EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000007749 (Gene tree)
Gene ID: 100624266
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein S17
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 4484 bases
Position: chr3:16946350-16950833
Accession: 100624266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000008277	Ribosomal_S17	PF00366.20	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008496	-	914	XM_003354521	ENSSSCP00000008277	130 (aa)	XP_003354569	F1RIU0

Gene Model

Click here to download ENSSSCG00000007749's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000007749	-	100	85.385	ENSSSCG00000034769	-	91	85.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007749	-	100	86.154	ENSG00000239789	MRPS17	100	86.154	Homo_sapiens
ENSSSCG00000007749	-	98	68.939	ENSAPOG00000000295	mrps17	81	68.939	Acanthochromis_polyacanthus
ENSSSCG00000007749	-	100	88.462	ENSAMEG00000016161	-	95	88.462	Ailuropoda_melanoleuca
ENSSSCG00000007749	-	93	71.200	ENSACIG00000019454	mrps17	90	71.200	Amphilophus_citrinellus
ENSSSCG00000007749	-	98	67.424	ENSAOCG00000015138	mrps17	90	67.424	Amphiprion_ocellaris
ENSSSCG00000007749	-	98	68.182	ENSAPEG00000017481	mrps17	90	68.182	Amphiprion_percula
ENSSSCG00000007749	-	97	70.635	ENSATEG00000007899	mrps17	90	70.312	Anabas_testudineus
ENSSSCG00000007749	-	100	69.118	ENSAPLG00000010523	-	99	69.118	Anas_platyrhynchos
ENSSSCG00000007749	-	100	73.846	ENSANAG00000025061	-	100	73.846	Aotus_nancymaae
ENSSSCG00000007749	-	100	68.462	ENSANAG00000023853	-	100	68.462	Aotus_nancymaae
ENSSSCG00000007749	-	69	84.444	ENSANAG00000030302	-	80	84.444	Aotus_nancymaae
ENSSSCG00000007749	-	98	68.939	ENSACLG00000007174	mrps17	90	68.939	Astatotilapia_calliptera
ENSSSCG00000007749	-	95	72.358	ENSAMXG00000030410	mrps17	84	72.358	Astyanax_mexicanus
ENSSSCG00000007749	-	100	88.462	ENSBTAG00000007934	MRPS17	100	88.462	Bos_taurus
ENSSSCG00000007749	-	100	87.692	ENSBTAG00000023186	-	100	87.692	Bos_taurus
ENSSSCG00000007749	-	100	86.154	ENSCJAG00000021291	-	100	86.154	Callithrix_jacchus
ENSSSCG00000007749	-	100	85.385	ENSCJAG00000022938	-	100	85.385	Callithrix_jacchus
ENSSSCG00000007749	-	100	78.462	ENSCJAG00000022879	-	100	78.462	Callithrix_jacchus
ENSSSCG00000007749	-	100	90.000	ENSCAFG00000010098	-	92	90.000	Canis_familiaris
ENSSSCG00000007749	-	100	90.000	ENSCAFG00020004866	-	100	90.000	Canis_lupus_dingo
ENSSSCG00000007749	-	100	88.462	ENSCHIG00000014572	-	100	88.462	Capra_hircus
ENSSSCG00000007749	-	100	91.538	ENSTSYG00000001260	-	100	91.538	Carlito_syrichta
ENSSSCG00000007749	-	85	95.495	ENSCAPG00000006241	-	95	95.495	Cavia_aperea
ENSSSCG00000007749	-	100	86.154	ENSCCAG00000025426	-	100	86.154	Cebus_capucinus
ENSSSCG00000007749	-	100	70.000	ENSCCAG00000037194	-	100	70.000	Cebus_capucinus
ENSSSCG00000007749	-	100	69.231	ENSCATG00000030575	-	100	69.231	Cercocebus_atys
ENSSSCG00000007749	-	84	84.545	ENSCATG00000039682	-	100	84.545	Cercocebus_atys
