EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000008600 (Gene tree)
Gene ID
100523902
Gene Symbol
PUM2
Alias
KIAA0235|PUMH2
Full Name
pumilio RNA binding family member 2
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
107608 bases
Position
chr3:117857960-117965567
Accession
100523902
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000059383PUFPF00806.193.3e-7418
ENSSSCP00000059383PUFPF00806.193.3e-7428
ENSSSCP00000059383PUFPF00806.193.3e-7438
ENSSSCP00000059383PUFPF00806.193.3e-7448
ENSSSCP00000059383PUFPF00806.193.3e-7458
ENSSSCP00000059383PUFPF00806.193.3e-7468
ENSSSCP00000059383PUFPF00806.193.3e-7478
ENSSSCP00000059383PUFPF00806.193.3e-7488
ENSSSCP00000056862PUFPF00806.195.1e-7418
ENSSSCP00000056862PUFPF00806.195.1e-7428
ENSSSCP00000056862PUFPF00806.195.1e-7438
ENSSSCP00000056862PUFPF00806.195.1e-7448
ENSSSCP00000056862PUFPF00806.195.1e-7458
ENSSSCP00000056862PUFPF00806.195.1e-7468
ENSSSCP00000056862PUFPF00806.195.1e-7478
ENSSSCP00000056862PUFPF00806.195.1e-7488
ENSSSCP00000040708PUFPF00806.195.7e-7418
ENSSSCP00000040708PUFPF00806.195.7e-7428
ENSSSCP00000040708PUFPF00806.195.7e-7438
ENSSSCP00000040708PUFPF00806.195.7e-7448
ENSSSCP00000040708PUFPF00806.195.7e-7458
ENSSSCP00000040708PUFPF00806.195.7e-7468
ENSSSCP00000040708PUFPF00806.195.7e-7478
ENSSSCP00000040708PUFPF00806.195.7e-7488
ENSSSCP00000034381PUFPF00806.197e-7418
ENSSSCP00000034381PUFPF00806.197e-7428
ENSSSCP00000034381PUFPF00806.197e-7438
ENSSSCP00000034381PUFPF00806.197e-7448
ENSSSCP00000034381PUFPF00806.197e-7458
ENSSSCP00000034381PUFPF00806.197e-7468
ENSSSCP00000034381PUFPF00806.197e-7478
ENSSSCP00000034381PUFPF00806.197e-7488
ENSSSCP00000044630PUFPF00806.197e-7418
ENSSSCP00000044630PUFPF00806.197e-7428
ENSSSCP00000044630PUFPF00806.197e-7438
ENSSSCP00000044630PUFPF00806.197e-7448
ENSSSCP00000044630PUFPF00806.197e-7458
ENSSSCP00000044630PUFPF00806.197e-7468
ENSSSCP00000044630PUFPF00806.197e-7478
ENSSSCP00000044630PUFPF00806.197e-7488
ENSSSCP00000009171PUFPF00806.191.2e-7318
ENSSSCP00000009171PUFPF00806.191.2e-7328
ENSSSCP00000009171PUFPF00806.191.2e-7338
ENSSSCP00000009171PUFPF00806.191.2e-7348
ENSSSCP00000009171PUFPF00806.191.2e-7358
ENSSSCP00000009171PUFPF00806.191.2e-7368
ENSSSCP00000009171PUFPF00806.191.2e-7378
ENSSSCP00000009171PUFPF00806.191.2e-7388
ENSSSCP00000042434PUFPF00806.191.2e-7318
ENSSSCP00000042434PUFPF00806.191.2e-7328
ENSSSCP00000042434PUFPF00806.191.2e-7338
ENSSSCP00000042434PUFPF00806.191.2e-7348
ENSSSCP00000042434PUFPF00806.191.2e-7358
ENSSSCP00000042434PUFPF00806.191.2e-7368
ENSSSCP00000042434PUFPF00806.191.2e-7378
ENSSSCP00000042434PUFPF00806.191.2e-7388
ENSSSCP00000049222PUFPF00806.191.3e-7318
ENSSSCP00000049222PUFPF00806.191.3e-7328
ENSSSCP00000049222PUFPF00806.191.3e-7338
ENSSSCP00000049222PUFPF00806.191.3e-7348
ENSSSCP00000049222PUFPF00806.191.3e-7358
ENSSSCP00000049222PUFPF00806.191.3e-7368
ENSSSCP00000049222PUFPF00806.191.3e-7378
ENSSSCP00000049222PUFPF00806.191.3e-7388
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000037408PUM2-2046803XM_013996322ENSSSCP000000343811004 (aa)XP_013851776A0A286ZSD2
