EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008452 (Gene tree)
Gene ID: 100512225
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 116311 bases
Position: chr3:96474459-96590769
Accession: 100512225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	1	6
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	2	6
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	3	6
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	4	6
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	5	6
ENSSSCP00000009020	PPR	PF01535.20	3.9e-32	6	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	1	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	2	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	3	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	4	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	5	6
ENSSSCP00000023826	PPR	PF01535.20	4.1e-32	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009254	LRPPRC-201	6524	XM_003125183	ENSSSCP00000009020	1394 (aa)	XP_003125231	F1S5J1
ENSSSCT00000032182	LRPPRC-202	6449	-	ENSSSCP00000023826	1369 (aa)	-	I3LIC2

Gene Model

Click here to download ENSSSCG00000008452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008452	LRPPRC	99	51.332	ENSAPOG00000016610	lrpprc	99	51.332	Acanthochromis_polyacanthus
ENSSSCG00000008452	LRPPRC	98	85.505	ENSAMEG00000005852	LRPPRC	100	85.505	Ailuropoda_melanoleuca
ENSSSCG00000008452	LRPPRC	99	50.287	ENSACIG00000009604	lrpprc	99	50.287	Amphilophus_citrinellus
ENSSSCG00000008452	LRPPRC	99	50.805	ENSAOCG00000005886	lrpprc	99	50.805	Amphiprion_ocellaris
ENSSSCG00000008452	LRPPRC	99	48.557	ENSAPEG00000002937	lrpprc	98	48.768	Amphiprion_percula
ENSSSCG00000008452	LRPPRC	91	57.315	ENSATEG00000010555	lrpprc	96	59.307	Anabas_testudineus
ENSSSCG00000008452	LRPPRC	96	62.667	ENSACAG00000029278	LRPPRC	99	61.401	Anolis_carolinensis
ENSSSCG00000008452	LRPPRC	99	82.033	ENSANAG00000027440	LRPPRC	99	83.333	Aotus_nancymaae
ENSSSCG00000008452	LRPPRC	97	50.294	ENSACLG00000023712	lrpprc	99	50.294	Astatotilapia_calliptera
ENSSSCG00000008452	LRPPRC	99	81.286	ENSCJAG00000000794	LRPPRC	99	81.629	Callithrix_jacchus
ENSSSCG00000008452	LRPPRC	100	89.455	ENSCHIG00000020173	LRPPRC	100	89.455	Capra_hircus
ENSSSCG00000008452	LRPPRC	96	61.976	ENSCAPG00000013631	LRPPRC	99	61.976	Cavia_aperea
ENSSSCG00000008452	LRPPRC	86	80.747	ENSCPOG00000000204	LRPPRC	99	80.747	Cavia_porcellus
ENSSSCG00000008452	LRPPRC	99	81.349	ENSCCAG00000031900	LRPPRC	99	82.008	Cebus_capucinus
ENSSSCG00000008452	LRPPRC	99	82.105	ENSCATG00000014187	LRPPRC	99	83.144	Cercocebus_atys
ENSSSCG00000008452	LRPPRC	100	79.971	ENSCLAG00000005203	LRPPRC	100	79.971	Chinchilla_lanigera
ENSSSCG00000008452	LRPPRC	99	82.189	ENSCSAG00000013233	LRPPRC	99	82.248	Chlorocebus_sabaeus
ENSSSCG00000008452	LRPPRC	85	82.450	ENSCHOG00000003631	LRPPRC	84	82.450	Choloepus_hoffmanni
