EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000007732 (Gene tree)
Gene ID: 100516003
Gene Symbol: SBDS
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 8026 bases
Position: chr3:16161429-16169454
Accession: 100516003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000008258	SBDS	PF01172.18	1.1e-32	1	1
ENSSSCP00000008258	SBDS_C	PF09377.10	5.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008477	-	2797	-	ENSSSCP00000008258	250 (aa)	-	F1RJJ3

Gene Model

Click here to download ENSSSCG00000007732's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007732	SBDS	100	99.200	ENSG00000126524	SBDS	100	99.200	Homo_sapiens
ENSSSCG00000007732	SBDS	99	83.133	ENSAPOG00000014285	sbds	100	83.133	Acanthochromis_polyacanthus
ENSSSCG00000007732	SBDS	100	98.000	ENSAMEG00000018167	SBDS	100	98.000	Ailuropoda_melanoleuca
ENSSSCG00000007732	SBDS	99	82.937	ENSACIG00000007308	sbds	100	82.937	Amphilophus_citrinellus
ENSSSCG00000007732	SBDS	99	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSSSCG00000007732	SBDS	99	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSSSCG00000007732	SBDS	99	83.534	ENSATEG00000006901	sbds	100	83.534	Anabas_testudineus
ENSSSCG00000007732	SBDS	83	98.551	ENSANAG00000037501	-	100	98.551	Aotus_nancymaae
ENSSSCG00000007732	SBDS	92	91.775	ENSANAG00000024342	-	97	91.775	Aotus_nancymaae
ENSSSCG00000007732	SBDS	99	84.337	ENSACLG00000018750	sbds	100	84.337	Astatotilapia_calliptera
ENSSSCG00000007732	SBDS	100	84.400	ENSAMXG00000005361	sbds	100	84.400	Astyanax_mexicanus
ENSSSCG00000007732	SBDS	100	98.800	ENSBTAG00000004051	SBDS	100	98.800	Bos_taurus
ENSSSCG00000007732	SBDS	98	57.317	WBGene00021063	sbds-1	97	57.317	Caenorhabditis_elegans
ENSSSCG00000007732	SBDS	100	98.000	ENSCJAG00000041007	SBDS	100	98.000	Callithrix_jacchus
ENSSSCG00000007732	SBDS	100	96.032	ENSCAFG00000010797	SBDS	100	96.032	Canis_familiaris
ENSSSCG00000007732	SBDS	100	98.400	ENSCAFG00020005357	SBDS	100	98.400	Canis_lupus_dingo
ENSSSCG00000007732	SBDS	100	99.600	ENSCHIG00000026854	SBDS	100	99.600	Capra_hircus
ENSSSCG00000007732	SBDS	100	99.200	ENSTSYG00000033822	SBDS	100	99.200	Carlito_syrichta
ENSSSCG00000007732	SBDS	66	97.561	ENSCAPG00000006634	SBDS	100	97.561	Cavia_aperea
ENSSSCG00000007732	SBDS	100	98.400	ENSCPOG00000036143	SBDS	100	98.400	Cavia_porcellus
ENSSSCG00000007732	SBDS	100	98.800	ENSCCAG00000020671	SBDS	100	98.800	Cebus_capucinus
ENSSSCG00000007732	SBDS	100	99.200	ENSCATG00000039026	SBDS	100	99.200	Cercocebus_atys
ENSSSCG00000007732	SBDS	100	98.000	ENSCLAG00000005721	-	100	98.000	Chinchilla_lanigera
ENSSSCG00000007732	SBDS	99	70.968	ENSCLAG00000002113	-	99	70.968	Chinchilla_lanigera
ENSSSCG00000007732	SBDS	100	99.200	ENSCSAG00000018275	SBDS	100	99.200	Chlorocebus_sabaeus
