EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000008619 (Gene tree)
Gene ID: 100627404
Gene Symbol: DDX1
Alias: DBP-RB
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 34810 bases
Position: chr3:121821792-121856601
Accession: 100627404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009188	DEAD	PF00270.29	8.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009430	DDX1-201	2472	XM_021087822	ENSSSCP00000009188	739 (aa)	XP_020943481	F1SCS1

Gene Model

Click here to download ENSSSCG00000008619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000008619	DDX1	53	40.909	ENSSSCG00000025329	DDX49	72	40.909
ENSSSCG00000008619	DDX1	53	40.678	ENSSSCG00000015097	DDX6	69	40.678
ENSSSCG00000008619	DDX1	60	31.405	ENSSSCG00000026038	DDX28	70	31.405
ENSSSCG00000008619	DDX1	53	48.333	ENSSSCG00000033149	DDX47	76	48.333
ENSSSCG00000008619	DDX1	54	42.857	ENSSSCG00000021275	DDX52	58	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008619	DDX1	100	97.568	ENSG00000079785	DDX1	100	97.568	Homo_sapiens
ENSSSCG00000008619	DDX1	100	84.324	ENSAPOG00000003166	ddx1	100	84.324	Acanthochromis_polyacanthus
ENSSSCG00000008619	DDX1	99	98.647	ENSAMEG00000001071	DDX1	99	98.647	Ailuropoda_melanoleuca
ENSSSCG00000008619	DDX1	88	83.053	ENSACIG00000017422	ddx1	99	82.443	Amphilophus_citrinellus
ENSSSCG00000008619	DDX1	89	82.523	ENSAOCG00000015436	ddx1	94	84.119	Amphiprion_ocellaris
ENSSSCG00000008619	DDX1	100	85.270	ENSAPEG00000007699	ddx1	100	85.270	Amphiprion_percula
ENSSSCG00000008619	DDX1	94	84.241	ENSATEG00000003965	ddx1	98	83.817	Anabas_testudineus
ENSSSCG00000008619	DDX1	100	92.608	ENSAPLG00000011093	DDX1	100	92.608	Anas_platyrhynchos
ENSSSCG00000008619	DDX1	94	91.117	ENSACAG00000011036	DDX1	99	91.117	Anolis_carolinensis
ENSSSCG00000008619	DDX1	100	97.297	ENSANAG00000037912	DDX1	100	97.297	Aotus_nancymaae
ENSSSCG00000008619	DDX1	99	84.261	ENSACLG00000008850	ddx1	99	83.333	Astatotilapia_calliptera
ENSSSCG00000008619	DDX1	100	84.189	ENSAMXG00000002100	ddx1	100	84.189	Astyanax_mexicanus
ENSSSCG00000008619	DDX1	100	98.649	ENSBTAG00000009906	DDX1	100	98.649	Bos_taurus
ENSSSCG00000008619	DDX1	98	47.849	WBGene00021938	Y55F3BR.1	98	47.849	Caenorhabditis_elegans
ENSSSCG00000008619	DDX1	100	97.297	ENSCJAG00000007076	DDX1	100	97.297	Callithrix_jacchus
ENSSSCG00000008619	DDX1	100	98.649	ENSCAFG00000003686	DDX1	100	98.649	Canis_familiaris
ENSSSCG00000008619	DDX1	100	98.649	ENSCAFG00020026083	DDX1	100	98.649	Canis_lupus_dingo
ENSSSCG00000008619	DDX1	100	98.378	ENSCHIG00000011046	DDX1	100	98.378	Capra_hircus
ENSSSCG00000008619	DDX1	100	97.568	ENSTSYG00000002477	-	100	97.568	Carlito_syrichta
ENSSSCG00000008619	DDX1	99	70.014	ENSTSYG00000037396	-	98	73.374	Carlito_syrichta
ENSSSCG00000008619	DDX1	86	77.294	ENSCAPG00000008906	-	93	77.294	Cavia_aperea
