG00000007672	POP7	100	97.857	ENSCAFG00000014205	POP7	100	97.857	Canis_familiaris
ENSSSCG00000007672	POP7	100	97.857	ENSCAFG00020013863	POP7	100	97.857	Canis_lupus_dingo
ENSSSCG00000007672	POP7	100	97.143	ENSCHIG00000013484	POP7	100	97.143	Capra_hircus
ENSSSCG00000007672	POP7	100	95.714	ENSTSYG00000035016	POP7	100	95.714	Carlito_syrichta
ENSSSCG00000007672	POP7	100	98.571	ENSCPOG00000005767	POP7	100	98.571	Cavia_porcellus
ENSSSCG00000007672	POP7	100	97.143	ENSCCAG00000008898	POP7	100	97.143	Cebus_capucinus
ENSSSCG00000007672	POP7	100	97.143	ENSCATG00000010371	POP7	100	97.143	Cercocebus_atys
ENSSSCG00000007672	POP7	100	98.571	ENSCLAG00000001541	POP7	100	98.571	Chinchilla_lanigera
ENSSSCG00000007672	POP7	100	97.143	ENSCSAG00000017937	POP7	100	97.143	Chlorocebus_sabaeus
ENSSSCG00000007672	POP7	100	97.857	ENSCANG00000000652	POP7	100	97.857	Colobus_angolensis_palliatus
ENSSSCG00000007672	POP7	100	96.429	ENSCGRG00001010593	Pop7	100	96.429	Cricetulus_griseus_chok1gshd
ENSSSCG00000007672	POP7	100	96.429	ENSCGRG00000019940	Pop7	100	96.429	Cricetulus_griseus_crigri
ENSSSCG00000007672	POP7	91	72.093	ENSCSEG00000013197	pop7	96	72.093	Cynoglossus_semilaevis
ENSSSCG00000007672	POP7	94	69.403	ENSCVAG00000016728	pop7	85	69.403	Cyprinodon_variegatus
ENSSSCG00000007672	POP7	95	68.889	ENSDARG00000036394	pop7	86	68.889	Danio_rerio
ENSSSCG00000007672	POP7	100	97.857	ENSDNOG00000031207	POP7	64	97.857	Dasypus_novemcinctus
ENSSSCG00000007672	POP7	100	95.714	ENSDORG00000012512	Pop7	100	95.714	Dipodomys_ordii
ENSSSCG00000007672	POP7	79	43.966	FBgn0066304	Rpp20	66	43.966	Drosophila_melanogaster
ENSSSCG00000007672	POP7	100	92.143	ENSETEG00000007941	POP7	100	92.143	Echinops_telfairi
ENSSSCG00000007672	POP7	100	98.571	ENSEASG00005016994	POP7	100	98.571	Equus_asinus_asinus
ENSSSCG00000007672	POP7	100	98.571	ENSECAG00000010383	POP7	100	98.571	Equus_caballus
ENSSSCG00000007672	POP7	83	70.339	ENSELUG00000023947	pop7	88	70.339	Esox_lucius
ENSSSCG00000007672	POP7	100	97.857	ENSFCAG00000006849	POP7	100	97.857	Felis_catus
ENSSSCG00000007672	POP7	100	99.286	ENSFDAG00000018839	POP7	100	99.286	Fukomys_damarensis
ENSSSCG00000007672	POP7	94	70.677	ENSFHEG00000012595	pop7	85	70.677	Fundulus_heteroclitus
ENSSSCG00000007672	POP7	91	72.093	ENSGAFG00000017633	pop7	82	72.093	Gambusia_affinis
ENSSSCG00000007672	POP7	88	74.400	ENSGACG00000019931	pop7	79	74.400	Gasterosteus_aculeatus
ENSSSCG00000007672	POP7	100	97.857	ENSGGOG00000016492	POP7	100	97.857	Gorilla_gorilla