ENSSSCG00000007749	-	100	87.692	ENSCLAG00000007650	-	100	87.692	Chinchilla_lanigera
ENSSSCG00000007749	-	100	77.692	ENSCSAG00000019470	-	100	77.692	Chlorocebus_sabaeus
ENSSSCG00000007749	-	100	86.923	ENSCSAG00000016120	-	100	86.923	Chlorocebus_sabaeus
ENSSSCG00000007749	-	100	86.923	ENSCHOG00000010576	-	100	86.923	Choloepus_hoffmanni
ENSSSCG00000007749	-	68	83.146	ENSCHOG00000013255	-	100	83.146	Choloepus_hoffmanni
ENSSSCG00000007749	-	100	71.324	ENSCPBG00000014888	-	99	71.324	Chrysemys_picta_bellii
ENSSSCG00000007749	-	100	66.923	ENSCANG00000035780	-	94	66.923	Colobus_angolensis_palliatus
ENSSSCG00000007749	-	100	86.923	ENSCANG00000030538	-	100	86.923	Colobus_angolensis_palliatus
ENSSSCG00000007749	-	100	72.308	ENSCANG00000035889	-	100	72.308	Colobus_angolensis_palliatus
ENSSSCG00000007749	-	99	83.721	ENSCGRG00001012873	Mrps17	100	83.721	Cricetulus_griseus_chok1gshd
ENSSSCG00000007749	-	96	73.228	ENSCSEG00000018563	mrps17	86	73.228	Cynoglossus_semilaevis
ENSSSCG00000007749	-	98	69.697	ENSCVAG00000006034	mrps17	90	69.697	Cyprinodon_variegatus
ENSSSCG00000007749	-	99	71.429	ENSDARG00000054164	mrps17	97	71.429	Danio_rerio
ENSSSCG00000007749	-	100	86.923	ENSDNOG00000014785	-	92	86.923	Dasypus_novemcinctus
ENSSSCG00000007749	-	74	34.375	FBgn0034986	mRpS17	62	34.375	Drosophila_melanogaster
ENSSSCG00000007749	-	83	59.259	ENSEBUG00000010858	mrps17	64	59.259	Eptatretus_burgeri
ENSSSCG00000007749	-	94	95.082	ENSEASG00005008885	-	100	95.082	Equus_asinus_asinus
ENSSSCG00000007749	-	94	95.082	ENSECAG00000012583	-	100	95.082	Equus_caballus
ENSSSCG00000007749	-	91	77.966	ENSECAG00000028191	-	97	77.966	Equus_caballus
ENSSSCG00000007749	-	98	69.118	ENSELUG00000006708	mrps17	89	69.118	Esox_lucius
ENSSSCG00000007749	-	100	90.769	ENSFCAG00000041039	-	100	90.769	Felis_catus
ENSSSCG00000007749	-	98	72.180	ENSFALG00000006796	-	90	72.180	Ficedula_albicollis
ENSSSCG00000007749	-	100	88.462	ENSFDAG00000001915	-	100	88.462	Fukomys_damarensis
ENSSSCG00000007749	-	98	67.939	ENSFHEG00000023082	mrps17	90	67.939	Fundulus_heteroclitus
ENSSSCG00000007749	-	93	68.595	ENSGMOG00000007056	mrps17	88	68.595	Gadus_morhua
ENSSSCG00000007749	-	100	71.324	ENSGALG00000002379	MRPS17	99	71.324	Gallus_gallus
ENSSSCG00000007749	-	98	67.424	ENSGAFG00000001727	mrps17	90	67.424	Gambusia_affinis
ENSSSCG00000007749	-	99	65.672	ENSGACG00000020492	mrps17	96	65.672	Gasterosteus_aculeatus
ENSSSCG00000007749	-	100	72.059	ENSGAGG00000022429	-	100	72.059	Gopherus_agassizii
ENSSSCG00000007749	-	100	72.308	ENSGGOG00000044141	-	100	72.308	Gorilla_gorilla
ENSSSCG00000007749	-	100	86.923	ENSGGOG00000039358	-	100	86.923	Gorilla_gorilla
ENSSSCG00000007749	-	98	68.939	ENSHBUG00000006127	mrps17	90	68.939	Haplochromis_burtoni
ENSSSCG00000007749	-	92	70.833	ENSHGLG00000010593	-	96	70.833	Heterocephalus_glaber_female
ENSSSCG00000007749	-	92	70.833	ENSHGLG00100012532	-	96	70.833	Heterocephalus_glaber_male
