EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008676 (Gene tree)
Gene ID: 100513605
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 15278 bases
Position: chr8:802940-818217
Accession: 100513605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009249	SLBP_RNA_bind	PF15247.6	6.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009493	SLBP-201	1777	-	ENSSSCP00000009249	275 (aa)	-	F1S9F2

Gene Model

Click here to download ENSSSCG00000008676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008676	SLBP	100	82.545	ENSG00000163950	SLBP	100	81.818	Homo_sapiens
ENSSSCG00000008676	SLBP	84	49.808	ENSAPOG00000004953	slbp	76	55.093	Acanthochromis_polyacanthus
ENSSSCG00000008676	SLBP	79	90.323	ENSAMEG00000016915	SLBP	100	90.323	Ailuropoda_melanoleuca
ENSSSCG00000008676	SLBP	82	53.469	ENSACIG00000022308	slbp	95	52.016	Amphilophus_citrinellus
ENSSSCG00000008676	SLBP	82	51.181	ENSAOCG00000024545	slbp	74	56.667	Amphiprion_ocellaris
ENSSSCG00000008676	SLBP	84	50.192	ENSAPEG00000017629	slbp	74	56.667	Amphiprion_percula
ENSSSCG00000008676	SLBP	84	50.575	ENSATEG00000016358	slbp	74	57.346	Anabas_testudineus
ENSSSCG00000008676	SLBP	79	78.636	ENSAPLG00000015989	-	100	77.273	Anas_platyrhynchos
ENSSSCG00000008676	SLBP	100	79.787	ENSANAG00000034769	SLBP	100	79.078	Aotus_nancymaae
ENSSSCG00000008676	SLBP	82	52.000	ENSACLG00000007036	-	91	49.213	Astatotilapia_calliptera
ENSSSCG00000008676	SLBP	83	56.967	ENSAMXG00000014527	slbp	74	64.677	Astyanax_mexicanus
ENSSSCG00000008676	SLBP	100	88.364	ENSBTAG00000001328	SLBP	100	88.364	Bos_taurus
ENSSSCG00000008676	SLBP	100	79.078	ENSCJAG00000001790	SLBP	100	79.078	Callithrix_jacchus
ENSSSCG00000008676	SLBP	100	89.091	ENSCAFG00000015016	SLBP	100	89.091	Canis_familiaris
ENSSSCG00000008676	SLBP	100	89.091	ENSCAFG00020012334	SLBP	100	89.091	Canis_lupus_dingo
ENSSSCG00000008676	SLBP	100	89.455	ENSCHIG00000019364	SLBP	100	89.455	Capra_hircus
ENSSSCG00000008676	SLBP	100	82.182	ENSTSYG00000000376	SLBP	100	81.818	Carlito_syrichta
ENSSSCG00000008676	SLBP	66	86.188	ENSCAPG00000016340	SLBP	100	86.188	Cavia_aperea
ENSSSCG00000008676	SLBP	100	81.362	ENSCPOG00000000031	SLBP	100	81.362	Cavia_porcellus
ENSSSCG00000008676	SLBP	60	80.952	ENSCCAG00000026134	SLBP	85	79.048	Cebus_capucinus
ENSSSCG00000008676	SLBP	100	82.545	ENSCATG00000029173	SLBP	100	81.818	Cercocebus_atys
ENSSSCG00000008676	SLBP	100	82.909	ENSCLAG00000008157	SLBP	100	82.909	Chinchilla_lanigera
ENSSSCG00000008676	SLBP	100	69.643	ENSCSAG00000015628	SLBP	100	69.014	Chlorocebus_sabaeus
