EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000007800 (Gene tree)
Gene ID: 100514708
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 16607 bases
Position: chr3:17924651-17941257
Accession: 100514708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000008329	MMR_HSR1	PF01926.23	3.7e-08	1	1
ENSSSCP00000051223	MMR_HSR1	PF01926.23	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000008548	SEPT1-201	1569	XM_021085671	ENSSSCP00000008329	366 (aa)	XP_020941330	F1RG60
ENSSSCT00000059906	SEPT1-202	4715	-	ENSSSCP00000051223	366 (aa)	-	F1RG60

Gene Model

Click here to download ENSSSCG00000007800's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000007800	SEPT1	97	64.903	ENSSSCG00000017643	SEPT4	92	65.714
ENSSSCG00000007800	SEPT1	94	56.105	ENSSSCG00000016370	SEPT2	89	56.105
ENSSSCG00000007800	SEPT1	80	43.729	ENSSSCG00000017168	SEPT9	79	43.729
ENSSSCG00000007800	SEPT1	79	46.918	ENSSSCG00000000040	SEPT3	81	46.918
ENSSSCG00000007800	SEPT1	93	60.472	ENSSSCG00000010128	-	93	58.421
ENSSSCG00000007800	SEPT1	92	40.351	ENSSSCG00000008986	SEPT11	76	40.936
ENSSSCG00000007800	SEPT1	80	42.034	ENSSSCG00000014285	SEPT8	82	37.950
ENSSSCG00000007800	SEPT1	90	50.000	ENSSSCG00000016661	SEPT7	80	46.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007800	SEPT1	100	96.730	ENSG00000180096	SEPT1	89	96.730	Homo_sapiens
ENSSSCG00000007800	SEPT1	99	95.368	ENSAMEG00000007865	SEPT1	95	95.989	Ailuropoda_melanoleuca
ENSSSCG00000007800	SEPT1	100	95.913	ENSANAG00000029084	SEPT1	100	95.913	Aotus_nancymaae
ENSSSCG00000007800	SEPT1	100	97.275	ENSBTAG00000021219	SEPT1	100	97.275	Bos_taurus
ENSSSCG00000007800	SEPT1	100	94.823	ENSCJAG00000002577	SEPT1	89	94.823	Callithrix_jacchus
ENSSSCG00000007800	SEPT1	99	97.268	ENSCAFG00000016576	SEPT1	99	97.268	Canis_familiaris
ENSSSCG00000007800	SEPT1	99	97.268	ENSCAFG00020017813	SEPT1	99	97.268	Canis_lupus_dingo
ENSSSCG00000007800	SEPT1	100	94.400	ENSCHIG00000017447	SEPT1	100	94.400	Capra_hircus
ENSSSCG00000007800	SEPT1	100	95.640	ENSTSYG00000035596	SEPT1	100	95.640	Carlito_syrichta
ENSSSCG00000007800	SEPT1	100	74.185	ENSCAPG00000001347	SEPT1	94	74.000	Cavia_aperea
ENSSSCG00000007800	SEPT1	99	92.098	ENSCPOG00000003088	SEPT1	95	92.837	Cavia_porcellus
ENSSSCG00000007800	SEPT1	100	82.561	ENSCCAG00000030164	SEPT1	90	82.561	Cebus_capucinus
ENSSSCG00000007800	SEPT1	100	96.458	ENSCATG00000037250	SEPT1	99	96.458	Cercocebus_atys
ENSSSCG00000007800	SEPT1	99	94.005	ENSCLAG00000010486	SEPT1	95	94.720	Chinchilla_lanigera
ENSSSCG00000007800	SEPT1	100	96.458	ENSCSAG00000006056	SEPT1	99	96.458	Chlorocebus_sabaeus
ENSSSCG00000007800	SEPT1	100	96.185	ENSCANG00000035786	SEPT1	89	96.185	Colobus_angolensis_palliatus
ENSSSCG00000007800	SEPT1	100	94.550	ENSCGRG00001003374	Sept1	100	94.550	Cricetulus_griseus_chok1gshd
ENSSSCG00000007800	SEPT1	100	93.733	ENSCGRG00000004919	Sept1	100	93.733	Cricetulus_griseus_crigri
ENSSSCG00000007800	SEPT1	100	95.640	ENSDNOG00000014680	SEPT1	81	96.275	Dasypus_novemcinctus
ENSSSCG00000007800	SEPT1	100	95.640	ENSDORG00000011443	Sept1	100	95.640	Dipodomys_ordii
ENSSSCG00000007800	SEPT1	92	96.755	ENSEASG00005013153	SEPT1	100	96.755	Equus_asinus_asinus
ENSSSCG00000007800	SEPT1	100	97.003	ENSECAG00000009390	SEPT1	96	97.003	Equus_caballus
ENSSSCG00000007800	SEPT1	100	94.550	ENSEEUG00000007661	SEPT1	100	94.550	Erinaceus_europaeus
ENSSSCG00000007800	SEPT1	100	97.275	ENSFCAG00000013541	SEPT1	94	97.275	Felis_catus
ENSSSCG00000007800	SEPT1	100	74.866	ENSGGOG00000017024	SEPT1	88	74.866	Gorilla_gorilla
ENSSSCG00000007800	SEPT1	100	97.003	ENSSTOG00000002782	SEPT1	100	97.003	Ictidomys_tridecemlineatus
ENSSSCG00000007800	SEPT1	100	94.823	ENSJJAG00000023131	Sept1	95	95.415	Jaculus_jaculus