ENSSSCG00000007732	SBDS	100	94.000	ENSCHOG00000003795	SBDS	100	94.000	Choloepus_hoffmanni
ENSSSCG00000007732	SBDS	100	90.000	ENSCPBG00000014893	SBDS	100	90.000	Chrysemys_picta_bellii
ENSSSCG00000007732	SBDS	99	66.800	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSSSCG00000007732	SBDS	100	98.800	ENSCANG00000032368	SBDS	100	98.800	Colobus_angolensis_palliatus
ENSSSCG00000007732	SBDS	66	95.122	ENSCGRG00001019886	Sbds	100	95.122	Cricetulus_griseus_chok1gshd
ENSSSCG00000007732	SBDS	83	96.135	ENSCGRG00000009211	Sbds	100	96.135	Cricetulus_griseus_crigri
ENSSSCG00000007732	SBDS	99	81.526	ENSCSEG00000005798	sbds	100	81.526	Cynoglossus_semilaevis
ENSSSCG00000007732	SBDS	99	81.928	ENSCVAG00000001053	sbds	100	81.928	Cyprinodon_variegatus
ENSSSCG00000007732	SBDS	100	84.000	ENSDARG00000027803	sbds	100	84.000	Danio_rerio
ENSSSCG00000007732	SBDS	100	98.000	ENSDNOG00000041174	SBDS	100	98.000	Dasypus_novemcinctus
ENSSSCG00000007732	SBDS	100	96.000	ENSDORG00000026218	Sbds	100	96.000	Dipodomys_ordii
ENSSSCG00000007732	SBDS	90	58.772	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSSSCG00000007732	SBDS	93	58.369	ENSEBUG00000015780	sbds	100	58.369	Eptatretus_burgeri
ENSSSCG00000007732	SBDS	100	98.800	ENSEASG00005008821	SBDS	100	98.800	Equus_asinus_asinus
ENSSSCG00000007732	SBDS	100	98.800	ENSECAG00000008202	SBDS	100	98.800	Equus_caballus
ENSSSCG00000007732	SBDS	83	75.962	ENSEEUG00000004768	SBDS	100	75.962	Erinaceus_europaeus
ENSSSCG00000007732	SBDS	100	82.400	ENSELUG00000008382	sbds	100	82.400	Esox_lucius
ENSSSCG00000007732	SBDS	100	98.400	ENSFCAG00000022142	SBDS	100	98.400	Felis_catus
ENSSSCG00000007732	SBDS	100	89.600	ENSFALG00000013808	SBDS	100	89.600	Ficedula_albicollis
ENSSSCG00000007732	SBDS	100	98.400	ENSFDAG00000018947	-	100	98.400	Fukomys_damarensis
ENSSSCG00000007732	SBDS	99	78.715	ENSFHEG00000000708	sbds	100	78.715	Fundulus_heteroclitus
ENSSSCG00000007732	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSSSCG00000007732	SBDS	100	89.600	ENSGALG00000027989	SBDS	100	89.600	Gallus_gallus
ENSSSCG00000007732	SBDS	92	78.696	ENSGAFG00000014204	sbds	100	78.696	Gambusia_affinis
ENSSSCG00000007732	SBDS	99	82.329	ENSGACG00000012697	sbds	100	82.329	Gasterosteus_aculeatus
ENSSSCG00000007732	SBDS	86	90.187	ENSGAGG00000022402	SBDS	100	90.187	Gopherus_agassizii
ENSSSCG00000007732	SBDS	96	78.838	ENSGGOG00000040023	-	92	78.838	Gorilla_gorilla
ENSSSCG00000007732	SBDS	99	84.337	ENSHBUG00000002660	sbds	100	84.337	Haplochromis_burtoni
ENSSSCG00000007732	SBDS	100	96.800	ENSHGLG00000009671	SBDS	100	96.800	Heterocephalus_glaber_female
ENSSSCG00000007732	SBDS	100	96.800	ENSHGLG00100011332	SBDS	100	96.800	Heterocephalus_glaber_male