ENSSSCG00000008676	SLBP	100	69.858	ENSCPBG00000000746	SLBP	100	71.127	Chrysemys_picta_bellii
ENSSSCG00000008676	SLBP	79	85.648	ENSCANG00000041008	SLBP	100	84.722	Colobus_angolensis_palliatus
ENSSSCG00000008676	SLBP	100	84.000	ENSCGRG00001009760	-	100	84.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000008676	SLBP	100	81.455	ENSCGRG00001012991	-	100	81.455	Cricetulus_griseus_chok1gshd
ENSSSCG00000008676	SLBP	100	84.000	ENSCGRG00000004506	Slbp	100	84.000	Cricetulus_griseus_crigri
ENSSSCG00000008676	SLBP	85	52.529	ENSCSEG00000020337	-	78	58.333	Cynoglossus_semilaevis
ENSSSCG00000008676	SLBP	84	51.613	ENSCVAG00000019592	-	89	47.059	Cyprinodon_variegatus
ENSSSCG00000008676	SLBP	83	55.144	ENSDARG00000100558	slbp	66	61.000	Danio_rerio
ENSSSCG00000008676	SLBP	100	77.465	ENSDNOG00000047539	SLBP	100	77.465	Dasypus_novemcinctus
ENSSSCG00000008676	SLBP	79	88.426	ENSDORG00000003028	Slbp	100	88.426	Dipodomys_ordii
ENSSSCG00000008676	SLBP	86	76.151	ENSETEG00000004641	SLBP	99	76.151	Echinops_telfairi
ENSSSCG00000008676	SLBP	70	89.583	ENSEASG00005022714	SLBP	100	89.583	Equus_asinus_asinus
ENSSSCG00000008676	SLBP	77	90.521	ENSECAG00000011689	SLBP	69	90.521	Equus_caballus
ENSSSCG00000008676	SLBP	84	47.619	ENSELUG00000012854	slbp	99	48.375	Esox_lucius
ENSSSCG00000008676	SLBP	100	91.636	ENSFCAG00000000169	SLBP	100	91.636	Felis_catus
ENSSSCG00000008676	SLBP	100	68.085	ENSFALG00000010003	-	100	67.021	Ficedula_albicollis
ENSSSCG00000008676	SLBP	92	86.220	ENSFDAG00000007592	SLBP	99	86.220	Fukomys_damarensis
ENSSSCG00000008676	SLBP	84	49.603	ENSFHEG00000007497	slbp	77	51.691	Fundulus_heteroclitus
ENSSSCG00000008676	SLBP	53	70.000	ENSGMOG00000015352	slbp	96	70.000	Gadus_morhua
ENSSSCG00000008676	SLBP	100	68.683	ENSGALG00000015712	SLBP	100	69.751	Gallus_gallus
ENSSSCG00000008676	SLBP	84	51.383	ENSGAFG00000019577	slbp	77	57.426	Gambusia_affinis
ENSSSCG00000008676	SLBP	89	49.612	ENSGACG00000019596	slbp	98	49.020	Gasterosteus_aculeatus
ENSSSCG00000008676	SLBP	86	68.980	ENSGAGG00000012096	SLBP	91	71.053	Gopherus_agassizii
ENSSSCG00000008676	SLBP	100	82.545	ENSGGOG00000003167	SLBP	100	81.818	Gorilla_gorilla
ENSSSCG00000008676	SLBP	82	51.779	ENSHBUG00000003338	-	91	49.213	Haplochromis_burtoni
ENSSSCG00000008676	SLBP	90	75.100	ENSHGLG00000008313	-	100	71.014	Heterocephalus_glaber_female
ENSSSCG00000008676	SLBP	100	74.545	ENSHGLG00000005955	-	100	74.545	Heterocephalus_glaber_female
ENSSSCG00000008676	SLBP	85	76.496	ENSHGLG00000010461	-	96	76.923	Heterocephalus_glaber_female
ENSSSCG00000008676	SLBP	100	83.273	ENSHGLG00100014018	-	100	83.273	Heterocephalus_glaber_male
