EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000007830 (Gene tree)
Gene ID: 100521783
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 33059 bases
Position: chrAEMK02000510.1:847812-880870
Accession: 100521783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039311	zf-CCHC_2	PF13696.6	6.1e-09	1	1
ENSSSCP00000008359	zf-CCHC_2	PF13696.6	6.2e-09	1	1
ENSSSCP00000033098	zf-CCHC_2	PF13696.6	6.2e-09	1	1
ENSSSCP00000039311	zf-CCHC	PF00098.23	0.0001	1	1
ENSSSCP00000008359	zf-CCHC	PF00098.23	0.00011	1	1
ENSSSCP00000033098	zf-CCHC	PF00098.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000061233	RBBP6-202	5717	XM_005662074	ENSSSCP00000039311	1760 (aa)	XP_005662131	A0A287A5U1
ENSSSCT00000051079	RBBP6-201	5819	XM_003124540	ENSSSCP00000033098	1794 (aa)	XP_003124588	K9IVT3
ENSSSCT00000008580	RBBP6-203	5340	-	ENSSSCP00000008359	1779 (aa)	-	F1RFD8

Gene Model

Click here to download ENSSSCG00000007830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000007830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000007830	RBBP6	100	93.370	ENSG00000122257	RBBP6	100	98.667	Homo_sapiens
ENSSSCG00000007830	RBBP6	98	91.572	ENSAMEG00000009312	RBBP6	98	92.364	Ailuropoda_melanoleuca
ENSSSCG00000007830	RBBP6	100	92.925	ENSANAG00000037384	RBBP6	100	96.882	Aotus_nancymaae
ENSSSCG00000007830	RBBP6	100	94.108	ENSBTAG00000009441	RBBP6	67	93.278	Bos_taurus
ENSSSCG00000007830	RBBP6	100	93.090	ENSCJAG00000020661	RBBP6	100	96.882	Callithrix_jacchus
ENSSSCG00000007830	RBBP6	98	94.158	ENSCAFG00000017566	RBBP6	98	94.158	Canis_familiaris
ENSSSCG00000007830	RBBP6	100	93.719	ENSCHIG00000013732	RBBP6	68	92.614	Capra_hircus
ENSSSCG00000007830	RBBP6	100	92.813	ENSTSYG00000000822	RBBP6	100	96.759	Carlito_syrichta
ENSSSCG00000007830	RBBP6	91	88.089	ENSCAPG00000012399	RBBP6	97	88.089	Cavia_aperea
ENSSSCG00000007830	RBBP6	98	89.835	ENSCPOG00000040025	RBBP6	98	89.835	Cavia_porcellus
ENSSSCG00000007830	RBBP6	100	92.813	ENSCCAG00000023229	RBBP6	100	96.991	Cebus_capucinus
ENSSSCG00000007830	RBBP6	100	92.981	ENSCATG00000033601	RBBP6	100	96.991	Cercocebus_atys
ENSSSCG00000007830	RBBP6	98	89.519	ENSCLAG00000009872	RBBP6	98	89.722	Chinchilla_lanigera
ENSSSCG00000007830	RBBP6	100	92.981	ENSCSAG00000006609	RBBP6	100	92.981	Chlorocebus_sabaeus
ENSSSCG00000007830	RBBP6	63	96.467	ENSCHOG00000000278	RBBP6	75	85.553	Choloepus_hoffmanni
ENSSSCG00000007830	RBBP6	89	81.382	ENSCPBG00000001818	RBBP6	94	81.382	Chrysemys_picta_bellii
ENSSSCG00000007830	RBBP6	100	93.148	ENSCANG00000039613	RBBP6	100	97.454	Colobus_angolensis_palliatus
ENSSSCG00000007830	RBBP6	94	89.218	ENSCGRG00001017193	Rbbp6	94	89.014	Cricetulus_griseus_chok1gshd
ENSSSCG00000007830	RBBP6	94	89.218	ENSCGRG00000011887	Rbbp6	94	89.014	Cricetulus_griseus_crigri
ENSSSCG00000007830	RBBP6	100	92.925	ENSDNOG00000048802	RBBP6	100	92.925	Dasypus_novemcinctus
ENSSSCG00000007830	RBBP6	96	88.624	ENSDORG00000010285	Rbbp6	96	88.974	Dipodomys_ordii
ENSSSCG00000007830	RBBP6	94	94.017	ENSFCAG00000043694	RBBP6	94	93.853	Felis_catus
ENSSSCG00000007830	RBBP6	98	90.136	ENSFDAG00000013132	RBBP6	98	90.306	Fukomys_damarensis
ENSSSCG00000007830	RBBP6	87	80.190	ENSGALG00000006043	RBBP6	86	79.886	Gallus_gallus
ENSSSCG00000007830	RBBP6	89	81.574	ENSGAGG00000004371	RBBP6	94	81.958	Gopherus_agassizii
ENSSSCG00000007830	RBBP6	100	93.259	ENSGGOG00000007137	RBBP6	100	97.222	Gorilla_gorilla
ENSSSCG00000007830	RBBP6	98	90.176	ENSHGLG00000008327	RBBP6	98	90.176	Heterocephalus_glaber_female
ENSSSCG00000007830	RBBP6	95	94.907	ENSHGLG00100007773	RBBP6	95	94.907	Heterocephalus_glaber_male
