EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008099 (Gene tree)
Gene ID: 100628028
Gene Symbol: ZC3H8
Alias: Fliz1|ZC3HDC8
Full Name: zinc finger CCCH-type containing 8
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 22113 bases
Position: chr3:44161271-44183383
Accession: 100628028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000039697	zf-CCCH	PF00642.24	6.9e-11	1	2
ENSSSCP00000039697	zf-CCCH	PF00642.24	6.9e-11	2	2
ENSSSCP00000057275	zf-CCCH	PF00642.24	1.7e-10	1	2
ENSSSCP00000057275	zf-CCCH	PF00642.24	1.7e-10	2	2
ENSSSCP00000008646	zf-CCCH	PF00642.24	7.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000046196	ZC3H8-201	3724	-	ENSSSCP00000039697	269 (aa)	-	A0A287A746
ENSSSCT00000008872	ZC3H8-202	1067	XM_005662275	ENSSSCP00000008646	290 (aa)	XP_005662332	F1SUA1
ENSSSCT00000063864	ZC3H8-203	1121	-	ENSSSCP00000057275	290 (aa)	-	A0A287BMH9

Gene Model

Click here to download ENSSSCG00000008099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008099	ZC3H8	97	79.389	ENSG00000144161	ZC3H8	84	78.626	Homo_sapiens
ENSSSCG00000008099	ZC3H8	76	82.353	ENSAMEG00000016207	ZC3H8	82	80.882	Ailuropoda_melanoleuca
ENSSSCG00000008099	ZC3H8	97	75.573	ENSANAG00000022151	ZC3H8	84	74.809	Aotus_nancymaae
ENSSSCG00000008099	ZC3H8	98	82.510	ENSBTAG00000015965	ZC3H8	85	81.369	Bos_taurus
ENSSSCG00000008099	ZC3H8	97	75.573	ENSCJAG00000040629	ZC3H8	84	74.809	Callithrix_jacchus
ENSSSCG00000008099	ZC3H8	98	84.030	ENSCAFG00000007155	ZC3H8	66	82.890	Canis_familiaris
ENSSSCG00000008099	ZC3H8	98	84.030	ENSCAFG00020017540	ZC3H8	79	82.890	Canis_lupus_dingo
ENSSSCG00000008099	ZC3H8	95	80.469	ENSCHIG00000012152	ZC3H8	86	75.368	Capra_hircus
ENSSSCG00000008099	ZC3H8	97	81.298	ENSTSYG00000006668	ZC3H8	85	80.153	Carlito_syrichta
ENSSSCG00000008099	ZC3H8	88	70.339	ENSCPOG00000008258	ZC3H8	84	69.492	Cavia_porcellus
ENSSSCG00000008099	ZC3H8	97	75.573	ENSCCAG00000019771	-	84	74.809	Cebus_capucinus
ENSSSCG00000008099	ZC3H8	97	73.664	ENSCCAG00000034286	-	84	72.901	Cebus_capucinus
ENSSSCG00000008099	ZC3H8	97	79.389	ENSCATG00000031295	ZC3H8	84	78.626	Cercocebus_atys
ENSSSCG00000008099	ZC3H8	97	71.756	ENSCLAG00000006848	ZC3H8	85	70.992	Chinchilla_lanigera
ENSSSCG00000008099	ZC3H8	99	79.851	ENSCSAG00000016801	ZC3H8	100	79.104	Chlorocebus_sabaeus
ENSSSCG00000008099	ZC3H8	88	61.441	ENSCHOG00000010391	ZC3H8	83	61.441	Choloepus_hoffmanni
ENSSSCG00000008099	ZC3H8	94	58.103	ENSCANG00000014691	ZC3H8	83	53.704	Colobus_angolensis_palliatus