ENSSSCG00000008676	SLBP	90	75.904	ENSHGLG00100010510	-	100	71.739	Heterocephalus_glaber_male
ENSSSCG00000008676	SLBP	85	76.496	ENSHGLG00100014906	-	96	76.923	Heterocephalus_glaber_male
ENSSSCG00000008676	SLBP	84	50.794	ENSHCOG00000013425	slbp	71	57.360	Hippocampus_comes
ENSSSCG00000008676	SLBP	70	64.796	ENSIPUG00000016780	slbp	74	65.306	Ictalurus_punctatus
ENSSSCG00000008676	SLBP	100	86.182	ENSSTOG00000003262	SLBP	100	86.182	Ictidomys_tridecemlineatus
ENSSSCG00000008676	SLBP	100	84.364	ENSJJAG00000020549	-	100	84.364	Jaculus_jaculus
ENSSSCG00000008676	SLBP	100	84.000	ENSJJAG00000002394	-	100	83.273	Jaculus_jaculus
ENSSSCG00000008676	SLBP	84	50.385	ENSKMAG00000008187	slbp	80	53.982	Kryptolebias_marmoratus
ENSSSCG00000008676	SLBP	84	52.941	ENSLBEG00000024709	slbp	73	54.680	Labrus_bergylta
ENSSSCG00000008676	SLBP	95	52.941	ENSLACG00000014623	SLBP	97	52.941	Latimeria_chalumnae
ENSSSCG00000008676	SLBP	92	51.449	ENSLOCG00000011027	slbp	92	52.174	Lepisosteus_oculatus
ENSSSCG00000008676	SLBP	86	80.085	ENSLAFG00000012933	SLBP	100	80.085	Loxodonta_africana
ENSSSCG00000008676	SLBP	91	83.267	ENSMFAG00000030130	SLBP	95	70.428	Macaca_fascicularis
ENSSSCG00000008676	SLBP	93	80.916	ENSMMUG00000032303	SLBP	96	85.253	Macaca_mulatta
ENSSSCG00000008676	SLBP	100	64.184	ENSMNEG00000008082	SLBP	100	63.475	Macaca_nemestrina
ENSSSCG00000008676	SLBP	93	76.471	ENSMLEG00000024639	SLBP	98	75.686	Mandrillus_leucophaeus
ENSSSCG00000008676	SLBP	81	49.600	ENSMAMG00000001046	-	88	49.200	Mastacembelus_armatus
ENSSSCG00000008676	SLBP	82	51.779	ENSMZEG00005017261	-	91	49.213	Maylandia_zebra
ENSSSCG00000008676	SLBP	79	77.880	ENSMGAG00000013085	SLBP	100	76.498	Meleagris_gallopavo
ENSSSCG00000008676	SLBP	100	84.727	ENSMAUG00000009490	Slbp	100	84.727	Mesocricetus_auratus
ENSSSCG00000008676	SLBP	100	81.818	ENSMICG00000014244	SLBP	100	81.455	Microcebus_murinus
ENSSSCG00000008676	SLBP	100	84.000	ENSMOCG00000015826	Slbp	99	85.308	Microtus_ochrogaster
ENSSSCG00000008676	SLBP	68	59.694	ENSMMOG00000010181	slbp	93	49.576	Mola_mola
ENSSSCG00000008676	SLBP	92	77.519	ENSMODG00000004304	SLBP	98	77.519	Monodelphis_domestica
ENSSSCG00000008676	SLBP	84	48.659	ENSMALG00000013883	-	54	55.238	Monopterus_albus
ENSSSCG00000008676	SLBP	100	85.455	MGP_CAROLIEiJ_G0027117	Slbp	100	85.455	Mus_caroli
ENSSSCG00000008676	SLBP	100	85.455	ENSMUSG00000004642	Slbp	100	85.455	Mus_musculus
ENSSSCG00000008676	SLBP	100	85.455	MGP_PahariEiJ_G0016901	Slbp	100	85.455	Mus_pahari
ENSSSCG00000008676	SLBP	100	85.455	MGP_SPRETEiJ_G0028113	Slbp	100	85.455	Mus_spretus