ENSSSCG00000007800	SEPT1	99	95.628	ENSLAFG00000027789	SEPT1	95	95.977	Loxodonta_africana
ENSSSCG00000007800	SEPT1	100	96.458	ENSMFAG00000031504	SEPT1	89	96.458	Macaca_fascicularis
ENSSSCG00000007800	SEPT1	100	89.918	ENSMMUG00000021842	SEPT1	97	96.755	Macaca_mulatta
ENSSSCG00000007800	SEPT1	100	84.511	ENSMNEG00000041695	SEPT1	84	84.286	Macaca_nemestrina
ENSSSCG00000007800	SEPT1	100	87.738	ENSMLEG00000039481	SEPT1	88	87.738	Mandrillus_leucophaeus
ENSSSCG00000007800	SEPT1	100	95.640	ENSMAUG00000009531	Sept1	100	95.640	Mesocricetus_auratus
ENSSSCG00000007800	SEPT1	99	96.721	ENSMICG00000011817	SEPT1	94	96.721	Microcebus_murinus
ENSSSCG00000007800	SEPT1	100	94.823	ENSMOCG00000017518	Sept1	95	95.129	Microtus_ochrogaster
ENSSSCG00000007800	SEPT1	100	95.628	MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	Mus_caroli
ENSSSCG00000007800	SEPT1	100	95.902	ENSMUSG00000000486	Sept1	100	96.552	Mus_musculus
ENSSSCG00000007800	SEPT1	100	95.628	MGP_PahariEiJ_G0013702	Sept1	100	95.862	Mus_pahari
ENSSSCG00000007800	SEPT1	100	95.628	MGP_SPRETEiJ_G0031606	Sept1	100	95.862	Mus_spretus
ENSSSCG00000007800	SEPT1	99	95.902	ENSMLUG00000006749	SEPT1	95	96.552	Myotis_lucifugus
ENSSSCG00000007800	SEPT1	100	95.368	ENSNGAG00000021368	Sept1	100	95.368	Nannospalax_galili
ENSSSCG00000007800	SEPT1	99	89.891	ENSMEUG00000000492	SEPT1	96	90.517	Notamacropus_eugenii
ENSSSCG00000007800	SEPT1	100	92.916	ENSOPRG00000007981	SEPT1	100	92.916	Ochotona_princeps
ENSSSCG00000007800	SEPT1	100	92.663	ENSODEG00000014531	SEPT1	95	93.429	Octodon_degus
ENSSSCG00000007800	SEPT1	100	87.738	ENSOANG00000005331	SEPT1	96	88.539	Ornithorhynchus_anatinus
ENSSSCG00000007800	SEPT1	99	97.268	ENSOGAG00000013350	SEPT1	99	97.268	Otolemur_garnettii
ENSSSCG00000007800	SEPT1	99	96.467	ENSOARG00000006135	SEPT1	99	96.467	Ovis_aries
ENSSSCG00000007800	SEPT1	100	77.929	ENSPPAG00000032680	SEPT1	87	77.929	Pan_paniscus
ENSSSCG00000007800	SEPT1	99	97.268	ENSPPRG00000008648	-	100	97.268	Panthera_pardus
ENSSSCG00000007800	SEPT1	84	97.403	ENSPTIG00000006718	SEPT1	87	97.403	Panthera_tigris_altaica
ENSSSCG00000007800	SEPT1	100	96.730	ENSPTRG00000007998	SEPT1	89	96.730	Pan_troglodytes
ENSSSCG00000007800	SEPT1	100	87.738	ENSPANG00000032364	SEPT1	99	87.738	Papio_anubis
ENSSSCG00000007800	SEPT1	100	95.095	ENSPEMG00000023616	Sept1	100	95.095	Peromyscus_maniculatus_bairdii
ENSSSCG00000007800	SEPT1	100	90.736	ENSPCIG00000001537	SEPT1	96	91.404	Phascolarctos_cinereus
ENSSSCG00000007800	SEPT1	84	95.779	ENSPPYG00000007270	-	100	95.779	Pongo_abelii
ENSSSCG00000007800	SEPT1	100	94.550	ENSPCAG00000009042	SEPT1	95	95.129	Procavia_capensis
ENSSSCG00000007800	SEPT1	100	96.730	ENSPCOG00000028121	SEPT1	90	96.730	Propithecus_coquereli
ENSSSCG00000007800	SEPT1	100	98.093	ENSPVAG00000008655	SEPT1	100	98.093	Pteropus_vampyrus
ENSSSCG00000007800	SEPT1	100	95.082	ENSRNOG00000017804	Sept1	95	95.402	Rattus_norvegicus
ENSSSCG00000007800	SEPT1	100	96.185	ENSRBIG00000036580	SEPT1	89	96.185	Rhinopithecus_bieti
ENSSSCG00000007800	SEPT1	100	96.185	ENSRROG00000038708	SEPT1	99	96.185	Rhinopithecus_roxellana
ENSSSCG00000007800	SEPT1	100	95.368	ENSSBOG00000021733	SEPT1	89	95.368	Saimiri_boliviensis_boliviensis
ENSSSCG00000007800	SEPT1	99	89.589	ENSSHAG00000006478	SEPT1	94	90.202	Sarcophilus_harrisii
ENSSSCG00000007800	SEPT1	100	97.275	ENSTTRG00000017272	SEPT1	100	97.275	Tursiops_truncatus
ENSSSCG00000007800	SEPT1	100	97.548	ENSUAMG00000027438	SEPT1	99	97.275	Ursus_americanus
ENSSSCG00000007800	SEPT1	100	97.548	ENSUMAG00000011345	SEPT1	100	97.548	Ursus_maritimus
ENSSSCG00000007800	SEPT1	92	96.726	ENSVVUG00000026116	SEPT1	90	96.726	Vulpes_vulpes