ENSSSCG00000008099	ZC3H8	97	70.229	ENSCGRG00001018353	Zc3h8	85	69.466	Cricetulus_griseus_chok1gshd
ENSSSCG00000008099	ZC3H8	97	70.229	ENSCGRG00000016191	Zc3h8	85	69.466	Cricetulus_griseus_crigri
ENSSSCG00000008099	ZC3H8	97	73.664	ENSDORG00000029341	Zc3h8	85	72.519	Dipodomys_ordii
ENSSSCG00000008099	ZC3H8	99	53.731	ENSETEG00000016560	ZC3H8	67	72.789	Echinops_telfairi
ENSSSCG00000008099	ZC3H8	98	85.171	ENSEASG00005006490	ZC3H8	85	84.030	Equus_asinus_asinus
ENSSSCG00000008099	ZC3H8	98	84.791	ENSECAG00000022765	ZC3H8	85	83.650	Equus_caballus
ENSSSCG00000008099	ZC3H8	99	74.627	ENSEEUG00000006984	ZC3H8	86	74.157	Erinaceus_europaeus
ENSSSCG00000008099	ZC3H8	94	82.213	ENSFCAG00000008088	ZC3H8	81	81.028	Felis_catus
ENSSSCG00000008099	ZC3H8	97	72.519	ENSFDAG00000001021	ZC3H8	85	72.519	Fukomys_damarensis
ENSSSCG00000008099	ZC3H8	97	78.626	ENSGGOG00000009004	ZC3H8	84	77.863	Gorilla_gorilla
ENSSSCG00000008099	ZC3H8	97	71.004	ENSHGLG00000008367	ZC3H8	85	71.004	Heterocephalus_glaber_female
ENSSSCG00000008099	ZC3H8	97	80.153	ENSSTOG00000006347	ZC3H8	85	79.771	Ictidomys_tridecemlineatus
ENSSSCG00000008099	ZC3H8	97	75.573	ENSLAFG00000004675	ZC3H8	84	74.809	Loxodonta_africana
ENSSSCG00000008099	ZC3H8	97	79.771	ENSMFAG00000031522	ZC3H8	84	79.008	Macaca_fascicularis
ENSSSCG00000008099	ZC3H8	97	79.771	ENSMMUG00000044163	ZC3H8	84	79.008	Macaca_mulatta
ENSSSCG00000008099	ZC3H8	97	79.771	ENSMNEG00000034502	ZC3H8	84	79.008	Macaca_nemestrina
ENSSSCG00000008099	ZC3H8	97	79.008	ENSMLEG00000029980	ZC3H8	84	78.244	Mandrillus_leucophaeus
ENSSSCG00000008099	ZC3H8	97	70.229	ENSMAUG00000012509	Zc3h8	85	69.466	Mesocricetus_auratus
ENSSSCG00000008099	ZC3H8	97	84.733	ENSMICG00000045551	ZC3H8	85	83.969	Microcebus_murinus
ENSSSCG00000008099	ZC3H8	97	72.137	ENSMOCG00000015035	Zc3h8	85	71.374	Microtus_ochrogaster
ENSSSCG00000008099	ZC3H8	97	73.664	MGP_CAROLIEiJ_G0024276	Zc3h8	85	73.282	Mus_caroli
ENSSSCG00000008099	ZC3H8	97	72.901	ENSMUSG00000027387	Zc3h8	85	72.519	Mus_musculus
ENSSSCG00000008099	ZC3H8	97	72.519	MGP_PahariEiJ_G0025721	Zc3h8	85	72.137	Mus_pahari
ENSSSCG00000008099	ZC3H8	97	72.519	MGP_SPRETEiJ_G0025196	Zc3h8	85	72.137	Mus_spretus
ENSSSCG00000008099	ZC3H8	97	81.343	ENSMPUG00000009562	ZC3H8	86	80.597	Mustela_putorius_furo
ENSSSCG00000008099	ZC3H8	97	76.136	ENSMLUG00000004890	ZC3H8	94	74.906	Myotis_lucifugus
ENSSSCG00000008099	ZC3H8	99	70.896	ENSNGAG00000010427	Zc3h8	85	70.611	Nannospalax_galili