ENSSSCG00000007749	-	100	90.000	ENSHGLG00100010825	-	100	90.000	Heterocephalus_glaber_male
ENSSSCG00000007749	-	97	62.500	ENSHCOG00000009491	mrps17	92	62.500	Hippocampus_comes
ENSSSCG00000007749	-	98	68.939	ENSIPUG00000007844	MRPS17	94	68.939	Ictalurus_punctatus
ENSSSCG00000007749	-	90	72.650	ENSJJAG00000022596	-	92	72.650	Jaculus_jaculus
ENSSSCG00000007749	-	98	71.970	ENSKMAG00000006452	mrps17	90	71.970	Kryptolebias_marmoratus
ENSSSCG00000007749	-	98	66.917	ENSLBEG00000000120	mrps17	91	66.917	Labrus_bergylta
ENSSSCG00000007749	-	100	69.173	ENSLACG00000018908	mrps17	93	69.173	Latimeria_chalumnae
ENSSSCG00000007749	-	98	65.909	ENSLOCG00000004118	mrps17	92	65.909	Lepisosteus_oculatus
ENSSSCG00000007749	-	92	86.667	ENSLAFG00000027907	-	100	86.667	Loxodonta_africana
ENSSSCG00000007749	-	100	86.923	ENSMFAG00000038594	-	100	86.923	Macaca_fascicularis
ENSSSCG00000007749	-	100	77.692	ENSMMUG00000041709	-	94	77.692	Macaca_mulatta
ENSSSCG00000007749	-	100	81.538	ENSMMUG00000000585	-	76	81.538	Macaca_mulatta
ENSSSCG00000007749	-	100	86.923	ENSMNEG00000035442	-	100	86.923	Macaca_nemestrina
ENSSSCG00000007749	-	100	86.923	ENSMLEG00000040782	-	100	86.923	Mandrillus_leucophaeus
ENSSSCG00000007749	-	100	75.385	ENSMLEG00000011393	-	94	75.385	Mandrillus_leucophaeus
ENSSSCG00000007749	-	98	66.917	ENSMAMG00000020981	mrps17	90	66.917	Mastacembelus_armatus
ENSSSCG00000007749	-	98	68.939	ENSMZEG00005024876	mrps17	90	68.939	Maylandia_zebra
ENSSSCG00000007749	-	100	71.324	ENSMGAG00000004317	-	99	71.324	Meleagris_gallopavo
ENSSSCG00000007749	-	99	83.721	ENSMAUG00000021017	Mrps17	100	83.721	Mesocricetus_auratus
ENSSSCG00000007749	-	100	90.769	ENSMICG00000046806	-	100	90.769	Microcebus_murinus
ENSSSCG00000007749	-	99	80.620	ENSMOCG00000008471	-	100	80.620	Microtus_ochrogaster
ENSSSCG00000007749	-	89	78.448	ENSMOCG00000017721	-	88	78.448	Microtus_ochrogaster
ENSSSCG00000007749	-	98	67.669	ENSMMOG00000012804	mrps17	94	67.669	Mola_mola
ENSSSCG00000007749	-	99	79.070	ENSMODG00000006523	-	100	79.070	Monodelphis_domestica
ENSSSCG00000007749	-	98	69.697	ENSMALG00000018057	mrps17	90	69.697	Monopterus_albus
ENSSSCG00000007749	-	85	91.892	MGP_CAROLIEiJ_G0027784	Mrps17	100	93.103	Mus_caroli
ENSSSCG00000007749	-	85	91.892	ENSMUSG00000034211	Mrps17	100	93.103	Mus_musculus
ENSSSCG00000007749	-	85	91.892	MGP_PahariEiJ_G0024399	Mrps17	100	93.103	Mus_pahari
ENSSSCG00000007749	-	85	91.892	MGP_SPRETEiJ_G0028783	Mrps17	100	93.103	Mus_spretus
ENSSSCG00000007749	-	100	90.769	ENSMPUG00000016230	-	70	90.769	Mustela_putorius_furo
ENSSSCG00000007749	-	100	87.692	ENSMLUG00000016710	-	100	87.692	Myotis_lucifugus
ENSSSCG00000007749	-	99	86.047	ENSNGAG00000020609	Mrps17	99	86.047	Nannospalax_galili
ENSSSCG00000007749	-	98	68.182	ENSNBRG00000002238	mrps17	90	68.182	Neolamprologus_brichardi
ENSSSCG00000007749	-	100	86.923	ENSNLEG00000032290	-	100	86.923	Nomascus_leucogenys
ENSSSCG00000007749	-	88	85.965	ENSMEUG00000005143	-	88	85.965	Notamacropus_eugenii