ENSSSCG00000007672	POP7	87	70.968	ENSHBUG00000011987	pop7	90	70.968	Haplochromis_burtoni
ENSSSCG00000007672	POP7	100	97.857	ENSHGLG00000018118	POP7	100	97.857	Heterocephalus_glaber_female
ENSSSCG00000007672	POP7	100	97.857	ENSHGLG00100007908	POP7	100	97.857	Heterocephalus_glaber_male
ENSSSCG00000007672	POP7	90	73.438	ENSHCOG00000010137	pop7	82	73.438	Hippocampus_comes
ENSSSCG00000007672	POP7	87	73.387	ENSIPUG00000000411	pop7	79	73.387	Ictalurus_punctatus
ENSSSCG00000007672	POP7	100	98.571	ENSSTOG00000030883	POP7	100	98.571	Ictidomys_tridecemlineatus
ENSSSCG00000007672	POP7	100	98.571	ENSJJAG00000003989	Pop7	100	98.571	Jaculus_jaculus
ENSSSCG00000007672	POP7	91	72.093	ENSKMAG00000010696	pop7	82	72.093	Kryptolebias_marmoratus
ENSSSCG00000007672	POP7	91	71.318	ENSLBEG00000003483	pop7	89	71.318	Labrus_bergylta
ENSSSCG00000007672	POP7	86	72.358	ENSLBEG00000008621	pop7	77	72.358	Labrus_bergylta
ENSSSCG00000007672	POP7	100	72.603	ENSLACG00000010203	POP7	100	72.603	Latimeria_chalumnae
ENSSSCG00000007672	POP7	91	74.219	ENSLOCG00000017553	pop7	83	76.562	Lepisosteus_oculatus
ENSSSCG00000007672	POP7	100	92.857	ENSLAFG00000030032	POP7	100	92.857	Loxodonta_africana
ENSSSCG00000007672	POP7	100	97.143	ENSMFAG00000027783	POP7	100	97.143	Macaca_fascicularis
ENSSSCG00000007672	POP7	100	97.143	ENSMMUG00000008581	POP7	100	97.143	Macaca_mulatta
ENSSSCG00000007672	POP7	100	97.143	ENSMNEG00000037495	POP7	100	97.143	Macaca_nemestrina
ENSSSCG00000007672	POP7	100	97.143	ENSMLEG00000027597	POP7	100	97.143	Mandrillus_leucophaeus
ENSSSCG00000007672	POP7	99	69.286	ENSMAMG00000007258	pop7	96	69.286	Mastacembelus_armatus
ENSSSCG00000007672	POP7	95	71.111	ENSMZEG00005022194	-	88	71.111	Maylandia_zebra
ENSSSCG00000007672	POP7	87	70.968	ENSMZEG00005005138	pop7	90	70.968	Maylandia_zebra
ENSSSCG00000007672	POP7	100	92.857	ENSMAUG00000015820	Pop7	100	92.857	Mesocricetus_auratus
ENSSSCG00000007672	POP7	100	99.286	ENSMICG00000009398	POP7	100	99.286	Microcebus_murinus
ENSSSCG00000007672	POP7	100	97.143	ENSMOCG00000013694	Pop7	100	97.143	Microtus_ochrogaster
ENSSSCG00000007672	POP7	91	69.767	ENSMMOG00000014095	pop7	90	72.093	Mola_mola
ENSSSCG00000007672	POP7	100	88.028	ENSMODG00000023662	POP7	100	90.845	Monodelphis_domestica
ENSSSCG00000007672	POP7	87	74.194	ENSMALG00000011180	pop7	92	74.194	Monopterus_albus
ENSSSCG00000007672	POP7	100	96.429	MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	Mus_caroli
ENSSSCG00000007672	POP7	100	96.429	ENSMUSG00000029715	Pop7	100	96.429	Mus_musculus
ENSSSCG00000007672	POP7	100	97.857	MGP_PahariEiJ_G0024462	Pop7	100	97.857	Mus_pahari
