EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008180 (Gene tree)
Gene ID: 100520783
Gene Symbol: EIF5B
Alias: DKFZp434I036|FLJ10524|IF2|KIAA0741
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 67227 bases
Position: chr3:54863623-54930849
Accession: 100520783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000008733	IF-2	PF11987.8	5.5e-19	1	1
ENSSSCP00000020364	IF-2	PF11987.8	6e-19	1	1
ENSSSCP00000008733	GTP_EFTU	PF00009.27	5.7e-34	1	1
ENSSSCP00000020364	GTP_EFTU	PF00009.27	6.1e-34	1	1
ENSSSCP00000008733	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSSCP00000020364	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSSCP00000008733	GTP_EFTU_D2	PF03144.25	3.2e-09	1	1
ENSSSCP00000020364	GTP_EFTU_D2	PF03144.25	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000022947	EIF5B-201	3905	XM_021087192	ENSSSCP00000020364	1219 (aa)	XP_020942851	I3L8K4
ENSSSCT00000008959	EIF5B-202	3742	-	ENSSSCP00000008733	1165 (aa)	-	F1STE8

Gene Model

Click here to download ENSSSCG00000008180's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008180	EIF5B	100	94.595	ENSG00000158417	EIF5B	100	94.431	Homo_sapiens
ENSSSCG00000008180	EIF5B	100	95.499	ENSAMEG00000013269	EIF5B	100	95.499	Ailuropoda_melanoleuca
ENSSSCG00000008180	EIF5B	99	83.292	ENSAPLG00000015401	EIF5B	100	83.552	Anas_platyrhynchos
ENSSSCG00000008180	EIF5B	100	95.082	ENSANAG00000017300	EIF5B	100	95.082	Aotus_nancymaae
ENSSSCG00000008180	EIF5B	100	94.996	ENSBTAG00000034255	EIF5B	99	95.934	Bos_taurus
ENSSSCG00000008180	EIF5B	100	95.987	ENSCAFG00000002278	EIF5B	100	95.987	Canis_familiaris
ENSSSCG00000008180	EIF5B	98	95.310	ENSCAFG00020024623	EIF5B	95	98.718	Canis_lupus_dingo
ENSSSCG00000008180	EIF5B	100	96.066	ENSCHIG00000027106	EIF5B	100	96.066	Capra_hircus
ENSSSCG00000008180	EIF5B	99	95.285	ENSTSYG00000011850	EIF5B	100	95.285	Carlito_syrichta
ENSSSCG00000008180	EIF5B	99	94.229	ENSCCAG00000027156	EIF5B	99	94.229	Cebus_capucinus
ENSSSCG00000008180	EIF5B	100	93.372	ENSCATG00000038292	EIF5B	100	93.699	Cercocebus_atys
ENSSSCG00000008180	EIF5B	100	92.049	ENSCLAG00000007674	EIF5B	100	92.049	Chinchilla_lanigera
ENSSSCG00000008180	EIF5B	100	93.459	ENSCSAG00000017209	EIF5B	100	93.786	Chlorocebus_sabaeus
ENSSSCG00000008180	EIF5B	100	83.945	ENSCPBG00000005318	EIF5B	100	83.483	Chrysemys_picta_bellii
ENSSSCG00000008180	EIF5B	100	93.453	ENSCANG00000042984	EIF5B	100	93.044	Colobus_angolensis_palliatus
ENSSSCG00000008180	EIF5B	100	91.400	ENSCGRG00001010937	Eif5b	100	91.892	Cricetulus_griseus_chok1gshd
ENSSSCG00000008180	EIF5B	99	91.391	ENSCGRG00000003140	Eif5b	100	91.887	Cricetulus_griseus_crigri
ENSSSCG00000008180	EIF5B	94	94.328	ENSDNOG00000005016	EIF5B	99	94.154	Dasypus_novemcinctus
ENSSSCG00000008180	EIF5B	100	89.508	ENSETEG00000001467	EIF5B	100	89.426	Echinops_telfairi
ENSSSCG00000008180	EIF5B	100	95.164	ENSEASG00005018269	EIF5B	100	95.738	Equus_asinus_asinus
ENSSSCG00000008180	EIF5B	100	96.066	ENSECAG00000000102	EIF5B	100	96.066	Equus_caballus
ENSSSCG00000008180	EIF5B	99	94.901	ENSFCAG00000009782	EIF5B	100	94.901	Felis_catus
ENSSSCG00000008180	EIF5B	100	92.056	ENSFDAG00000008737	EIF5B	100	92.629	Fukomys_damarensis
ENSSSCG00000008180	EIF5B	100	83.727	ENSGALG00000016764	EIF5B	100	84.228	Gallus_gallus
ENSSSCG00000008180	EIF5B	100	94.595	ENSGGOG00000001721	EIF5B	100	94.431	Gorilla_gorilla
ENSSSCG00000008180	EIF5B	100	92.213	ENSHGLG00000016367	EIF5B	100	92.049	Heterocephalus_glaber_female
ENSSSCG00000008180	EIF5B	100	92.295	ENSHGLG00100016185	EIF5B	100	92.131	Heterocephalus_glaber_male