ENSSSCT00000037311PUM2-2066156XM_013996324ENSSSCP00000056862969 (aa)XP_013851778A0A287BK15
ENSSSCT00000050255PUM2-2016137XM_003481283ENSSSCP00000040708981 (aa)XP_003481331A0A287AA81
ENSSSCT00000009411PUM2-2026607XM_003125374ENSSSCP000000091711060 (aa)XP_003125422F1SCU6
ENSSSCT00000050337PUM2-2083237XM_005662719ENSSSCP000000492221072 (aa)XP_005662776A0A287AZD1
ENSSSCT00000045867PUM2-2056415XM_021087804ENSSSCP00000059383925 (aa)XP_020943463A0A287BSG6
ENSSSCT00000045037PUM2-2036366XM_021087796ENSSSCP000000446301004 (aa)XP_020943455A0A286ZSD2
ENSSSCT00000043465PUM2-2076588XM_021087792ENSSSCP000000424341060 (aa)XP_020943451F1SCU6
Gene Model
Click here to download ENSSSCG00000008600's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008600's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000008600PUM210089.563ENSSSCG00000003591PUM18687.588
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000008600PUM210098.611ENSG00000055917PUM2100100.000Homo_sapiens
ENSSSCG00000008600PUM210091.198ENSAPOG00000015756pum29981.723Acanthochromis_polyacanthus
ENSSSCG00000008600PUM210099.062ENSAMEG00000002823PUM210099.062Ailuropoda_melanoleuca
ENSSSCG00000008600PUM29085.863ENSACIG00000010646pum29884.330Amphilophus_citrinellus
ENSSSCG00000008600PUM29875.741ENSAOCG00000016619pum28774.744Amphiprion_ocellaris
ENSSSCG00000008600PUM210091.198ENSAPEG00000019924pum29981.723Amphiprion_percula
ENSSSCG00000008600PUM210078.173ENSATEG00000015030pum29076.015Anabas_testudineus
ENSSSCG00000008600PUM210094.557ENSAPLG00000010496PUM29092.770Anas_platyrhynchos
ENSSSCG00000008600PUM210093.313ENSACAG00000010491PUM210092.207Anolis_carolinensis
ENSSSCG00000008600PUM210098.513ENSANAG00000021807PUM299100.000Aotus_nancymaae
ENSSSCG00000008600PUM210077.898ENSACLG00000022532pum28975.967Astatotilapia_calliptera
ENSSSCG00000008600PUM210099.436ENSBTAG00000011155PUM210099.436Bos_taurus
ENSSSCG00000008600PUM210098.414ENSCJAG00000007450PUM299100.000Callithrix_jacchus
ENSSSCG00000008600PUM210099.341ENSCAFG00000003839PUM210099.341Canis_familiaris
ENSSSCG00000008600PUM210099.305ENSCAFG00020025689PUM299100.000Canis_lupus_dingo
ENSSSCG00000008600PUM210099.530ENSCHIG00000022180PUM210099.530Capra_hircus
ENSSSCG00000008600PUM210098.589ENSTSYG00000014463PUM210098.589Carlito_syrichta
ENSSSCG00000008600PUM210086.545ENSCAPG00000016888PUM29698.958Cavia_aperea
ENSSSCG00000008600PUM210097.566ENSCPOG00000031996PUM29999.272Cavia_porcellus
ENSSSCG00000008600PUM210098.612ENSCCAG00000037035PUM299100.000Cebus_capucinus
ENSSSCG00000008600PUM210098.592ENSCATG00000043826PUM299100.000Cercocebus_atys
ENSSSCG00000008600PUM210098.030ENSCLAG00000006048PUM29999.515Chinchilla_lanigera
ENSSSCG00000008600PUM210098.592ENSCSAG00000008087PUM210098.592Chlorocebus_sabaeus
ENSSSCG00000008600PUM286100.000ENSCHOG00000004575PUM286100.000Choloepus_hoffmanni
ENSSSCG00000008600PUM210092.366ENSCPBG00000019966PUM29997.573Chrysemys_picta_bellii
ENSSSCG00000008600PUM210098.498ENSCANG00000032797PUM299100.000Colobus_angolensis_palliatus