ENSSSCG00000008676	SLBP	67	89.130	ENSMPUG00000011139	SLBP	94	89.130	Mustela_putorius_furo
ENSSSCG00000008676	SLBP	79	84.404	ENSMLUG00000004425	SLBP	93	84.404	Myotis_lucifugus
ENSSSCG00000008676	SLBP	100	82.909	ENSNGAG00000020799	Slbp	100	82.909	Nannospalax_galili
ENSSSCG00000008676	SLBP	76	53.275	ENSNBRG00000006044	-	86	52.838	Neolamprologus_brichardi
ENSSSCG00000008676	SLBP	100	80.496	ENSNLEG00000000048	SLBP	100	79.787	Nomascus_leucogenys
ENSSSCG00000008676	SLBP	65	84.270	ENSMEUG00000002501	SLBP	100	84.270	Notamacropus_eugenii
ENSSSCG00000008676	SLBP	100	81.818	ENSODEG00000012641	SLBP	100	81.818	Octodon_degus
ENSSSCG00000008676	SLBP	82	52.569	ENSONIG00000017469	-	91	50.000	Oreochromis_niloticus
ENSSSCG00000008676	SLBP	79	82.949	ENSOANG00000014243	SLBP	95	82.949	Ornithorhynchus_anatinus
ENSSSCG00000008676	SLBP	71	56.931	ENSORLG00000024887	-	74	53.535	Oryzias_latipes
ENSSSCG00000008676	SLBP	71	57.921	ENSORLG00020007798	slbp	73	54.545	Oryzias_latipes_hni
ENSSSCG00000008676	SLBP	71	57.426	ENSORLG00015016656	slbp	73	54.040	Oryzias_latipes_hsok
ENSSSCG00000008676	SLBP	71	57.426	ENSOMEG00000010818	slbp	73	56.784	Oryzias_melastigma
ENSSSCG00000008676	SLBP	100	82.909	ENSOGAG00000009750	SLBP	100	82.545	Otolemur_garnettii
ENSSSCG00000008676	SLBP	79	90.323	ENSOARG00000016090	SLBP	100	90.323	Ovis_aries
ENSSSCG00000008676	SLBP	100	82.545	ENSPPAG00000033300	SLBP	100	81.818	Pan_paniscus
ENSSSCG00000008676	SLBP	91	90.400	ENSPPRG00000016897	SLBP	100	90.400	Panthera_pardus
ENSSSCG00000008676	SLBP	70	91.146	ENSPTIG00000015057	SLBP	100	91.146	Panthera_tigris_altaica
ENSSSCG00000008676	SLBP	100	82.182	ENSPTRG00000015832	SLBP	100	81.455	Pan_troglodytes
ENSSSCG00000008676	SLBP	100	78.521	ENSPANG00000004932	SLBP	100	77.817	Papio_anubis
ENSSSCG00000008676	SLBP	88	52.510	ENSPKIG00000006183	slbp	92	50.558	Paramormyrops_kingsleyae
ENSSSCG00000008676	SLBP	65	58.462	ENSPMGG00000017684	-	96	55.670	Periophthalmus_magnuspinnatus
ENSSSCG00000008676	SLBP	100	84.727	ENSPEMG00000018369	Slbp	100	84.727	Peromyscus_maniculatus_bairdii
ENSSSCG00000008676	SLBP	100	71.959	ENSPCIG00000013575	SLBP	86	71.959	Phascolarctos_cinereus
ENSSSCG00000008676	SLBP	84	51.383	ENSPFOG00000000462	slbp	73	57.426	Poecilia_formosa
ENSSSCG00000008676	SLBP	84	50.988	ENSPLAG00000008300	slbp	77	56.098	Poecilia_latipinna
ENSSSCG00000008676	SLBP	84	51.383	ENSPMEG00000020807	slbp	73	57.426	Poecilia_mexicana
ENSSSCG00000008676	SLBP	84	51.383	ENSPREG00000004561	slbp	73	57.426	Poecilia_reticulata