ENSSSCG00000008452	LRPPRC	99	77.707	ENSCANG00000034961	LRPPRC	99	79.004	Colobus_angolensis_palliatus
ENSSSCG00000008452	LRPPRC	99	78.838	ENSCGRG00001016261	Lrpprc	99	78.838	Cricetulus_griseus_chok1gshd
ENSSSCG00000008452	LRPPRC	99	78.838	ENSCGRG00000004072	Lrpprc	99	78.838	Cricetulus_griseus_crigri
ENSSSCG00000008452	LRPPRC	99	42.405	ENSCSEG00000003850	lrpprc	96	49.602	Cynoglossus_semilaevis
ENSSSCG00000008452	LRPPRC	99	51.296	ENSCVAG00000012967	lrpprc	99	51.296	Cyprinodon_variegatus
ENSSSCG00000008452	LRPPRC	99	48.713	ENSDARG00000043970	lrpprc	98	48.713	Danio_rerio
ENSSSCG00000008452	LRPPRC	83	62.304	ENSDNOG00000032336	-	100	62.129	Dasypus_novemcinctus
ENSSSCG00000008452	LRPPRC	99	82.652	ENSDNOG00000012594	-	99	82.652	Dasypus_novemcinctus
ENSSSCG00000008452	LRPPRC	99	82.496	ENSDORG00000012233	Lrpprc	99	82.496	Dipodomys_ordii
ENSSSCG00000008452	LRPPRC	100	80.802	ENSETEG00000006657	LRPPRC	100	80.802	Echinops_telfairi
ENSSSCG00000008452	LRPPRC	87	69.880	ENSEEUG00000012340	LRPPRC	93	69.880	Erinaceus_europaeus
ENSSSCG00000008452	LRPPRC	97	49.888	ENSELUG00000012803	lrpprc	99	49.888	Esox_lucius
ENSSSCG00000008452	LRPPRC	100	87.249	ENSFCAG00000013468	LRPPRC	100	87.249	Felis_catus
ENSSSCG00000008452	LRPPRC	96	56.719	ENSFALG00000012738	LRPPRC	99	56.719	Ficedula_albicollis
ENSSSCG00000008452	LRPPRC	99	77.770	ENSFDAG00000015328	LRPPRC	99	77.770	Fukomys_damarensis
ENSSSCG00000008452	LRPPRC	99	50.387	ENSFHEG00000019604	lrpprc	99	50.387	Fundulus_heteroclitus
ENSSSCG00000008452	LRPPRC	99	48.926	ENSGMOG00000008337	lrpprc	99	48.926	Gadus_morhua
ENSSSCG00000008452	LRPPRC	99	50.881	ENSGAFG00000001455	lrpprc	99	50.881	Gambusia_affinis
ENSSSCG00000008452	LRPPRC	99	50.570	ENSGACG00000010679	lrpprc	99	51.331	Gasterosteus_aculeatus
ENSSSCG00000008452	LRPPRC	99	51.225	ENSHBUG00000000393	lrpprc	97	51.225	Haplochromis_burtoni
ENSSSCG00000008452	LRPPRC	99	79.200	ENSHGLG00000006123	LRPPRC	99	79.200	Heterocephalus_glaber_female
ENSSSCG00000008452	LRPPRC	60	79.352	ENSHGLG00100005960	-	99	79.352	Heterocephalus_glaber_male
ENSSSCG00000008452	LRPPRC	96	50.852	ENSHCOG00000002107	lrpprc	96	50.852	Hippocampus_comes
ENSSSCG00000008452	LRPPRC	99	52.134	ENSIPUG00000009406	lrpprc	98	52.204	Ictalurus_punctatus
ENSSSCG00000008452	LRPPRC	99	84.946	ENSSTOG00000011185	LRPPRC	99	84.946	Ictidomys_tridecemlineatus
ENSSSCG00000008452	LRPPRC	99	80.963	ENSJJAG00000020475	Lrpprc	99	80.963	Jaculus_jaculus
ENSSSCG00000008452	LRPPRC	98	48.244	ENSKMAG00000003287	lrpprc	84	48.244	Kryptolebias_marmoratus
ENSSSCG00000008452	LRPPRC	99	46.601	ENSLBEG00000023225	lrpprc	96	56.582	Labrus_bergylta
ENSSSCG00000008452	LRPPRC	99	60.363	ENSLACG00000014030	LRPPRC	99	60.363	Latimeria_chalumnae
ENSSSCG00000008452	LRPPRC	99	57.836	ENSLOCG00000016390	lrpprc	97	57.836	Lepisosteus_oculatus