ENSSSCG00000007749	-	98	85.156	ENSOPRG00000009945	-	100	85.156	Ochotona_princeps
ENSSSCG00000007749	-	85	81.982	ENSODEG00000014911	-	99	81.982	Octodon_degus
ENSSSCG00000007749	-	100	66.154	ENSODEG00000006408	-	100	66.154	Octodon_degus
ENSSSCG00000007749	-	100	72.308	ENSODEG00000004346	-	100	72.308	Octodon_degus
ENSSSCG00000007749	-	100	82.308	ENSODEG00000017232	-	100	82.308	Octodon_degus
ENSSSCG00000007749	-	78	85.294	ENSODEG00000015145	-	100	85.294	Octodon_degus
ENSSSCG00000007749	-	100	85.385	ENSODEG00000018639	-	100	85.385	Octodon_degus
ENSSSCG00000007749	-	98	68.939	ENSONIG00000008746	mrps17	90	68.939	Oreochromis_niloticus
ENSSSCG00000007749	-	100	90.769	ENSOCUG00000001767	-	95	90.769	Oryctolagus_cuniculus
ENSSSCG00000007749	-	100	90.769	ENSOCUG00000024077	-	100	90.769	Oryctolagus_cuniculus
ENSSSCG00000007749	-	100	90.769	ENSOCUG00000027419	-	100	90.769	Oryctolagus_cuniculus
ENSSSCG00000007749	-	99	70.677	ENSORLG00000002795	mrps17	90	70.677	Oryzias_latipes
ENSSSCG00000007749	-	99	70.677	ENSORLG00020016792	mrps17	90	70.677	Oryzias_latipes_hni
ENSSSCG00000007749	-	99	70.677	ENSORLG00015001149	mrps17	90	70.677	Oryzias_latipes_hsok
ENSSSCG00000007749	-	96	75.200	ENSOMEG00000009095	mrps17	92	72.519	Oryzias_melastigma
ENSSSCG00000007749	-	100	81.538	ENSOGAG00000009088	-	100	81.538	Otolemur_garnettii
ENSSSCG00000007749	-	100	90.000	ENSOGAG00000010486	-	100	90.000	Otolemur_garnettii
ENSSSCG00000007749	-	100	87.692	ENSOARG00000009925	-	88	87.692	Ovis_aries
ENSSSCG00000007749	-	100	71.538	ENSPPAG00000038238	-	100	71.538	Pan_paniscus
ENSSSCG00000007749	-	100	86.923	ENSPPAG00000036712	-	100	86.923	Pan_paniscus
ENSSSCG00000007749	-	100	90.769	ENSPPRG00000000525	-	100	90.769	Panthera_pardus
ENSSSCG00000007749	-	100	90.769	ENSPTIG00000019404	-	82	90.769	Panthera_tigris_altaica
ENSSSCG00000007749	-	100	86.923	ENSPTRG00000019203	MRPS17	100	86.923	Pan_troglodytes
ENSSSCG00000007749	-	100	82.308	ENSPTRG00000046133	-	94	82.308	Pan_troglodytes
ENSSSCG00000007749	-	100	86.923	ENSPTRG00000043904	-	100	86.923	Pan_troglodytes
ENSSSCG00000007749	-	100	73.077	ENSPTRG00000048604	-	100	73.077	Pan_troglodytes
ENSSSCG00000007749	-	100	80.000	ENSPTRG00000051838	-	100	80.000	Pan_troglodytes
ENSSSCG00000007749	-	100	86.923	ENSPANG00000015285	-	100	86.923	Papio_anubis
ENSSSCG00000007749	-	89	66.379	ENSPANG00000030519	-	100	66.379	Papio_anubis
ENSSSCG00000007749	-	97	63.566	ENSPKIG00000018389	mrps17	94	63.566	Paramormyrops_kingsleyae
ENSSSCG00000007749	-	100	72.794	ENSPSIG00000013261	-	99	72.794	Pelodiscus_sinensis
ENSSSCG00000007749	-	83	66.667	ENSPMAG00000006299	mrps17	70	66.667	Petromyzon_marinus
ENSSSCG00000007749	-	97	65.385	ENSPFOG00000010719	mrps17	90	65.152	Poecilia_formosa
ENSSSCG00000007749	-	97	65.385	ENSPLAG00000018054	mrps17	90	65.152	Poecilia_latipinna
ENSSSCG00000007749	-	97	65.385	ENSPMEG00000014029	mrps17	90	65.152	Poecilia_mexicana
