EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000008546 (Gene tree)
Gene ID
100521316
Gene Symbol
GPN1
Alias
ATPBD1A|MBDIN|NTPBP|RPAP4|XAB1
Full Name
GPN-loop GTPase 1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
28092 bases
Position
chr3:111537605-111565696
Accession
100521316
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000049779GTP_EFTUPF00009.274.7e-0711
ENSSSCP00000009111MMR_HSR1PF01926.237.3e-0611
ENSSSCP00000049779MMR_HSR1PF01926.231.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000009351GPN1-2022261-ENSSSCP00000009111332 (aa)-F1SEE2
ENSSSCT00000052555GPN1-2013647XM_003125289ENSSSCP00000049779373 (aa)XP_003125337A0A287B0M8
Gene Model
Click here to download ENSSSCG00000008546's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008546's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000008546GPN19794.751ENSG00000198522GPN19994.881Homo_sapiens
ENSSSCG00000008546GPN19994.086ENSAMEG00000001201GPN19694.086Ailuropoda_melanoleuca
ENSSSCG00000008546GPN19974.731ENSAPEG00000000050gpn19374.731Amphiprion_percula
ENSSSCG00000008546GPN19272.093ENSAPEG00000000067gpn18968.986Amphiprion_percula
ENSSSCG00000008546GPN19976.550ENSATEG00000015542gpn19776.550Anabas_testudineus
ENSSSCG00000008546GPN19281.739ENSAPLG00000003530GPN19981.739Anas_platyrhynchos
ENSSSCG00000008546GPN19075.439ENSACAG00000008974GPN19976.812Anolis_carolinensis
ENSSSCG00000008546GPN19992.742ENSANAG00000024716GPN19692.742Aotus_nancymaae
ENSSSCG00000008546GPN19877.534ENSACLG00000025644gpn19176.986Astatotilapia_calliptera
ENSSSCG00000008546GPN19977.273ENSAMXG00000031098gpn19277.273Astyanax_mexicanus
ENSSSCG00000008546GPN17660.630WBGene00001661gop-27360.153Caenorhabditis_elegans
ENSSSCG00000008546GPN19793.889ENSCJAG00000046633GPN19693.280Callithrix_jacchus
ENSSSCG00000008546GPN15495.000ENSCAFG00000032406-9694.686Canis_familiaris
ENSSSCG00000008546GPN17481.295ENSCAFG00000024379-10083.453Canis_familiaris
ENSSSCG00000008546GPN19795.278ENSCAFG00000005160-9593.817Canis_familiaris
ENSSSCG00000008546GPN19794.722ENSCAFG00020022034-9993.280Canis_lupus_dingo
ENSSSCG00000008546GPN19795.000ENSCAFG00020020326-9993.548Canis_lupus_dingo
ENSSSCG00000008546GPN110089.544ENSCHIG00000017789-9989.544Capra_hircus
ENSSSCG00000008546GPN19991.398ENSTSYG00000006604GPN19991.398Carlito_syrichta
ENSSSCG00000008546GPN17991.837ENSCAPG00000015026GPN19091.837Cavia_aperea
ENSSSCG00000008546GPN110090.617ENSCPOG00000004359GPN110090.617Cavia_porcellus
ENSSSCG00000008546GPN19793.889ENSCCAG00000035409GPN19693.011Cebus_capucinus
ENSSSCG00000008546GPN19794.444ENSCATG00000042260GPN19693.817Cercocebus_atys
ENSSSCG00000008546GPN110091.153ENSCLAG00000008226GPN19892.371Chinchilla_lanigera
ENSSSCG00000008546GPN19794.167ENSCSAG00000010222GPN19693.548Chlorocebus_sabaeus
ENSSSCG00000008546GPN19784.530ENSCPBG00000009367GPN19982.933Chrysemys_picta_bellii
ENSSSCG00000008546GPN16873.451ENSCING00000023847-8668.248Ciona_intestinalis
ENSSSCG00000008546GPN16775.113ENSCSAVG00000004925-9565.614Ciona_savignyi
ENSSSCG00000008546GPN19794.444ENSCANG00000031249GPN19994.539Colobus_angolensis_palliatus
ENSSSCG00000008546GPN110090.617ENSCGRG00001017621Gpn110090.617Cricetulus_griseus_chok1gshd
ENSSSCG00000008546GPN110090.617ENSCGRG00000003560Gpn110090.617Cricetulus_griseus_crigri
ENSSSCG00000008546GPN19371.552ENSCSEG00000019468gpn18771.552Cynoglossus_semilaevis
ENSSSCG00000008546GPN19977.628ENSDARG00000043928gpn19277.628Danio_rerio