ENSSSCG00000008600PUM210097.746ENSCGRG00001025023Pum29999.515Cricetulus_griseus_chok1gshd
ENSSSCG00000008600PUM210097.746ENSCGRG00000001580Pum29999.515Cricetulus_griseus_crigri
ENSSSCG00000008600PUM29585.845ENSCSEG00000020899pum28585.845Cynoglossus_semilaevis
ENSSSCG00000008600PUM210078.793ENSCVAG00000002426pum210074.885Cyprinodon_variegatus
ENSSSCG00000008600PUM210079.003ENSDARG00000061040pum29074.149Danio_rerio
ENSSSCG00000008600PUM210095.954ENSDNOG00000006733PUM299100.000Dasypus_novemcinctus
ENSSSCG00000008600PUM210095.406ENSDORG00000011453Pum210091.869Dipodomys_ordii
ENSSSCG00000008600PUM29298.932ENSETEG00000017683PUM28798.932Echinops_telfairi
ENSSSCG00000008600PUM27463.263ENSEBUG00000014828pum27376.675Eptatretus_burgeri
ENSSSCG00000008600PUM29572.630ENSEBUG00000004435pum29286.019Eptatretus_burgeri
ENSSSCG00000008600PUM210099.153ENSEASG00005009429PUM210099.153Equus_asinus_asinus
ENSSSCG00000008600PUM210099.280ENSECAG00000021930PUM210099.280Equus_caballus
ENSSSCG00000008600PUM29191.031ENSEEUG00000003224-8091.388Erinaceus_europaeus
ENSSSCG00000008600PUM210078.440ENSELUG00000014997pum29074.816Esox_lucius
ENSSSCG00000008600PUM210099.153ENSFCAG00000027520PUM210099.153Felis_catus
ENSSSCG00000008600PUM210094.868ENSFALG00000001759PUM210093.521Ficedula_albicollis
ENSSSCG00000008600PUM210097.004ENSFDAG00000019685PUM29999.272Fukomys_damarensis
ENSSSCG00000008600PUM29691.443ENSFHEG00000021596pum29981.933Fundulus_heteroclitus
ENSSSCG00000008600PUM210077.259ENSGMOG00000006903pum210073.162Gadus_morhua
ENSSSCG00000008600PUM210094.712ENSGALG00000016481PUM210093.239Gallus_gallus
ENSSSCG00000008600PUM29691.463ENSGAFG00000013691pum210082.180Gambusia_affinis
ENSSSCG00000008600PUM210076.923ENSGACG00000009670pum210073.941Gasterosteus_aculeatus
ENSSSCG00000008600PUM210094.090ENSGAGG00000020698PUM210092.582Gopherus_agassizii
ENSSSCG00000008600PUM210098.592ENSGGOG00000011374PUM299100.000Gorilla_gorilla
ENSSSCG00000008600PUM210086.076ENSHBUG00000016453pum29070.009Haplochromis_burtoni
ENSSSCG00000008600PUM210095.833ENSHGLG00000007892PUM29997.816Heterocephalus_glaber_female
ENSSSCG00000008600PUM210096.384ENSHGLG00100015510PUM210094.752Heterocephalus_glaber_male
ENSSSCG00000008600PUM29991.443ENSHCOG00000010119pum28191.505Hippocampus_comes
ENSSSCG00000008600PUM210099.060ENSSTOG00000006262PUM210099.060Ictidomys_tridecemlineatus
ENSSSCG00000008600PUM210097.848ENSJJAG00000020969Pum29999.757Jaculus_jaculus
ENSSSCG00000008600PUM210081.174ENSKMAG00000017216pum29581.311Kryptolebias_marmoratus
ENSSSCG00000008600PUM29990.998ENSLBEG00000020488pum28391.063Labrus_bergylta
ENSSSCG00000008600PUM210092.212ENSLACG00000008723PUM28990.196Latimeria_chalumnae
ENSSSCG00000008600PUM210088.854ENSLOCG00000017196pum28985.754Lepisosteus_oculatus
ENSSSCG00000008600PUM210097.383ENSLAFG00000009278PUM210097.383Loxodonta_africana
ENSSSCG00000008600PUM210098.498ENSMFAG00000000492PUM299100.000Macaca_fascicularis
ENSSSCG00000008600PUM210098.498ENSMMUG00000023181PUM299100.000Macaca_mulatta
ENSSSCG00000008600PUM210098.498ENSMNEG00000039659PUM299100.000Macaca_nemestrina