ENSSSCG00000007672	POP7	100	96.429	MGP_SPRETEiJ_G0028881	Pop7	100	96.429	Mus_spretus
ENSSSCG00000007672	POP7	100	96.429	ENSMPUG00000019765	POP7	100	96.429	Mustela_putorius_furo
ENSSSCG00000007672	POP7	100	95.714	ENSMLUG00000010110	POP7	100	95.714	Myotis_lucifugus
ENSSSCG00000007672	POP7	100	95.714	ENSNGAG00000021630	Pop7	100	95.714	Nannospalax_galili
ENSSSCG00000007672	POP7	87	73.387	ENSNBRG00000006286	pop7	87	73.387	Neolamprologus_brichardi
ENSSSCG00000007672	POP7	100	97.857	ENSNLEG00000011939	POP7	100	97.857	Nomascus_leucogenys
ENSSSCG00000007672	POP7	54	96.000	ENSOPRG00000015185	POP7	100	96.000	Ochotona_princeps
ENSSSCG00000007672	POP7	100	98.571	ENSODEG00000020363	POP7	100	98.571	Octodon_degus
ENSSSCG00000007672	POP7	100	83.571	ENSOANG00000001658	POP7	100	83.571	Ornithorhynchus_anatinus
ENSSSCG00000007672	POP7	100	97.857	ENSOCUG00000007818	POP7	100	97.857	Oryctolagus_cuniculus
ENSSSCG00000007672	POP7	89	74.016	ENSORLG00000003594	pop7	88	74.016	Oryzias_latipes
ENSSSCG00000007672	POP7	94	72.932	ENSORLG00020017530	pop7	79	72.932	Oryzias_latipes_hni
ENSSSCG00000007672	POP7	99	69.718	ENSORLG00015015310	pop7	100	69.718	Oryzias_latipes_hsok
ENSSSCG00000007672	POP7	88	76.000	ENSOMEG00000003667	pop7	81	76.000	Oryzias_melastigma
ENSSSCG00000007672	POP7	100	97.857	ENSOGAG00000009340	POP7	100	97.857	Otolemur_garnettii
ENSSSCG00000007672	POP7	100	97.857	ENSPPAG00000015339	POP7	100	97.857	Pan_paniscus
ENSSSCG00000007672	POP7	100	97.857	ENSPPRG00000018408	POP7	100	97.857	Panthera_pardus
ENSSSCG00000007672	POP7	100	97.857	ENSPTIG00000005807	POP7	100	97.857	Panthera_tigris_altaica
ENSSSCG00000007672	POP7	100	97.857	ENSPTRG00000019504	POP7	100	97.857	Pan_troglodytes
ENSSSCG00000007672	POP7	100	97.857	ENSPTRG00000047460	-	100	97.857	Pan_troglodytes
ENSSSCG00000007672	POP7	100	97.143	ENSPANG00000006196	POP7	100	97.143	Papio_anubis
ENSSSCG00000007672	POP7	94	71.429	ENSPKIG00000019869	pop7	76	72.180	Paramormyrops_kingsleyae
ENSSSCG00000007672	POP7	75	71.028	ENSPSIG00000000415	POP7	92	70.968	Pelodiscus_sinensis
ENSSSCG00000007672	POP7	96	70.073	ENSPMGG00000011142	pop7	96	70.073	Periophthalmus_magnuspinnatus
ENSSSCG00000007672	POP7	100	97.143	ENSPEMG00000011583	Pop7	100	97.143	Peromyscus_maniculatus_bairdii
ENSSSCG00000007672	POP7	100	88.028	ENSPCIG00000000517	POP7	72	89.437	Phascolarctos_cinereus
ENSSSCG00000007672	POP7	91	72.093	ENSPFOG00000019976	pop7	82	72.093	Poecilia_formosa
ENSSSCG00000007672	POP7	91	72.093	ENSPLAG00000007700	pop7	82	72.093	Poecilia_latipinna