ENSSSCG00000008180	EIF5B	100	94.426	ENSSTOG00000014283	EIF5B	100	94.426	Ictidomys_tridecemlineatus
ENSSSCG00000008180	EIF5B	100	68.236	ENSLOCG00000001405	EIF5B	100	69.059	Lepisosteus_oculatus
ENSSSCG00000008180	EIF5B	100	92.711	ENSLAFG00000006209	EIF5B	100	91.646	Loxodonta_africana
ENSSSCG00000008180	EIF5B	100	93.372	ENSMFAG00000038108	EIF5B	100	93.699	Macaca_fascicularis
ENSSSCG00000008180	EIF5B	100	93.372	ENSMMUG00000018946	EIF5B	100	93.699	Macaca_mulatta
ENSSSCG00000008180	EIF5B	100	93.372	ENSMNEG00000040038	EIF5B	100	93.699	Macaca_nemestrina
ENSSSCG00000008180	EIF5B	99	93.229	ENSMLEG00000031596	EIF5B	100	93.559	Mandrillus_leucophaeus
ENSSSCG00000008180	EIF5B	99	83.198	ENSMGAG00000014793	EIF5B	100	83.212	Meleagris_gallopavo
ENSSSCG00000008180	EIF5B	99	95.699	ENSMICG00000015960	EIF5B	99	95.778	Microcebus_murinus
ENSSSCG00000008180	EIF5B	100	89.599	MGP_CAROLIEiJ_G0014061	Eif5b	100	89.517	Mus_caroli
ENSSSCG00000008180	EIF5B	100	89.926	ENSMUSG00000026083	Eif5b	100	89.844	Mus_musculus
ENSSSCG00000008180	EIF5B	100	88.780	MGP_PahariEiJ_G0027308	Eif5b	100	88.744	Mus_pahari
ENSSSCG00000008180	EIF5B	100	89.844	MGP_SPRETEiJ_G0014865	Eif5b	100	89.762	Mus_spretus
ENSSSCG00000008180	EIF5B	100	95.328	ENSMPUG00000012068	EIF5B	100	95.328	Mustela_putorius_furo
ENSSSCG00000008180	EIF5B	99	93.152	ENSMLUG00000008119	EIF5B	100	92.739	Myotis_lucifugus
ENSSSCG00000008180	EIF5B	100	94.676	ENSNLEG00000014172	EIF5B	100	94.513	Nomascus_leucogenys
ENSSSCG00000008180	EIF5B	93	89.640	ENSOPRG00000007359	EIF5B	93	89.104	Ochotona_princeps
ENSSSCG00000008180	EIF5B	99	94.910	ENSOGAG00000013238	EIF5B	99	95.372	Otolemur_garnettii
ENSSSCG00000008180	EIF5B	100	95.898	ENSOARG00000013400	EIF5B	100	95.898	Ovis_aries
ENSSSCG00000008180	EIF5B	99	92.479	ENSPPAG00000029857	EIF5B	100	91.983	Pan_paniscus
ENSSSCG00000008180	EIF5B	99	95.702	ENSPPRG00000010820	EIF5B	99	95.702	Panthera_pardus
ENSSSCG00000008180	EIF5B	99	93.509	ENSPTIG00000021215	EIF5B	99	93.509	Panthera_tigris_altaica
ENSSSCG00000008180	EIF5B	100	94.758	ENSPTRG00000012279	EIF5B	100	94.595	Pan_troglodytes
ENSSSCG00000008180	EIF5B	100	93.290	ENSPANG00000021269	EIF5B	100	94.190	Papio_anubis
ENSSSCG00000008180	EIF5B	99	85.467	ENSPCIG00000011603	EIF5B	99	86.033	Phascolarctos_cinereus
ENSSSCG00000008180	EIF5B	87	93.046	ENSPPYG00000012094	EIF5B	100	92.850	Pongo_abelii
ENSSSCG00000008180	EIF5B	99	88.430	ENSRNOG00000023356	Eif5b	100	88.347	Rattus_norvegicus
ENSSSCG00000008180	EIF5B	100	88.288	ENSRNOG00000046621	AABR07043748.1	100	88.206	Rattus_norvegicus
ENSSSCG00000008180	EIF5B	99	91.384	ENSRBIG00000028180	EIF5B	99	90.992	Rhinopithecus_bieti
ENSSSCG00000008180	EIF5B	100	93.290	ENSRROG00000038801	EIF5B	100	93.617	Rhinopithecus_roxellana
ENSSSCG00000008180	EIF5B	100	94.513	ENSSBOG00000033578	EIF5B	100	94.513	Saimiri_boliviensis_boliviensis
ENSSSCG00000008180	EIF5B	100	87.244	ENSSHAG00000010146	EIF5B	100	87.572	Sarcophilus_harrisii
ENSSSCG00000008180	EIF5B	99	93.476	ENSSARG00000002096	EIF5B	100	93.229	Sorex_araneus
ENSSSCG00000008180	EIF5B	99	80.606	ENSSPUG00000009445	EIF5B	100	80.278	Sphenodon_punctatus
ENSSSCG00000008180	EIF5B	100	81.478	ENSTGUG00000010099	EIF5B	100	81.524	Taeniopygia_guttata
ENSSSCG00000008180	EIF5B	100	94.590	ENSTTRG00000010374	EIF5B	100	94.590	Tursiops_truncatus
ENSSSCG00000008180	EIF5B	99	95.455	ENSUMAG00000008519	EIF5B	99	95.537	Ursus_maritimus
ENSSSCG00000008180	EIF5B	92	94.963	ENSVPAG00000007725	EIF5B	100	94.963	Vicugna_pacos
ENSSSCG00000008180	EIF5B	100	96.069	ENSVVUG00000028702	EIF5B	100	96.069	Vulpes_vulpes