ENSSSCG00000007732	SBDS	99	81.526	ENSHCOG00000018606	sbds	100	81.526	Hippocampus_comes
ENSSSCG00000007732	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSSSCG00000007732	SBDS	100	69.960	ENSJJAG00000003934	-	100	69.960	Jaculus_jaculus
ENSSSCG00000007732	SBDS	100	94.400	ENSJJAG00000012033	-	100	94.400	Jaculus_jaculus
ENSSSCG00000007732	SBDS	99	83.534	ENSKMAG00000018542	sbds	100	83.534	Kryptolebias_marmoratus
ENSSSCG00000007732	SBDS	99	80.723	ENSLBEG00000016687	sbds	100	80.723	Labrus_bergylta
ENSSSCG00000007732	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSSSCG00000007732	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSSSCG00000007732	SBDS	100	97.200	ENSLAFG00000008763	SBDS	100	97.200	Loxodonta_africana
ENSSSCG00000007732	SBDS	100	99.200	ENSMFAG00000032620	SBDS	100	99.200	Macaca_fascicularis
ENSSSCG00000007732	SBDS	100	99.200	ENSMMUG00000045653	SBDS	100	99.200	Macaca_mulatta
ENSSSCG00000007732	SBDS	100	99.200	ENSMNEG00000031523	SBDS	100	99.200	Macaca_nemestrina
ENSSSCG00000007732	SBDS	100	74.803	ENSMLEG00000036826	SBDS	100	74.803	Mandrillus_leucophaeus
ENSSSCG00000007732	SBDS	99	83.133	ENSMAMG00000016062	sbds	100	83.133	Mastacembelus_armatus
ENSSSCG00000007732	SBDS	99	84.337	ENSMZEG00005024385	sbds	100	84.337	Maylandia_zebra
ENSSSCG00000007732	SBDS	100	89.600	ENSMGAG00000002119	SBDS	100	89.600	Meleagris_gallopavo
ENSSSCG00000007732	SBDS	99	76.707	ENSMAUG00000022214	-	100	76.707	Mesocricetus_auratus
ENSSSCG00000007732	SBDS	100	99.200	ENSMICG00000014366	SBDS	100	99.200	Microcebus_murinus
ENSSSCG00000007732	SBDS	100	97.600	ENSMOCG00000011739	Sbds	100	97.600	Microtus_ochrogaster
ENSSSCG00000007732	SBDS	99	73.600	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSSSCG00000007732	SBDS	100	97.200	ENSMODG00000006644	SBDS	100	97.200	Monodelphis_domestica
ENSSSCG00000007732	SBDS	99	83.133	ENSMALG00000010219	sbds	100	83.133	Monopterus_albus
ENSSSCG00000007732	SBDS	100	97.600	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSSSCG00000007732	SBDS	100	97.200	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSSSCG00000007732	SBDS	100	97.200	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSSSCG00000007732	SBDS	100	97.200	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSSSCG00000007732	SBDS	67	92.857	ENSMPUG00000016192	SBDS	97	92.857	Mustela_putorius_furo
ENSSSCG00000007732	SBDS	73	96.154	ENSMLUG00000013575	SBDS	100	96.154	Myotis_lucifugus
ENSSSCG00000007732	SBDS	100	97.600	ENSNGAG00000012093	Sbds	100	97.600	Nannospalax_galili
ENSSSCG00000007732	SBDS	99	84.337	ENSNBRG00000017027	sbds	100	84.337	Neolamprologus_brichardi
ENSSSCG00000007732	SBDS	100	99.200	ENSNLEG00000013288	SBDS	100	99.200	Nomascus_leucogenys