ENSSSCG00000007672	POP7	91	72.093	ENSPMEG00000010673	pop7	82	72.093	Poecilia_mexicana
ENSSSCG00000007672	POP7	91	72.093	ENSPREG00000015137	pop7	82	72.093	Poecilia_reticulata
ENSSSCG00000007672	POP7	100	97.857	ENSPPYG00000017426	POP7	100	97.857	Pongo_abelii
ENSSSCG00000007672	POP7	100	93.571	ENSPCAG00000010445	POP7	100	93.571	Procavia_capensis
ENSSSCG00000007672	POP7	100	99.286	ENSPCOG00000009302	POP7	100	99.286	Propithecus_coquereli
ENSSSCG00000007672	POP7	85	91.597	ENSPCOG00000018009	-	88	91.597	Propithecus_coquereli
ENSSSCG00000007672	POP7	87	70.968	ENSPNYG00000000975	pop7	90	70.968	Pundamilia_nyererei
ENSSSCG00000007672	POP7	87	73.387	ENSPNAG00000007206	pop7	86	73.387	Pygocentrus_nattereri
ENSSSCG00000007672	POP7	100	97.857	ENSRNOG00000025310	Pop7	100	97.857	Rattus_norvegicus
ENSSSCG00000007672	POP7	100	97.857	ENSRBIG00000002671	POP7	100	97.857	Rhinopithecus_bieti
ENSSSCG00000007672	POP7	100	98.571	ENSRROG00000028543	POP7	100	98.571	Rhinopithecus_roxellana
ENSSSCG00000007672	POP7	100	95.000	ENSSBOG00000005173	POP7	100	95.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000007672	POP7	100	87.324	ENSSHAG00000001026	POP7	100	88.732	Sarcophilus_harrisii
ENSSSCG00000007672	POP7	87	74.797	ENSSFOG00015007957	pop7	82	74.797	Scleropages_formosus
ENSSSCG00000007672	POP7	99	68.085	ENSSMAG00000015536	pop7	99	68.085	Scophthalmus_maximus
ENSSSCG00000007672	POP7	99	68.794	ENSSDUG00000022172	pop7	90	68.794	Seriola_dumerili
ENSSSCG00000007672	POP7	82	69.231	ENSSLDG00000019818	pop7	91	69.231	Seriola_lalandi_dorsalis
ENSSSCG00000007672	POP7	90	71.875	ENSSPAG00000000652	pop7	76	71.875	Stegastes_partitus
ENSSSCG00000007672	POP7	93	69.697	ENSTRUG00000023845	pop7	84	71.970	Takifugu_rubripes
ENSSSCG00000007672	POP7	99	67.857	ENSTRUG00000024340	-	99	70.000	Takifugu_rubripes
ENSSSCG00000007672	POP7	91	68.992	ENSTNIG00000001259	pop7	82	71.318	Tetraodon_nigroviridis
ENSSSCG00000007672	POP7	100	99.286	ENSTBEG00000001849	POP7	100	99.286	Tupaia_belangeri
ENSSSCG00000007672	POP7	100	97.143	ENSTTRG00000011012	POP7	100	97.143	Tursiops_truncatus
ENSSSCG00000007672	POP7	100	97.143	ENSUAMG00000028076	POP7	100	97.143	Ursus_americanus
ENSSSCG00000007672	POP7	100	97.143	ENSUMAG00000010895	POP7	100	97.143	Ursus_maritimus
ENSSSCG00000007672	POP7	100	97.857	ENSVVUG00000023472	POP7	100	97.857	Vulpes_vulpes
ENSSSCG00000007672	POP7	91	70.543	ENSXCOG00000012016	pop7	81	70.543	Xiphophorus_couchianus
ENSSSCG00000007672	POP7	91	72.093	ENSXMAG00000019746	pop7	82	72.093	Xiphophorus_maculatus