ENSSSCG00000008619	DDX1	68	95.219	ENSCPOG00000032467	-	100	95.219	Cavia_porcellus
ENSSSCG00000008619	DDX1	88	94.028	ENSCPOG00000009816	-	96	94.028	Cavia_porcellus
ENSSSCG00000008619	DDX1	100	97.297	ENSCCAG00000030085	DDX1	100	97.297	Cebus_capucinus
ENSSSCG00000008619	DDX1	100	97.703	ENSCATG00000033924	DDX1	100	97.703	Cercocebus_atys
ENSSSCG00000008619	DDX1	100	96.757	ENSCLAG00000005434	DDX1	100	96.757	Chinchilla_lanigera
ENSSSCG00000008619	DDX1	100	97.703	ENSCSAG00000007883	DDX1	100	97.703	Chlorocebus_sabaeus
ENSSSCG00000008619	DDX1	73	98.812	ENSCHOG00000002171	DDX1	74	98.812	Choloepus_hoffmanni
ENSSSCG00000008619	DDX1	99	87.500	ENSCPBG00000013330	DDX1	99	92.593	Chrysemys_picta_bellii
ENSSSCG00000008619	DDX1	100	65.416	ENSCING00000001176	-	100	65.241	Ciona_intestinalis
ENSSSCG00000008619	DDX1	98	60.027	ENSCSAVG00000003028	-	99	60.027	Ciona_savignyi
ENSSSCG00000008619	DDX1	100	97.568	ENSCANG00000031530	DDX1	100	97.568	Colobus_angolensis_palliatus
ENSSSCG00000008619	DDX1	100	97.162	ENSCGRG00001013025	Ddx1	100	97.162	Cricetulus_griseus_chok1gshd
ENSSSCG00000008619	DDX1	100	97.162	ENSCGRG00000000676	Ddx1	100	97.162	Cricetulus_griseus_crigri
ENSSSCG00000008619	DDX1	99	84.332	ENSCSEG00000002630	ddx1	100	84.332	Cynoglossus_semilaevis
ENSSSCG00000008619	DDX1	99	83.787	ENSCVAG00000020927	ddx1	100	83.787	Cyprinodon_variegatus
ENSSSCG00000008619	DDX1	100	84.459	ENSDARG00000032117	ddx1	100	84.469	Danio_rerio
ENSSSCG00000008619	DDX1	100	97.838	ENSDNOG00000006905	DDX1	100	97.838	Dasypus_novemcinctus
ENSSSCG00000008619	DDX1	100	97.432	ENSDORG00000012847	Ddx1	100	97.432	Dipodomys_ordii
ENSSSCG00000008619	DDX1	98	59.371	FBgn0015075	Ddx1	99	59.918	Drosophila_melanogaster
ENSSSCG00000008619	DDX1	100	86.351	ENSETEG00000014259	DDX1	100	86.351	Echinops_telfairi
ENSSSCG00000008619	DDX1	64	78.178	ENSEBUG00000009800	-	99	78.178	Eptatretus_burgeri
ENSSSCG00000008619	DDX1	100	98.378	ENSEASG00005009335	DDX1	92	98.378	Equus_asinus_asinus
ENSSSCG00000008619	DDX1	94	98.422	ENSECAG00000016396	DDX1	100	98.422	Equus_caballus
ENSSSCG00000008619	DDX1	88	93.785	ENSEEUG00000001606	DDX1	89	93.785	Erinaceus_europaeus
ENSSSCG00000008619	DDX1	100	82.186	ENSELUG00000006743	ddx1	100	82.186	Esox_lucius
ENSSSCG00000008619	DDX1	100	98.514	ENSFCAG00000004680	DDX1	100	98.514	Felis_catus
ENSSSCG00000008619	DDX1	100	92.432	ENSFALG00000008696	DDX1	100	92.432	Ficedula_albicollis
ENSSSCG00000008619	DDX1	100	96.486	ENSFDAG00000021305	DDX1	100	96.486	Fukomys_damarensis
ENSSSCG00000008619	DDX1	100	82.973	ENSFHEG00000008444	ddx1	100	82.973	Fundulus_heteroclitus
ENSSSCG00000008619	DDX1	100	81.427	ENSGMOG00000011300	ddx1	100	81.427	Gadus_morhua
ENSSSCG00000008619	DDX1	100	93.514	ENSGALG00000016461	DDX1	100	93.514	Gallus_gallus
ENSSSCG00000008619	DDX1	100	83.919	ENSGAFG00000004706	ddx1	100	83.919	Gambusia_affinis