ENSSSCG00000008452	LRPPRC	100	77.182	ENSLAFG00000008614	LRPPRC	100	77.182	Loxodonta_africana
ENSSSCG00000008452	LRPPRC	99	81.760	ENSMFAG00000041560	LRPPRC	99	82.955	Macaca_fascicularis
ENSSSCG00000008452	LRPPRC	99	80.189	ENSMMUG00000019841	LRPPRC	99	82.888	Macaca_mulatta
ENSSSCG00000008452	LRPPRC	99	82.046	ENSMNEG00000031613	LRPPRC	99	83.333	Macaca_nemestrina
ENSSSCG00000008452	LRPPRC	98	48.170	ENSMAMG00000021835	lrpprc	98	48.476	Mastacembelus_armatus
ENSSSCG00000008452	LRPPRC	99	51.435	ENSMZEG00005027379	lrpprc	99	51.435	Maylandia_zebra
ENSSSCG00000008452	LRPPRC	99	78.551	ENSMAUG00000012118	Lrpprc	99	78.551	Mesocricetus_auratus
ENSSSCG00000008452	LRPPRC	100	84.312	ENSMICG00000010486	LRPPRC	100	84.312	Microcebus_murinus
ENSSSCG00000008452	LRPPRC	99	80.631	ENSMOCG00000006048	Lrpprc	99	80.631	Microtus_ochrogaster
ENSSSCG00000008452	LRPPRC	99	49.678	ENSMMOG00000007830	lrpprc	99	54.545	Mola_mola
ENSSSCG00000008452	LRPPRC	96	69.933	ENSMODG00000000648	LRPPRC	99	69.933	Monodelphis_domestica
ENSSSCG00000008452	LRPPRC	99	49.930	ENSMALG00000001271	lrpprc	99	49.930	Monopterus_albus
ENSSSCG00000008452	LRPPRC	100	84.681	ENSMPUG00000011800	LRPPRC	99	87.143	Mustela_putorius_furo
ENSSSCG00000008452	LRPPRC	100	85.878	ENSMLUG00000010575	LRPPRC	100	85.878	Myotis_lucifugus
ENSSSCG00000008452	LRPPRC	99	80.631	ENSNGAG00000013069	Lrpprc	99	80.775	Nannospalax_galili
ENSSSCG00000008452	LRPPRC	94	49.169	ENSNBRG00000013202	lrpprc	98	54.545	Neolamprologus_brichardi
ENSSSCG00000008452	LRPPRC	99	81.277	ENSNLEG00000016782	LRPPRC	99	82.386	Nomascus_leucogenys
ENSSSCG00000008452	LRPPRC	93	76.190	ENSOPRG00000016774	LRPPRC	93	76.190	Ochotona_princeps
ENSSSCG00000008452	LRPPRC	99	81.120	ENSODEG00000011211	LRPPRC	99	81.120	Octodon_degus
ENSSSCG00000008452	LRPPRC	99	51.238	ENSONIG00000000917	lrpprc	99	51.238	Oreochromis_niloticus
ENSSSCG00000008452	LRPPRC	74	63.528	ENSOANG00000014670	-	98	64.058	Ornithorhynchus_anatinus
ENSSSCG00000008452	LRPPRC	100	84.659	ENSOCUG00000015046	LRPPRC	96	84.731	Oryctolagus_cuniculus
ENSSSCG00000008452	LRPPRC	99	49.433	ENSORLG00000004605	lrpprc	99	48.037	Oryzias_latipes
ENSSSCG00000008452	LRPPRC	91	53.060	ENSORLG00020012536	lrpprc	99	52.226	Oryzias_latipes_hni
ENSSSCG00000008452	LRPPRC	94	56.238	ENSORLG00015018270	lrpprc	99	56.238	Oryzias_latipes_hsok
ENSSSCG00000008452	LRPPRC	99	81.466	ENSOGAG00000012798	LRPPRC	99	81.466	Otolemur_garnettii
ENSSSCG00000008452	LRPPRC	100	89.613	ENSOARG00000006522	LRPPRC	100	89.613	Ovis_aries
ENSSSCG00000008452	LRPPRC	99	78.199	ENSPPAG00000040876	LRPPRC	99	80.189	Pan_paniscus
ENSSSCG00000008452	LRPPRC	100	86.891	ENSPPRG00000006578	LRPPRC	100	86.891	Panthera_pardus
ENSSSCG00000008452	LRPPRC	97	87.518	ENSPTIG00000000933	LRPPRC	97	87.518	Panthera_tigris_altaica
ENSSSCG00000008452	LRPPRC	99	80.905	ENSPTRG00000011880	LRPPRC	99	81.439	Pan_troglodytes