ENSSSCG00000007749	-	98	64.394	ENSPREG00000009010	mrps17	92	64.394	Poecilia_reticulata
ENSSSCG00000007749	-	100	86.923	ENSPPYG00000017547	-	100	86.923	Pongo_abelii
ENSSSCG00000007749	-	100	90.000	ENSPCOG00000013668	-	100	90.000	Propithecus_coquereli
ENSSSCG00000007749	-	84	79.817	ENSPCOG00000000608	-	92	79.817	Propithecus_coquereli
ENSSSCG00000007749	-	100	91.538	ENSPVAG00000006305	-	99	91.538	Pteropus_vampyrus
ENSSSCG00000007749	-	98	68.939	ENSPNYG00000018693	mrps17	90	68.939	Pundamilia_nyererei
ENSSSCG00000007749	-	97	73.077	ENSPNAG00000015336	mrps17	80	72.180	Pygocentrus_nattereri
ENSSSCG00000007749	-	98	83.465	ENSRNOG00000000926	Mrps17	100	83.465	Rattus_norvegicus
ENSSSCG00000007749	-	85	83.784	ENSRNOG00000030847	AABR07012868.1	77	83.784	Rattus_norvegicus
ENSSSCG00000007749	-	92	88.235	ENSRBIG00000032061	-	100	88.235	Rhinopithecus_bieti
ENSSSCG00000007749	-	98	88.281	ENSRBIG00000032287	-	99	88.281	Rhinopithecus_bieti
ENSSSCG00000007749	-	98	87.500	ENSRROG00000021955	-	99	87.500	Rhinopithecus_roxellana
ENSSSCG00000007749	-	100	87.692	ENSRROG00000000039	-	100	87.692	Rhinopithecus_roxellana
ENSSSCG00000007749	-	100	66.154	ENSSBOG00000030322	-	100	66.154	Saimiri_boliviensis_boliviensis
ENSSSCG00000007749	-	100	86.154	ENSSBOG00000025889	-	100	86.154	Saimiri_boliviensis_boliviensis
ENSSSCG00000007749	-	98	74.016	ENSSBOG00000003355	-	98	74.016	Saimiri_boliviensis_boliviensis
ENSSSCG00000007749	-	98	79.688	ENSSHAG00000009749	-	99	79.688	Sarcophilus_harrisii
ENSSSCG00000007749	-	99	63.636	ENSSFOG00015006180	mrps17	92	63.636	Scleropages_formosus
ENSSSCG00000007749	-	98	68.421	ENSSMAG00000001680	mrps17	89	68.421	Scophthalmus_maximus
ENSSSCG00000007749	-	98	68.421	ENSSDUG00000017736	mrps17	90	68.421	Seriola_dumerili
ENSSSCG00000007749	-	98	68.421	ENSSLDG00000015517	mrps17	90	68.421	Seriola_lalandi_dorsalis
ENSSSCG00000007749	-	100	69.853	ENSSPUG00000002623	-	99	69.853	Sphenodon_punctatus
ENSSSCG00000007749	-	99	64.662	ENSSPAG00000008641	mrps17	90	64.662	Stegastes_partitus
ENSSSCG00000007749	-	100	71.324	ENSTGUG00000005052	MRPS17	99	71.324	Taeniopygia_guttata
ENSSSCG00000007749	-	97	68.702	ENSTRUG00000024068	mrps17	90	68.421	Takifugu_rubripes
ENSSSCG00000007749	-	98	68.421	ENSTNIG00000016121	mrps17	90	68.421	Tetraodon_nigroviridis
ENSSSCG00000007749	-	68	88.636	ENSTBEG00000007385	-	100	88.636	Tupaia_belangeri
ENSSSCG00000007749	-	100	93.077	ENSTTRG00000015139	-	100	93.077	Tursiops_truncatus
ENSSSCG00000007749	-	100	90.769	ENSUAMG00000002970	-	100	90.769	Ursus_americanus
ENSSSCG00000007749	-	100	89.231	ENSUMAG00000015822	-	100	89.231	Ursus_maritimus
ENSSSCG00000007749	-	100	90.769	ENSVVUG00000016664	-	100	90.769	Vulpes_vulpes
ENSSSCG00000007749	-	99	68.182	ENSXETG00000010088	mrps17	94	68.182	Xenopus_tropicalis
ENSSSCG00000007749	-	85	75.676	ENSXCOG00000009153	mrps17	86	75.676	Xiphophorus_couchianus
ENSSSCG00000007749	-	97	66.923	ENSXMAG00000007366	mrps17	90	66.667	Xiphophorus_maculatus