ENSSSCG00000008619	DDX1	100	82.297	ENSGACG00000011162	ddx1	100	82.297	Gasterosteus_aculeatus
ENSSSCG00000008619	DDX1	100	93.378	ENSGAGG00000021020	DDX1	100	93.378	Gopherus_agassizii
ENSSSCG00000008619	DDX1	100	97.568	ENSGGOG00000012482	DDX1	100	97.568	Gorilla_gorilla
ENSSSCG00000008619	DDX1	100	84.189	ENSHBUG00000014069	ddx1	100	84.189	Haplochromis_burtoni
ENSSSCG00000008619	DDX1	100	97.027	ENSHGLG00000000801	DDX1	100	97.027	Heterocephalus_glaber_female
ENSSSCG00000008619	DDX1	99	97.003	ENSHGLG00100000711	DDX1	100	97.003	Heterocephalus_glaber_male
ENSSSCG00000008619	DDX1	100	84.189	ENSHCOG00000011492	ddx1	96	84.189	Hippocampus_comes
ENSSSCG00000008619	DDX1	100	82.838	ENSIPUG00000003494	ddx1	100	82.838	Ictalurus_punctatus
ENSSSCG00000008619	DDX1	99	97.684	ENSSTOG00000003977	DDX1	100	97.684	Ictidomys_tridecemlineatus
ENSSSCG00000008619	DDX1	88	93.130	ENSJJAG00000013315	Ddx1	100	93.130	Jaculus_jaculus
ENSSSCG00000008619	DDX1	100	85.270	ENSKMAG00000011340	ddx1	100	85.270	Kryptolebias_marmoratus
ENSSSCG00000008619	DDX1	88	78.473	ENSLBEG00000008692	ddx1	99	78.287	Labrus_bergylta
ENSSSCG00000008619	DDX1	100	87.432	ENSLACG00000010529	DDX1	100	87.432	Latimeria_chalumnae
ENSSSCG00000008619	DDX1	100	87.265	ENSLOCG00000016473	ddx1	100	87.265	Lepisosteus_oculatus
ENSSSCG00000008619	DDX1	99	97.015	ENSLAFG00000002213	DDX1	99	97.015	Loxodonta_africana
ENSSSCG00000008619	DDX1	100	97.703	ENSMFAG00000033987	DDX1	100	97.703	Macaca_fascicularis
ENSSSCG00000008619	DDX1	100	97.703	ENSMMUG00000023437	DDX1	100	97.703	Macaca_mulatta
ENSSSCG00000008619	DDX1	100	97.703	ENSMNEG00000029189	DDX1	100	97.703	Macaca_nemestrina
ENSSSCG00000008619	DDX1	100	97.703	ENSMLEG00000030787	DDX1	100	97.703	Mandrillus_leucophaeus
ENSSSCG00000008619	DDX1	100	84.595	ENSMAMG00000015916	ddx1	100	84.595	Mastacembelus_armatus
ENSSSCG00000008619	DDX1	99	84.261	ENSMZEG00005015207	ddx1	99	83.333	Maylandia_zebra
ENSSSCG00000008619	DDX1	99	89.431	ENSMGAG00000014025	DDX1	100	89.431	Meleagris_gallopavo
ENSSSCG00000008619	DDX1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSSSCG00000008619	DDX1	100	97.568	ENSMICG00000001023	DDX1	100	97.568	Microcebus_murinus
ENSSSCG00000008619	DDX1	100	97.162	ENSMOCG00000000257	Ddx1	100	97.162	Microtus_ochrogaster
ENSSSCG00000008619	DDX1	89	82.622	ENSMMOG00000015397	ddx1	99	82.622	Mola_mola
ENSSSCG00000008619	DDX1	99	95.251	ENSMODG00000010275	DDX1	99	95.251	Monodelphis_domestica
ENSSSCG00000008619	DDX1	100	84.595	ENSMALG00000016409	ddx1	100	84.595	Monopterus_albus
ENSSSCG00000008619	DDX1	100	97.297	MGP_CAROLIEiJ_G0017622	Ddx1	100	97.297	Mus_caroli
ENSSSCG00000008619	DDX1	100	96.892	ENSMUSG00000037149	Ddx1	100	96.892	Mus_musculus
ENSSSCG00000008619	DDX1	100	97.297	MGP_PahariEiJ_G0029378	Ddx1	100	97.297	Mus_pahari
ENSSSCG00000008619	DDX1	100	96.892	MGP_SPRETEiJ_G0018464	Ddx1	100	96.892	Mus_spretus