ENSSSCG00000008600PUM210098.592ENSMLEG00000039243PUM299100.000Mandrillus_leucophaeus
ENSSSCG00000008600PUM210077.829ENSMAMG00000006121pum29076.041Mastacembelus_armatus
ENSSSCG00000008600PUM210078.140ENSMZEG00005000791pum28976.107Maylandia_zebra
ENSSSCG00000008600PUM210094.712ENSMGAG00000014040PUM210093.239Meleagris_gallopavo
ENSSSCG00000008600PUM210097.844ENSMAUG00000000311Pum210097.844Mesocricetus_auratus
ENSSSCG00000008600PUM210099.061ENSMICG00000011647PUM210099.061Microcebus_murinus
ENSSSCG00000008600PUM210098.028ENSMOCG00000013663Pum210098.028Microtus_ochrogaster
ENSSSCG00000008600PUM210078.261ENSMMOG00000002975pum210074.793Mola_mola
ENSSSCG00000008600PUM29993.231ENSMODG00000009811PUM210090.503Monodelphis_domestica
ENSSSCG00000008600PUM29590.954ENSMALG00000022313pum29982.143Monopterus_albus
ENSSSCG00000008600PUM210097.746MGP_CAROLIEiJ_G0017603Pum29999.515Mus_caroli
ENSSSCG00000008600PUM210097.746ENSMUSG00000020594Pum29999.757Mus_musculus
ENSSSCG00000008600PUM210097.842MGP_PahariEiJ_G0029361Pum299100.000Mus_pahari
ENSSSCG00000008600PUM210097.746MGP_SPRETEiJ_G0018447Pum29999.757Mus_spretus
ENSSSCG00000008600PUM210099.341ENSMPUG00000013734PUM210099.341Mustela_putorius_furo
ENSSSCG00000008600PUM210098.404ENSMLUG00000007362PUM210098.404Myotis_lucifugus
ENSSSCG00000008600PUM210098.307ENSNGAG00000016665-10098.307Nannospalax_galili
ENSSSCG00000008600PUM29966.405ENSNGAG00000016239-9970.698Nannospalax_galili
ENSSSCG00000008600PUM210066.993ENSNBRG00000020737pum210066.002Neolamprologus_brichardi
ENSSSCG00000008600PUM210098.592ENSNLEG00000002509PUM299100.000Nomascus_leucogenys
ENSSSCG00000008600PUM29991.385ENSMEUG00000016567PUM29390.141Notamacropus_eugenii
ENSSSCG00000008600PUM27688.143ENSOPRG00000001963PUM210077.790Ochotona_princeps
ENSSSCG00000008600PUM210097.840ENSODEG00000007823PUM210097.840Octodon_degus
ENSSSCG00000008600PUM210078.140ENSONIG00000006119pum29076.199Oreochromis_niloticus
ENSSSCG00000008600PUM210098.405ENSOCUG00000017908PUM210098.405Oryctolagus_cuniculus
ENSSSCG00000008600PUM29590.931ENSORLG00000012611pum29590.777Oryzias_latipes
ENSSSCG00000008600PUM29590.931ENSORLG00020014452pum29980.533Oryzias_latipes_hni
ENSSSCG00000008600PUM210078.605ENSORLG00015009427pum29074.537Oryzias_latipes_hsok
ENSSSCG00000008600PUM210083.403ENSOMEG00000005889pum29982.143Oryzias_melastigma
ENSSSCG00000008600PUM29898.093ENSOGAG00000002187PUM29999.730Otolemur_garnettii
ENSSSCG00000008600PUM210099.343ENSOARG00000017236PUM210099.343Ovis_aries
ENSSSCG00000008600PUM210098.592ENSPPAG00000023095PUM299100.000Pan_paniscus
ENSSSCG00000008600PUM210099.153ENSPPRG00000021443PUM210099.153Panthera_pardus
ENSSSCG00000008600PUM210099.153ENSPTIG00000018982PUM210099.153Panthera_tigris_altaica
ENSSSCG00000008600PUM210098.592ENSPTRG00000011692PUM299100.000Pan_troglodytes
ENSSSCG00000008600PUM210092.775ENSPANG00000009393PUM2100100.000Papio_anubis
ENSSSCG00000008600PUM210072.435ENSPKIG00000023195pum29983.051Paramormyrops_kingsleyae
ENSSSCG00000008600PUM210094.246ENSPSIG00000011626PUM28892.864Pelodiscus_sinensis