ENSSSCG00000008676	SLBP	100	81.818	ENSPPYG00000014529	SLBP	100	81.091	Pongo_abelii
ENSSSCG00000008676	SLBP	100	81.818	ENSPCOG00000017399	SLBP	100	81.455	Propithecus_coquereli
ENSSSCG00000008676	SLBP	100	79.636	ENSPVAG00000002807	SLBP	100	79.636	Pteropus_vampyrus
ENSSSCG00000008676	SLBP	82	51.779	ENSPNYG00000005451	-	91	49.213	Pundamilia_nyererei
ENSSSCG00000008676	SLBP	82	55.833	ENSPNAG00000018503	slbp	74	62.437	Pygocentrus_nattereri
ENSSSCG00000008676	SLBP	100	84.727	ENSRNOG00000037162	Slbp	100	84.727	Rattus_norvegicus
ENSSSCG00000008676	SLBP	100	82.545	ENSRBIG00000039159	SLBP	100	81.818	Rhinopithecus_bieti
ENSSSCG00000008676	SLBP	97	81.203	ENSRROG00000030081	SLBP	99	80.451	Rhinopithecus_roxellana
ENSSSCG00000008676	SLBP	70	84.896	ENSSBOG00000033897	SLBP	100	83.854	Saimiri_boliviensis_boliviensis
ENSSSCG00000008676	SLBP	100	71.380	ENSSHAG00000013939	SLBP	100	71.380	Sarcophilus_harrisii
ENSSSCG00000008676	SLBP	85	58.167	ENSSFOG00015019429	slbp	71	62.755	Scleropages_formosus
ENSSSCG00000008676	SLBP	76	51.477	ENSSMAG00000016028	-	82	51.709	Scophthalmus_maximus
ENSSSCG00000008676	SLBP	84	50.980	ENSSDUG00000000855	-	76	56.604	Seriola_dumerili
ENSSSCG00000008676	SLBP	72	40.284	ENSSLDG00000007554	-	65	39.810	Seriola_lalandi_dorsalis
ENSSSCG00000008676	SLBP	50	54.362	ENSSLDG00000022893	-	86	54.795	Seriola_lalandi_dorsalis
ENSSSCG00000008676	SLBP	92	66.535	ENSSPUG00000016007	SLBP	96	66.142	Sphenodon_punctatus
ENSSSCG00000008676	SLBP	87	49.815	ENSSPAG00000004021	slbp	86	54.709	Stegastes_partitus
ENSSSCG00000008676	SLBP	93	70.498	ENSTGUG00000010626	-	100	69.084	Taeniopygia_guttata
ENSSSCG00000008676	SLBP	85	50.588	ENSTRUG00000000688	slbp	75	53.623	Takifugu_rubripes
ENSSSCG00000008676	SLBP	83	48.583	ENSTNIG00000000484	-	77	52.000	Tetraodon_nigroviridis
ENSSSCG00000008676	SLBP	92	63.095	ENSTBEG00000004085	SLBP	99	63.095	Tupaia_belangeri
ENSSSCG00000008676	SLBP	65	85.393	ENSTTRG00000004010	-	100	85.393	Tursiops_truncatus
ENSSSCG00000008676	SLBP	79	91.204	ENSTTRG00000010901	-	100	91.204	Tursiops_truncatus
ENSSSCG00000008676	SLBP	100	87.726	ENSUAMG00000012990	SLBP	100	87.726	Ursus_americanus
ENSSSCG00000008676	SLBP	70	88.542	ENSUMAG00000006119	SLBP	100	88.542	Ursus_maritimus
ENSSSCG00000008676	SLBP	100	88.727	ENSVVUG00000015578	-	100	88.727	Vulpes_vulpes
ENSSSCG00000008676	SLBP	91	57.198	ENSXETG00000003876	slbp	94	59.690	Xenopus_tropicalis
ENSSSCG00000008676	SLBP	72	56.075	ENSXCOG00000008275	slbp	80	56.398	Xiphophorus_couchianus
ENSSSCG00000008676	SLBP	84	51.383	ENSXMAG00000001331	-	75	56.190	Xiphophorus_maculatus