ENSSSCG00000008546GPN19991.667ENSDORG00000006558Gpn19991.667Dipodomys_ordii
ENSSSCG00000008546GPN18353.333FBgn0040346CG37046560.484Drosophila_melanogaster
ENSSSCG00000008546GPN19796.667ENSEASG00005009082GPN19995.968Equus_asinus_asinus
ENSSSCG00000008546GPN19790.556ENSECAG00000009579GPN19990.054Equus_caballus
ENSSSCG00000008546GPN19793.664ENSEEUG00000013421GPN19992.021Erinaceus_europaeus
ENSSSCG00000008546GPN19677.374ENSELUG00000006293gpn18976.816Esox_lucius
ENSSSCG00000008546GPN19194.985ENSFCAG00000030425GPN19995.222Felis_catus
ENSSSCG00000008546GPN18782.716ENSFALG00000011331GPN19682.716Ficedula_albicollis
ENSSSCG00000008546GPN110090.080ENSFDAG00000014526GPN19990.080Fukomys_damarensis
ENSSSCG00000008546GPN19578.090ENSGMOG00000016174gpn19978.090Gadus_morhua
ENSSSCG00000008546GPN19582.254ENSGALG00000016505GPN19881.492Gallus_gallus
ENSSSCG00000008546GPN19676.323ENSGAFG00000016670gpn17575.487Gambusia_affinis
ENSSSCG00000008546GPN19676.796ENSGACG00000017639gpn19680.122Gasterosteus_aculeatus
ENSSSCG00000008546GPN19585.070ENSGAGG00000016449GPN19982.527Gopherus_agassizii
ENSSSCG00000008546GPN19794.751ENSGGOG00000015285GPN19693.548Gorilla_gorilla
ENSSSCG00000008546GPN19877.808ENSHBUG00000022933gpn19177.260Haplochromis_burtoni
ENSSSCG00000008546GPN19989.402ENSHGLG00000010319GPN19889.646Heterocephalus_glaber_female
ENSSSCG00000008546GPN19989.402ENSHGLG00100016905GPN19889.646Heterocephalus_glaber_male
ENSSSCG00000008546GPN19876.923ENSIPUG00000011938gpn19376.011Ictalurus_punctatus
ENSSSCG00000008546GPN110092.225ENSSTOG00000006379-10092.225Ictidomys_tridecemlineatus
ENSSSCG00000008546GPN19873.569ENSKMAG00000011063gpn19473.569Kryptolebias_marmoratus
ENSSSCG00000008546GPN16884.071ENSLACG00000001268GPN19888.938Latimeria_chalumnae
ENSSSCG00000008546GPN19878.297ENSLOCG00000015949gpn19178.297Lepisosteus_oculatus
ENSSSCG00000008546GPN110093.834ENSLAFG00000011179GPN19994.086Loxodonta_africana
ENSSSCG00000008546GPN19794.444ENSMFAG00000035863GPN19693.817Macaca_fascicularis
ENSSSCG00000008546GPN19794.444ENSMMUG00000019745GPN19693.817Macaca_mulatta
ENSSSCG00000008546GPN19794.444ENSMNEG00000027876GPN19693.817Macaca_nemestrina
ENSSSCG00000008546GPN19788.056ENSMLEG00000031376GPN19683.871Mandrillus_leucophaeus
ENSSSCG00000008546GPN19877.534ENSMZEG00005003265gpn19176.986Maylandia_zebra
ENSSSCG00000008546GPN18382.958ENSMGAG00000014062GPN19882.958Meleagris_gallopavo
ENSSSCG00000008546GPN19792.244ENSMAUG00000018225Gpn110091.689Mesocricetus_auratus
ENSSSCG00000008546GPN19993.817ENSMICG00000042626GPN19993.817Microcebus_murinus
ENSSSCG00000008546GPN19792.521ENSMOCG00000021769Gpn110091.689Microtus_ochrogaster
ENSSSCG00000008546GPN19577.410ENSMMOG00000002005gpn17276.033Mola_mola
ENSSSCG00000008546GPN19588.418ENSMODG00000015592GPN19787.088Monodelphis_domestica
ENSSSCG00000008546GPN110075.789ENSMALG00000015121gpn18874.737Monopterus_albus
ENSSSCG00000008546GPN110090.349MGP_CAROLIEiJ_G0027095Gpn110090.349Mus_caroli
ENSSSCG00000008546GPN110090.080ENSMUSG00000064037Gpn110090.080Mus_musculus
ENSSSCG00000008546GPN19389.595MGP_PahariEiJ_G0029286Gpn19689.595Mus_pahari
ENSSSCG00000008546GPN110089.544MGP_SPRETEiJ_G0028091Gpn110089.544Mus_spretus
ENSSSCG00000008546GPN19795.568ENSMLUG00000011928GPN19794.906Myotis_lucifugus
ENSSSCG00000008546GPN19794.766ENSNLEG00000003945GPN19994.881Nomascus_leucogenys
ENSSSCG00000008546GPN19794.766ENSOPRG00000013015GPN19993.817Ochotona_princeps