ENSSSCG00000008619	DDX1	100	98.649	ENSMPUG00000013606	DDX1	100	98.649	Mustela_putorius_furo
ENSSSCG00000008619	DDX1	99	97.962	ENSMLUG00000003027	DDX1	98	97.962	Myotis_lucifugus
ENSSSCG00000008619	DDX1	99	97.411	ENSNGAG00000015783	Ddx1	100	97.411	Nannospalax_galili
ENSSSCG00000008619	DDX1	78	79.758	ENSNBRG00000020677	ddx1	94	79.758	Neolamprologus_brichardi
ENSSSCG00000008619	DDX1	100	97.703	ENSNLEG00000014417	DDX1	100	97.703	Nomascus_leucogenys
ENSSSCG00000008619	DDX1	99	93.023	ENSMEUG00000008254	DDX1	99	93.023	Notamacropus_eugenii
ENSSSCG00000008619	DDX1	92	82.109	ENSOPRG00000004290	DDX1	100	68.919	Ochotona_princeps
ENSSSCG00000008619	DDX1	100	96.892	ENSODEG00000000569	DDX1	100	96.892	Octodon_degus
ENSSSCG00000008619	DDX1	100	84.750	ENSONIG00000000513	ddx1	100	84.750	Oreochromis_niloticus
ENSSSCG00000008619	DDX1	75	92.652	ENSOANG00000005450	DDX1	99	92.652	Ornithorhynchus_anatinus
ENSSSCG00000008619	DDX1	100	97.432	ENSOCUG00000007010	DDX1	100	97.432	Oryctolagus_cuniculus
ENSSSCG00000008619	DDX1	100	84.459	ENSORLG00000016709	ddx1	100	84.459	Oryzias_latipes
ENSSSCG00000008619	DDX1	99	84.196	ENSORLG00020003290	ddx1	100	84.196	Oryzias_latipes_hni
ENSSSCG00000008619	DDX1	100	84.054	ENSORLG00015022438	ddx1	100	84.054	Oryzias_latipes_hsok
ENSSSCG00000008619	DDX1	100	79.730	ENSOMEG00000017620	ddx1	100	78.243	Oryzias_melastigma
ENSSSCG00000008619	DDX1	99	97.418	ENSOGAG00000008730	DDX1	100	97.418	Otolemur_garnettii
ENSSSCG00000008619	DDX1	99	98.098	ENSOARG00000016369	DDX1	100	98.098	Ovis_aries
ENSSSCG00000008619	DDX1	100	97.432	ENSPPAG00000027432	DDX1	100	97.432	Pan_paniscus
ENSSSCG00000008619	DDX1	100	98.514	ENSPPRG00000020556	DDX1	100	98.514	Panthera_pardus
ENSSSCG00000008619	DDX1	100	98.378	ENSPTIG00000008267	DDX1	100	98.378	Panthera_tigris_altaica
ENSSSCG00000008619	DDX1	100	97.432	ENSPTRG00000011670	DDX1	100	97.432	Pan_troglodytes
ENSSSCG00000008619	DDX1	100	97.568	ENSPANG00000025185	DDX1	100	97.568	Papio_anubis
ENSSSCG00000008619	DDX1	100	83.514	ENSPKIG00000012466	ddx1	100	83.651	Paramormyrops_kingsleyae
ENSSSCG00000008619	DDX1	54	91.067	ENSPSIG00000012292	DDX1	100	91.067	Pelodiscus_sinensis
ENSSSCG00000008619	DDX1	100	81.757	ENSPMGG00000000782	ddx1	100	80.270	Periophthalmus_magnuspinnatus
ENSSSCG00000008619	DDX1	100	96.622	ENSPEMG00000016389	Ddx1	100	96.622	Peromyscus_maniculatus_bairdii
ENSSSCG00000008619	DDX1	99	79.212	ENSPMAG00000009118	-	100	79.212	Petromyzon_marinus
ENSSSCG00000008619	DDX1	100	95.946	ENSPCIG00000010941	DDX1	100	95.946	Phascolarctos_cinereus
ENSSSCG00000008619	DDX1	100	83.784	ENSPFOG00000011921	ddx1	100	83.784	Poecilia_formosa
ENSSSCG00000008619	DDX1	86	82.271	ENSPFOG00000006873	-	100	82.271	Poecilia_formosa
ENSSSCG00000008619	DDX1	100	83.514	ENSPLAG00000005939	ddx1	100	83.514	Poecilia_latipinna
ENSSSCG00000008619	DDX1	100	84.054	ENSPMEG00000011140	ddx1	100	84.054	Poecilia_mexicana