ENSSSCG00000007732	SBDS	100	95.200	ENSOPRG00000008721	SBDS	100	95.200	Ochotona_princeps
ENSSSCG00000007732	SBDS	100	88.000	ENSODEG00000019253	-	84	88.000	Octodon_degus
ENSSSCG00000007732	SBDS	99	72.289	ENSODEG00000000137	-	85	75.600	Octodon_degus
ENSSSCG00000007732	SBDS	99	77.108	ENSODEG00000001116	-	99	77.108	Octodon_degus
ENSSSCG00000007732	SBDS	99	83.534	ENSONIG00000005874	sbds	100	83.534	Oreochromis_niloticus
ENSSSCG00000007732	SBDS	83	92.754	ENSOANG00000007674	-	100	92.754	Ornithorhynchus_anatinus
ENSSSCG00000007732	SBDS	100	96.800	ENSOCUG00000003170	SBDS	100	96.800	Oryctolagus_cuniculus
ENSSSCG00000007732	SBDS	99	80.723	ENSORLG00000023489	sbds	100	80.723	Oryzias_latipes
ENSSSCG00000007732	SBDS	99	80.321	ENSORLG00020019282	sbds	100	80.321	Oryzias_latipes_hni
ENSSSCG00000007732	SBDS	99	80.321	ENSORLG00015008005	sbds	100	80.321	Oryzias_latipes_hsok
ENSSSCG00000007732	SBDS	99	81.124	ENSOMEG00000022747	sbds	100	81.124	Oryzias_melastigma
ENSSSCG00000007732	SBDS	100	82.800	ENSOGAG00000015036	-	100	82.800	Otolemur_garnettii
ENSSSCG00000007732	SBDS	100	99.200	ENSOGAG00000009011	-	100	99.200	Otolemur_garnettii
ENSSSCG00000007732	SBDS	100	99.600	ENSOARG00000010609	SBDS	100	99.600	Ovis_aries
ENSSSCG00000007732	SBDS	100	98.400	ENSPPAG00000043889	-	100	98.400	Pan_paniscus
ENSSSCG00000007732	SBDS	100	98.400	ENSPPRG00000002307	SBDS	100	98.400	Panthera_pardus
ENSSSCG00000007732	SBDS	100	98.400	ENSPTIG00000021308	SBDS	100	98.400	Panthera_tigris_altaica
ENSSSCG00000007732	SBDS	100	99.200	ENSPTRG00000019254	SBDS	100	99.200	Pan_troglodytes
ENSSSCG00000007732	SBDS	100	84.400	ENSPTRG00000050835	-	100	84.400	Pan_troglodytes
ENSSSCG00000007732	SBDS	100	84.000	ENSPTRG00000047744	-	100	84.000	Pan_troglodytes
ENSSSCG00000007732	SBDS	87	96.313	ENSPTRG00000048174	-	96	96.313	Pan_troglodytes
ENSSSCG00000007732	SBDS	100	98.800	ENSPANG00000004078	SBDS	100	98.800	Papio_anubis
ENSSSCG00000007732	SBDS	100	84.400	ENSPKIG00000006489	sbds	100	84.400	Paramormyrops_kingsleyae
ENSSSCG00000007732	SBDS	83	90.821	ENSPSIG00000014603	SBDS	99	90.821	Pelodiscus_sinensis
ENSSSCG00000007732	SBDS	99	81.928	ENSPMGG00000004246	sbds	100	81.928	Periophthalmus_magnuspinnatus
ENSSSCG00000007732	SBDS	100	97.200	ENSPEMG00000008728	Sbds	100	97.200	Peromyscus_maniculatus_bairdii
ENSSSCG00000007732	SBDS	100	96.000	ENSPCIG00000029718	SBDS	100	96.000	Phascolarctos_cinereus
ENSSSCG00000007732	SBDS	99	81.124	ENSPFOG00000015837	sbds	100	81.124	Poecilia_formosa
ENSSSCG00000007732	SBDS	99	81.124	ENSPLAG00000003641	sbds	100	81.124	Poecilia_latipinna
ENSSSCG00000007732	SBDS	99	81.124	ENSPMEG00000019483	sbds	100	81.124	Poecilia_mexicana
ENSSSCG00000007732	SBDS	99	80.723	ENSPREG00000018758	sbds	100	80.723	Poecilia_reticulata