ENSSSCG00000008546GPN19990.860ENSODEG00000007092GPN19990.860Octodon_degus
ENSSSCG00000008546GPN19977.394ENSONIG00000003361gpn19576.064Oreochromis_niloticus
ENSSSCG00000008546GPN19976.757ENSORLG00020015676gpn19574.312Oryzias_latipes_hni
ENSSSCG00000008546GPN19679.109ENSORLG00015013049gpn19279.109Oryzias_latipes_hsok
ENSSSCG00000008546GPN19976.216ENSOMEG00000022023gpn19576.216Oryzias_melastigma
ENSSSCG00000008546GPN19093.713ENSOGAG00000014057GPN19692.486Otolemur_garnettii
ENSSSCG00000008546GPN19794.490ENSPPAG00000022926GPN19693.548Pan_paniscus
ENSSSCG00000008546GPN19993.280ENSPPRG00000001472GPN19694.403Panthera_pardus
ENSSSCG00000008546GPN19993.280ENSPTIG00000007504GPN19694.403Panthera_tigris_altaica
ENSSSCG00000008546GPN19794.215ENSPTRG00000011776GPN19693.280Pan_troglodytes
ENSSSCG00000008546GPN19794.444ENSPANG00000011578GPN19693.817Papio_anubis
ENSSSCG00000008546GPN19680.392ENSPKIG00000007460gpn18980.392Paramormyrops_kingsleyae
ENSSSCG00000008546GPN19971.046ENSPMGG00000013238gpn19268.633Periophthalmus_magnuspinnatus
ENSSSCG00000008546GPN110091.421ENSPEMG00000003913Gpn110091.421Peromyscus_maniculatus_bairdii
ENSSSCG00000008546GPN19588.418ENSPCIG00000026182GPN19786.559Phascolarctos_cinereus
ENSSSCG00000008546GPN19874.194ENSPFOG00000000034gpn19473.656Poecilia_formosa
ENSSSCG00000008546GPN19874.194ENSPLAG00000023798gpn19473.656Poecilia_latipinna
ENSSSCG00000008546GPN19874.194ENSPMEG00000002283gpn19473.925Poecilia_mexicana
ENSSSCG00000008546GPN19874.731ENSPREG00000009028gpn19872.046Poecilia_reticulata
ENSSSCG00000008546GPN19785.675ENSPPYG00000012538GPN19393.569Pongo_abelii
ENSSSCG00000008546GPN19795.556ENSPCOG00000028038GPN19994.624Propithecus_coquereli
ENSSSCG00000008546GPN19390.173ENSPVAG00000015220GPN110090.173Pteropus_vampyrus
ENSSSCG00000008546GPN19877.808ENSPNYG00000019130gpn19177.260Pundamilia_nyererei
ENSSSCG00000008546GPN19077.937ENSPNAG00000010900gpn17979.878Pygocentrus_nattereri
ENSSSCG00000008546GPN19791.413ENSRNOG00000004941Gpn110090.617Rattus_norvegicus
ENSSSCG00000008546GPN19794.444ENSRBIG00000038211GPN19693.817Rhinopithecus_bieti
ENSSSCG00000008546GPN19794.444ENSRROG00000026146GPN19994.539Rhinopithecus_roxellana
ENSSSCG00000008546GPN19448.641YJR072CNPA37852.117Saccharomyces_cerevisiae
ENSSSCG00000008546GPN19794.215ENSSBOG00000025586GPN19693.280Saimiri_boliviensis_boliviensis
ENSSSCG00000008546GPN19779.006ENSSFOG00015019441gpn19079.006Scleropages_formosus
ENSSSCG00000008546GPN19575.766ENSSMAG00000005973gpn19174.590Scophthalmus_maximus
ENSSSCG00000008546GPN110074.670ENSSDUG00000006929gpn19871.693Seriola_dumerili
ENSSSCG00000008546GPN110074.670ENSSLDG00000014532gpn19474.670Seriola_lalandi_dorsalis
ENSSSCG00000008546GPN18380.583ENSSPAG00000015690gpn18377.914Stegastes_partitus
ENSSSCG00000008546GPN19283.526ENSTGUG00000014626GPN19981.285Taeniopygia_guttata
ENSSSCG00000008546GPN19576.404ENSTRUG00000004290gpn19573.421Takifugu_rubripes
ENSSSCG00000008546GPN19577.311ENSTNIG00000002572gpn19875.815Tetraodon_nigroviridis
ENSSSCG00000008546GPN19993.280ENSTBEG00000007425GPN19993.280Tupaia_belangeri
ENSSSCG00000008546GPN19994.086ENSTTRG00000012531GPN19992.204Tursiops_truncatus
ENSSSCG00000008546GPN17983.051ENSUAMG00000012406-9688.841Ursus_americanus
ENSSSCG00000008546GPN19994.355ENSUMAG00000020247GPN18894.355Ursus_maritimus
ENSSSCG00000008546GPN19972.823ENSXMAG00000005436gpn18672.032Xiphophorus_maculatus

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