ENSSSCG00000008099	ZC3H8	97	79.771	ENSNLEG00000001619	ZC3H8	84	79.008	Nomascus_leucogenys
ENSSSCG00000008099	ZC3H8	88	70.763	ENSOPRG00000011183	ZC3H8	84	69.915	Ochotona_princeps
ENSSSCG00000008099	ZC3H8	97	69.847	ENSODEG00000006594	ZC3H8	85	69.466	Octodon_degus
ENSSSCG00000008099	ZC3H8	98	79.848	ENSOCUG00000011253	ZC3H8	76	79.087	Oryctolagus_cuniculus
ENSSSCG00000008099	ZC3H8	99	78.731	ENSOGAG00000002554	ZC3H8	85	80.224	Otolemur_garnettii
ENSSSCG00000008099	ZC3H8	97	83.588	ENSOARG00000014475	ZC3H8	85	82.443	Ovis_aries
ENSSSCG00000008099	ZC3H8	97	79.008	ENSPPAG00000028071	ZC3H8	84	78.244	Pan_paniscus
ENSSSCG00000008099	ZC3H8	94	82.609	ENSPPRG00000005648	ZC3H8	86	78.067	Panthera_pardus
ENSSSCG00000008099	ZC3H8	94	82.609	ENSPTIG00000016697	ZC3H8	86	78.067	Panthera_tigris_altaica
ENSSSCG00000008099	ZC3H8	97	79.008	ENSPTRG00000012362	ZC3H8	84	78.244	Pan_troglodytes
ENSSSCG00000008099	ZC3H8	97	79.389	ENSPANG00000016995	ZC3H8	84	78.626	Papio_anubis
ENSSSCG00000008099	ZC3H8	99	68.679	ENSPEMG00000011068	Zc3h8	83	68.441	Peromyscus_maniculatus_bairdii
ENSSSCG00000008099	ZC3H8	99	79.104	ENSPPYG00000012165	ZC3H8	86	78.358	Pongo_abelii
ENSSSCG00000008099	ZC3H8	97	50.570	ENSPCAG00000015426	ZC3H8	85	50.570	Procavia_capensis
ENSSSCG00000008099	ZC3H8	97	83.588	ENSPCOG00000021690	ZC3H8	85	82.824	Propithecus_coquereli
ENSSSCG00000008099	ZC3H8	67	81.148	ENSPVAG00000003510	ZC3H8	56	81.982	Pteropus_vampyrus
ENSSSCG00000008099	ZC3H8	97	70.992	ENSRNOG00000017647	Zc3h8	85	70.229	Rattus_norvegicus
ENSSSCG00000008099	ZC3H8	97	79.771	ENSRBIG00000027345	ZC3H8	84	79.389	Rhinopithecus_bieti
ENSSSCG00000008099	ZC3H8	97	80.153	ENSRROG00000039459	ZC3H8	84	79.771	Rhinopithecus_roxellana
ENSSSCG00000008099	ZC3H8	94	74.704	ENSSBOG00000028167	ZC3H8	85	71.004	Saimiri_boliviensis_boliviensis
ENSSSCG00000008099	ZC3H8	89	72.385	ENSSARG00000012883	ZC3H8	84	71.130	Sorex_araneus
ENSSSCG00000008099	ZC3H8	57	90.909	ENSTBEG00000015547	-	54	94.872	Tupaia_belangeri
ENSSSCG00000008099	ZC3H8	97	85.551	ENSTTRG00000013153	ZC3H8	85	86.312	Tursiops_truncatus
ENSSSCG00000008099	ZC3H8	99	82.836	ENSUAMG00000002411	ZC3H8	87	81.716	Ursus_americanus
ENSSSCG00000008099	ZC3H8	97	83.206	ENSUMAG00000008665	ZC3H8	85	82.061	Ursus_maritimus
ENSSSCG00000008099	ZC3H8	97	87.405	ENSVPAG00000005911	ZC3H8	85	87.786	Vicugna_pacos
ENSSSCG00000008099	ZC3H8	97	84.351	ENSVVUG00000028659	ZC3H8	85	83.206	Vulpes_vulpes