ENSSSCG00000008600PUM29590.709ENSPMGG00000016123pum210075.375Periophthalmus_magnuspinnatus
ENSSSCG00000008600PUM210097.467ENSPEMG00000008357Pum210097.467Peromyscus_maniculatus_bairdii
ENSSSCG00000008600PUM210074.810ENSPMAG00000007038pum29384.856Petromyzon_marinus
ENSSSCG00000008600PUM29991.385ENSPCIG00000022139PUM29994.417Phascolarctos_cinereus
ENSSSCG00000008600PUM210076.532ENSPFOG00000019208pum29074.435Poecilia_formosa
ENSSSCG00000008600PUM29691.463ENSPLAG00000001826pum210082.180Poecilia_latipinna
ENSSSCG00000008600PUM210079.225ENSPMEG00000015766pum29076.085Poecilia_mexicana
ENSSSCG00000008600PUM29191.707ENSPREG00000006905pum210082.390Poecilia_reticulata
ENSSSCG00000008600PUM210098.779ENSPPYG00000012617PUM210098.779Pongo_abelii
ENSSSCG00000008600PUM276100.000ENSPCAG00000008001PUM270100.000Procavia_capensis
ENSSSCG00000008600PUM210099.032ENSPCOG00000019636PUM210099.074Propithecus_coquereli
ENSSSCG00000008600PUM210097.255ENSPVAG00000002920PUM210093.416Pteropus_vampyrus
ENSSSCG00000008600PUM210077.898ENSPNYG00000022901pum28975.967Pundamilia_nyererei
ENSSSCG00000008600PUM29877.310ENSPNAG00000008025pum210074.510Pygocentrus_nattereri
ENSSSCG00000008600PUM210097.467ENSRNOG00000006180Pum29999.272Rattus_norvegicus
ENSSSCG00000008600PUM210098.498ENSRBIG00000044880PUM299100.000Rhinopithecus_bieti
ENSSSCG00000008600PUM210098.515ENSSBOG00000022007PUM299100.000Saimiri_boliviensis_boliviensis
ENSSSCG00000008600PUM210092.308ENSSHAG00000002778PUM210089.299Sarcophilus_harrisii
ENSSSCG00000008600PUM29286.985ENSSFOG00015003476pum28091.803Scleropages_formosus
ENSSSCG00000008600PUM210077.932ENSSMAG00000018236pum210066.452Scophthalmus_maximus
ENSSSCG00000008600PUM29473.526ENSSDUG00000001800pum28775.979Seriola_dumerili
ENSSSCG00000008600PUM210078.207ENSSLDG00000000981pum29076.037Seriola_lalandi_dorsalis
ENSSSCG00000008600PUM29691.379ENSSARG00000010992PUM28691.096Sorex_araneus
ENSSSCG00000008600PUM210093.954ENSSPUG00000017012PUM29992.607Sphenodon_punctatus
ENSSSCG00000008600PUM210091.198ENSSPAG00000022948pum29981.723Stegastes_partitus
ENSSSCG00000008600PUM210094.868ENSTGUG00000013149PUM210093.521Taeniopygia_guttata
ENSSSCG00000008600PUM210078.727ENSTRUG00000018167pum28379.095Takifugu_rubripes
ENSSSCG00000008600PUM29977.434ENSTNIG00000003116pum29074.747Tetraodon_nigroviridis
ENSSSCG00000008600PUM28699.187ENSTBEG00000008729PUM28699.187Tupaia_belangeri
ENSSSCG00000008600PUM210098.873ENSTTRG00000004887PUM210098.873Tursiops_truncatus
ENSSSCG00000008600PUM27699.092ENSUAMG00000008120PUM29899.275Ursus_americanus
ENSSSCG00000008600PUM210099.341ENSUMAG00000023198PUM210099.341Ursus_maritimus
ENSSSCG00000008600PUM210099.248ENSVPAG00000005056PUM210099.248Vicugna_pacos
ENSSSCG00000008600PUM210099.436ENSVVUG00000014829PUM210099.436Vulpes_vulpes
ENSSSCG00000008600PUM210086.533ENSXETG00000008903pum29081.157Xenopus_tropicalis
ENSSSCG00000008600PUM29473.963ENSXCOG00000002556pum28776.319Xiphophorus_couchianus
ENSSSCG00000008600PUM29691.463ENSXMAG00000017682pum210082.180Xiphophorus_maculatus

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