ENSSSCG00000008619	DDX1	100	83.649	ENSPREG00000011751	ddx1	100	83.649	Poecilia_reticulata
ENSSSCG00000008619	DDX1	100	97.568	ENSPPYG00000012638	DDX1	100	97.568	Pongo_abelii
ENSSSCG00000008619	DDX1	100	83.649	ENSPCAG00000001491	DDX1	100	83.649	Procavia_capensis
ENSSSCG00000008619	DDX1	99	95.368	ENSPCOG00000028185	DDX1	99	95.368	Propithecus_coquereli
ENSSSCG00000008619	DDX1	100	97.838	ENSPVAG00000013618	DDX1	100	97.838	Pteropus_vampyrus
ENSSSCG00000008619	DDX1	100	84.189	ENSPNYG00000013839	ddx1	100	84.189	Pundamilia_nyererei
ENSSSCG00000008619	DDX1	88	82.901	ENSPNAG00000017033	ddx1	97	82.901	Pygocentrus_nattereri
ENSSSCG00000008619	DDX1	100	97.432	ENSRNOG00000006652	Ddx1	100	97.432	Rattus_norvegicus
ENSSSCG00000008619	DDX1	100	96.486	ENSRBIG00000041664	DDX1	100	96.960	Rhinopithecus_bieti
ENSSSCG00000008619	DDX1	100	97.297	ENSRROG00000031167	DDX1	100	97.297	Rhinopithecus_roxellana
ENSSSCG00000008619	DDX1	100	97.432	ENSSBOG00000027577	DDX1	100	97.432	Saimiri_boliviensis_boliviensis
ENSSSCG00000008619	DDX1	99	86.974	ENSSHAG00000009363	DDX1	99	86.974	Sarcophilus_harrisii
ENSSSCG00000008619	DDX1	100	83.108	ENSSFOG00015014476	ddx1	100	83.108	Scleropages_formosus
ENSSSCG00000008619	DDX1	100	82.568	ENSSMAG00000010094	ddx1	100	82.568	Scophthalmus_maximus
ENSSSCG00000008619	DDX1	100	84.595	ENSSDUG00000012334	ddx1	100	84.595	Seriola_dumerili
ENSSSCG00000008619	DDX1	100	84.189	ENSSLDG00000025345	ddx1	100	84.189	Seriola_lalandi_dorsalis
ENSSSCG00000008619	DDX1	99	86.376	ENSSARG00000004536	DDX1	100	86.376	Sorex_araneus
ENSSSCG00000008619	DDX1	100	90.541	ENSSPUG00000018835	DDX1	100	90.541	Sphenodon_punctatus
ENSSSCG00000008619	DDX1	100	79.459	ENSSPAG00000023554	ddx1	100	79.459	Stegastes_partitus
ENSSSCG00000008619	DDX1	100	92.432	ENSTGUG00000013096	DDX1	100	92.432	Taeniopygia_guttata
ENSSSCG00000008619	DDX1	99	83.875	ENSTRUG00000015765	ddx1	99	83.875	Takifugu_rubripes
ENSSSCG00000008619	DDX1	100	83.919	ENSTNIG00000016309	ddx1	100	83.919	Tetraodon_nigroviridis
ENSSSCG00000008619	DDX1	99	93.188	ENSTBEG00000008454	DDX1	100	93.188	Tupaia_belangeri
ENSSSCG00000008619	DDX1	100	97.568	ENSTTRG00000005081	DDX1	100	97.568	Tursiops_truncatus
ENSSSCG00000008619	DDX1	71	86.200	ENSUAMG00000017375	DDX1	93	86.038	Ursus_americanus
ENSSSCG00000008619	DDX1	99	98.774	ENSUMAG00000023450	DDX1	100	98.774	Ursus_maritimus
ENSSSCG00000008619	DDX1	85	99.038	ENSVPAG00000007764	DDX1	85	99.038	Vicugna_pacos
ENSSSCG00000008619	DDX1	99	98.503	ENSVVUG00000013085	DDX1	96	98.503	Vulpes_vulpes
ENSSSCG00000008619	DDX1	100	89.730	ENSXETG00000017825	ddx1	100	89.730	Xenopus_tropicalis
ENSSSCG00000008619	DDX1	100	81.392	ENSXCOG00000007082	ddx1	100	81.392	Xiphophorus_couchianus
ENSSSCG00000008619	DDX1	100	84.054	ENSXMAG00000004555	ddx1	100	84.054	Xiphophorus_maculatus