ENSSSCG00000007732	SBDS	100	99.200	ENSPPYG00000017513	SBDS	100	99.200	Pongo_abelii
ENSSSCG00000007732	SBDS	100	98.800	ENSPCOG00000021098	SBDS	100	98.800	Propithecus_coquereli
ENSSSCG00000007732	SBDS	100	98.400	ENSPVAG00000009369	SBDS	100	98.400	Pteropus_vampyrus
ENSSSCG00000007732	SBDS	99	83.936	ENSPNYG00000022403	sbds	100	83.936	Pundamilia_nyererei
ENSSSCG00000007732	SBDS	100	85.200	ENSPNAG00000001120	sbds	100	85.200	Pygocentrus_nattereri
ENSSSCG00000007732	SBDS	100	97.200	ENSRNOG00000000888	Sbds	100	97.200	Rattus_norvegicus
ENSSSCG00000007732	SBDS	100	99.200	ENSRBIG00000035557	SBDS	100	99.200	Rhinopithecus_bieti
ENSSSCG00000007732	SBDS	100	80.800	ENSRROG00000041986	-	100	78.800	Rhinopithecus_roxellana
ENSSSCG00000007732	SBDS	100	99.200	ENSRROG00000040842	-	100	99.200	Rhinopithecus_roxellana
ENSSSCG00000007732	SBDS	96	44.082	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSSSCG00000007732	SBDS	93	98.276	ENSSBOG00000022460	SBDS	100	98.276	Saimiri_boliviensis_boliviensis
ENSSSCG00000007732	SBDS	100	84.000	ENSSHAG00000010263	SBDS	100	84.000	Sarcophilus_harrisii
ENSSSCG00000007732	SBDS	100	85.600	ENSSFOG00015001108	sbds	100	85.600	Scleropages_formosus
ENSSSCG00000007732	SBDS	99	83.936	ENSSMAG00000020506	sbds	100	83.936	Scophthalmus_maximus
ENSSSCG00000007732	SBDS	99	82.731	ENSSDUG00000001528	sbds	100	82.731	Seriola_dumerili
ENSSSCG00000007732	SBDS	99	83.133	ENSSLDG00000003659	sbds	100	83.133	Seriola_lalandi_dorsalis
ENSSSCG00000007732	SBDS	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSSSCG00000007732	SBDS	61	98.039	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSSSCG00000007732	SBDS	100	87.200	ENSSPUG00000002699	SBDS	100	87.200	Sphenodon_punctatus
ENSSSCG00000007732	SBDS	99	83.133	ENSSPAG00000016419	sbds	100	75.600	Stegastes_partitus
ENSSSCG00000007732	SBDS	66	89.697	ENSTGUG00000003426	SBDS	99	89.697	Taeniopygia_guttata
ENSSSCG00000007732	SBDS	99	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSSSCG00000007732	SBDS	99	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSSSCG00000007732	SBDS	83	83.654	ENSTBEG00000001178	SBDS	100	83.654	Tupaia_belangeri
ENSSSCG00000007732	SBDS	100	78.800	ENSTTRG00000003921	SBDS	100	78.800	Tursiops_truncatus
ENSSSCG00000007732	SBDS	100	98.000	ENSUAMG00000001326	SBDS	100	98.000	Ursus_americanus
ENSSSCG00000007732	SBDS	100	98.000	ENSUMAG00000015353	SBDS	100	98.000	Ursus_maritimus
ENSSSCG00000007732	SBDS	100	98.400	ENSVVUG00000016478	SBDS	100	98.400	Vulpes_vulpes
ENSSSCG00000007732	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSSSCG00000007732	SBDS	99	73.896	ENSXCOG00000010639	sbds	100	73.896	Xiphophorus_couchianus
ENSSSCG00000007732	SBDS	99	81.526	ENSXMAG00000006065	sbds	100	81.526	Xiphophorus_maculatus