ENSSSCG00000007830	RBBP6	94	87.843	ENSJJAG00000014549	Rbbp6	94	88.393	Jaculus_jaculus
ENSSSCG00000007830	RBBP6	92	51.018	ENSLOCG00000005487	RBBP6	95	53.528	Lepisosteus_oculatus
ENSSSCG00000007830	RBBP6	100	92.706	ENSLAFG00000009528	RBBP6	100	92.706	Loxodonta_africana
ENSSSCG00000007830	RBBP6	100	92.981	ENSMFAG00000038627	RBBP6	100	97.222	Macaca_fascicularis
ENSSSCG00000007830	RBBP6	100	93.036	ENSMMUG00000015908	RBBP6	100	97.222	Macaca_mulatta
ENSSSCG00000007830	RBBP6	100	92.925	ENSMNEG00000033630	RBBP6	100	97.222	Macaca_nemestrina
ENSSSCG00000007830	RBBP6	100	93.036	ENSMLEG00000030073	RBBP6	100	97.222	Mandrillus_leucophaeus
ENSSSCG00000007830	RBBP6	94	93.187	ENSMICG00000008059	RBBP6	100	97.222	Microcebus_murinus
ENSSSCG00000007830	RBBP6	94	79.538	ENSMODG00000016318	-	100	80.415	Monodelphis_domestica
ENSSSCG00000007830	RBBP6	67	93.407	MGP_CAROLIEiJ_G0030424	-	100	94.286	Mus_caroli
ENSSSCG00000007830	RBBP6	93	90.975	ENSMUSG00000030779	Rbbp6	98	86.135	Mus_musculus
ENSSSCG00000007830	RBBP6	94	87.685	MGP_PahariEiJ_G0013634	Rbbp6	94	87.485	Mus_pahari
ENSSSCG00000007830	RBBP6	94	88.092	MGP_SPRETEiJ_G0031538	Rbbp6	94	87.891	Mus_spretus
ENSSSCG00000007830	RBBP6	94	91.204	ENSMLUG00000010601	-	94	91.204	Myotis_lucifugus
ENSSSCG00000007830	RBBP6	61	87.385	ENSNGAG00000002381	Rbbp6	62	86.751	Nannospalax_galili
ENSSSCG00000007830	RBBP6	93	96.645	ENSNLEG00000011896	RBBP6	100	97.222	Nomascus_leucogenys
ENSSSCG00000007830	RBBP6	88	80.582	ENSMEUG00000014491	RBBP6	88	80.582	Notamacropus_eugenii
ENSSSCG00000007830	RBBP6	58	98.305	ENSOPRG00000016272	RBBP6	59	98.305	Ochotona_princeps
ENSSSCG00000007830	RBBP6	94	78.392	ENSOANG00000007673	RBBP6	100	79.698	Ornithorhynchus_anatinus
ENSSSCG00000007830	RBBP6	96	90.447	ENSOCUG00000004346	RBBP6	97	89.073	Oryctolagus_cuniculus
ENSSSCG00000007830	RBBP6	100	93.207	ENSOGAG00000026986	RBBP6	100	93.263	Otolemur_garnettii
ENSSSCG00000007830	RBBP6	100	92.837	ENSOARG00000017741	RBBP6	67	92.531	Ovis_aries
ENSSSCG00000007830	RBBP6	100	91.588	ENSPPAG00000023595	RBBP6	100	91.588	Pan_paniscus
ENSSSCG00000007830	RBBP6	94	93.957	ENSPPRG00000004074	RBBP6	94	93.794	Panthera_pardus
ENSSSCG00000007830	RBBP6	94	93.898	ENSPTIG00000010342	RBBP6	94	93.735	Panthera_tigris_altaica
ENSSSCG00000007830	RBBP6	100	93.148	ENSPTRG00000007897	RBBP6	100	97.454	Pan_troglodytes
ENSSSCG00000007830	RBBP6	100	93.148	ENSPANG00000019625	RBBP6	100	97.454	Papio_anubis
ENSSSCG00000007830	RBBP6	94	83.021	ENSPCIG00000014000	RBBP6	94	82.982	Phascolarctos_cinereus
ENSSSCG00000007830	RBBP6	100	92.959	ENSPPYG00000007201	RBBP6	100	92.959	Pongo_abelii
ENSSSCG00000007830	RBBP6	100	93.315	ENSPCOG00000021939	RBBP6	100	96.991	Propithecus_coquereli
ENSSSCG00000007830	RBBP6	63	92.182	ENSPVAG00000001110	RBBP6	85	90.418	Pteropus_vampyrus
ENSSSCG00000007830	RBBP6	94	88.626	ENSRNOG00000012806	Rbbp6	94	88.423	Rattus_norvegicus
ENSSSCG00000007830	RBBP6	93	85.252	ENSRBIG00000004517	RBBP6	99	86.199	Rhinopithecus_bieti
ENSSSCG00000007830	RBBP6	100	93.092	ENSRROG00000032092	RBBP6	100	97.222	Rhinopithecus_roxellana
ENSSSCG00000007830	RBBP6	100	93.090	ENSSBOG00000021666	RBBP6	100	96.882	Saimiri_boliviensis_boliviensis
ENSSSCG00000007830	RBBP6	94	84.002	ENSSHAG00000004727	-	100	84.620	Sarcophilus_harrisii
ENSSSCG00000007830	RBBP6	92	96.780	ENSSARG00000004977	RBBP6	100	89.428	Sorex_araneus
ENSSSCG00000007830	RBBP6	100	92.380	ENSTTRG00000002696	RBBP6	100	92.047	Tursiops_truncatus
ENSSSCG00000007830	RBBP6	67	93.126	ENSVPAG00000006458	RBBP6	79	93.126	Vicugna_pacos
ENSSSCG00000007830	RBBP6	98	94.101	ENSVVUG00000005484	RBBP6	98	94.101	Vulpes_vulpes