ENSSSCG00000008452	LRPPRC	99	81.831	ENSPANG00000020731	LRPPRC	99	82.765	Papio_anubis
ENSSSCG00000008452	LRPPRC	86	56.502	ENSPKIG00000022232	lrpprc	97	56.502	Paramormyrops_kingsleyae
ENSSSCG00000008452	LRPPRC	61	64.327	ENSPSIG00000006830	-	98	64.327	Pelodiscus_sinensis
ENSSSCG00000008452	LRPPRC	67	45.367	ENSPMGG00000016597	lrpprc	96	45.367	Periophthalmus_magnuspinnatus
ENSSSCG00000008452	LRPPRC	94	45.482	ENSPMAG00000002147	lrpprc	99	45.482	Petromyzon_marinus
ENSSSCG00000008452	LRPPRC	99	50.636	ENSPFOG00000011227	lrpprc	99	50.890	Poecilia_formosa
ENSSSCG00000008452	LRPPRC	99	50.424	ENSPLAG00000004018	lrpprc	99	50.424	Poecilia_latipinna
ENSSSCG00000008452	LRPPRC	99	50.706	ENSPMEG00000016425	lrpprc	99	50.706	Poecilia_mexicana
ENSSSCG00000008452	LRPPRC	99	50.462	ENSPREG00000003662	lrpprc	99	50.459	Poecilia_reticulata
ENSSSCG00000008452	LRPPRC	57	80.275	ENSPPYG00000029532	-	99	80.275	Pongo_abelii
ENSSSCG00000008452	LRPPRC	84	79.965	ENSPCAG00000001430	LRPPRC	84	79.965	Procavia_capensis
ENSSSCG00000008452	LRPPRC	100	83.656	ENSPVAG00000002007	LRPPRC	100	83.656	Pteropus_vampyrus
ENSSSCG00000008452	LRPPRC	99	49.148	ENSPNYG00000000756	lrpprc	99	49.148	Pundamilia_nyererei
ENSSSCG00000008452	LRPPRC	99	53.884	ENSPNAG00000002895	lrpprc	99	53.884	Pygocentrus_nattereri
ENSSSCG00000008452	LRPPRC	99	78.694	ENSRNOG00000005877	Lrpprc	99	78.853	Rattus_norvegicus
ENSSSCG00000008452	LRPPRC	99	79.701	ENSRBIG00000031552	LRPPRC	99	79.701	Rhinopithecus_bieti
ENSSSCG00000008452	LRPPRC	99	81.205	ENSSBOG00000011807	LRPPRC	99	82.386	Saimiri_boliviensis_boliviensis
ENSSSCG00000008452	LRPPRC	96	67.634	ENSSHAG00000018725	LRPPRC	99	67.634	Sarcophilus_harrisii
ENSSSCG00000008452	LRPPRC	99	51.660	ENSSFOG00015001042	lrpprc	99	51.660	Scleropages_formosus
ENSSSCG00000008452	LRPPRC	99	51.295	ENSSDUG00000019062	lrpprc	99	51.295	Seriola_dumerili
ENSSSCG00000008452	LRPPRC	99	45.337	ENSSLDG00000023028	lrpprc	99	45.500	Seriola_lalandi_dorsalis
ENSSSCG00000008452	LRPPRC	87	72.795	ENSSARG00000000426	LRPPRC	100	72.795	Sorex_araneus
ENSSSCG00000008452	LRPPRC	99	47.922	ENSSPAG00000000162	lrpprc	99	47.922	Stegastes_partitus
ENSSSCG00000008452	LRPPRC	94	56.317	ENSTGUG00000003759	LRPPRC	99	56.317	Taeniopygia_guttata
ENSSSCG00000008452	LRPPRC	92	51.951	ENSTRUG00000008409	lrpprc	96	51.951	Takifugu_rubripes
ENSSSCG00000008452	LRPPRC	99	50.958	ENSTNIG00000007470	lrpprc	99	51.882	Tetraodon_nigroviridis
ENSSSCG00000008452	LRPPRC	100	87.374	ENSTTRG00000006403	LRPPRC	100	87.374	Tursiops_truncatus
ENSSSCG00000008452	LRPPRC	96	84.140	ENSVPAG00000008993	LRPPRC	99	84.140	Vicugna_pacos
ENSSSCG00000008452	LRPPRC	99	58.849	ENSXETG00000009296	lrpprc	99	59.204	Xenopus_tropicalis
ENSSSCG00000008452	LRPPRC	99	46.992	ENSXCOG00000013343	lrpprc	95	53.785	Xiphophorus_couchianus
ENSSSCG00000008452	LRPPRC	99	50.525	ENSXMAG00000018108	lrpprc	99	50.525	Xiphophorus_maculatus