EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000008796 (Gene tree)
Gene ID
100513606
Gene Symbol
RBM47
Alias
FLJ20273|NET18
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
182804 bases
Position
chr8:31507963-31690766
Accession
100513606
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000037026RRM_1PF00076.228.1e-3813
ENSSSCP00000037026RRM_1PF00076.228.1e-3823
ENSSSCP00000037026RRM_1PF00076.228.1e-3833
ENSSSCP00000009374RRM_1PF00076.228.3e-3813
ENSSSCP00000009374RRM_1PF00076.228.3e-3823
ENSSSCP00000009374RRM_1PF00076.228.3e-3833
ENSSSCP00000031338RRM_1PF00076.228.3e-3813
ENSSSCP00000031338RRM_1PF00076.228.3e-3823
ENSSSCP00000031338RRM_1PF00076.228.3e-3833
ENSSSCP00000040823RRM_1PF00076.228.3e-3813
ENSSSCP00000040823RRM_1PF00076.228.3e-3823
ENSSSCP00000040823RRM_1PF00076.228.3e-3833
ENSSSCP00000045165RRM_1PF00076.228.3e-3813
ENSSSCP00000045165RRM_1PF00076.228.3e-3823
ENSSSCP00000045165RRM_1PF00076.228.3e-3833
ENSSSCP00000052614RRM_1PF00076.228.3e-3813
ENSSSCP00000052614RRM_1PF00076.228.3e-3823
ENSSSCP00000052614RRM_1PF00076.228.3e-3833
ENSSSCP00000036911RRM_1PF00076.228.8e-3813
ENSSSCP00000036911RRM_1PF00076.228.8e-3823
ENSSSCP00000036911RRM_1PF00076.228.8e-3833
ENSSSCP00000049029RRM_1PF00076.221.2e-3713
ENSSSCP00000049029RRM_1PF00076.221.2e-3723
ENSSSCP00000049029RRM_1PF00076.221.2e-3733
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000057895RBM47-2024797XM_021101129ENSSSCP00000031338591 (aa)XP_020956788F1S4H0
ENSSSCT00000042292RBM47-2044752XM_005666610ENSSSCP00000036911590 (aa)XP_005666667A0A286ZZ51
ENSSSCT00000058222RBM47-2064867XM_021101126ENSSSCP00000052614591 (aa)XP_020956785F1S4H0
ENSSSCT00000056733RBM47-2035152XM_021101119ENSSSCP00000049029686 (aa)XP_020956778A0A287AY12
ENSSSCT00000009623RBM47-2082055-ENSSSCP00000009374591 (aa)-F1S4H0
ENSSSCT00000049553RBM47-2054575XM_021101124ENSSSCP00000045165591 (aa)XP_020956783F1S4H0
ENSSSCT00000053630RBM47-2074521XM_021101123ENSSSCP00000037026617 (aa)XP_020956782A0A286ZZW6
ENSSSCT00000053846RBM47-2014788XM_003128939ENSSSCP00000040823591 (aa)XP_003128987F1S4H0
Gene Model
Click here to download ENSSSCG00000008796's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008796's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000008796RBM475254.516ENSSSCG00000004294-9546.067
ENSSSCG00000008796RBM475470.886ENSSSCG00000008994RBM466274.000
ENSSSCG00000008796RBM477359.081ENSSSCG00000010431A1CF7459.031
ENSSSCG00000008796RBM475256.129ENSSSCG00000023761HNRNPR8545.614
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000008796RBM4710096.639ENSG00000163694RBM47100100.000Homo_sapiens
ENSSSCG00000008796RBM4710077.425ENSAPOG00000011062rbm4710081.746Acanthochromis_polyacanthus
ENSSSCG00000008796RBM4710096.482ENSAMEG00000009672RBM4710096.482Ailuropoda_melanoleuca
ENSSSCG00000008796RBM4710077.181ENSACIG00000011531rbm4710082.275Amphilophus_citrinellus
ENSSSCG00000008796RBM4710077.983ENSAOCG00000022245rbm4710081.746Amphiprion_ocellaris
ENSSSCG00000008796RBM4710077.983ENSAPEG00000018304rbm4710081.746Amphiprion_percula
ENSSSCG00000008796RBM4710077.213ENSATEG00000018400rbm479484.916Anabas_testudineus
ENSSSCG00000008796RBM4710088.364ENSAPLG00000013974RBM4710088.702Anas_platyrhynchos
ENSSSCG00000008796RBM4710086.000ENSACAG00000011833RBM4710086.500Anolis_carolinensis
ENSSSCG00000008796RBM4710096.639ENSANAG00000029440RBM4710096.639Aotus_nancymaae
ENSSSCG00000008796RBM4710076.105ENSACLG00000016902rbm479585.196Astatotilapia_calliptera
ENSSSCG00000008796RBM4710075.862ENSAMXG00000021794rbm479584.034Astyanax_mexicanus
ENSSSCG00000008796RBM4710099.154ENSBTAG00000002356RBM4710099.154Bos_taurus
ENSSSCG00000008796RBM4710096.309ENSCJAG00000019385RBM4710096.309Callithrix_jacchus
ENSSSCG00000008796RBM479694.561ENSCAFG00000015898RBM4710093.098Canis_familiaris
ENSSSCG00000008796RBM478795.534ENSCAFG00020010558RBM479494.118Canis_lupus_dingo
ENSSSCG00000008796RBM4710099.154ENSCHIG00000026214RBM4710099.154Capra_hircus
ENSSSCG00000008796RBM479084.146ENSTSYG00000033612RBM479289.381Carlito_syrichta
ENSSSCG00000008796RBM4710088.364ENSCAPG00000008426RBM4710088.196Cavia_aperea
ENSSSCG00000008796RBM4710096.290ENSCPOG00000014100RBM4710096.290Cavia_porcellus
ENSSSCG00000008796RBM4710096.309ENSCCAG00000030129-10096.309Cebus_capucinus
ENSSSCG00000008796RBM479967.003ENSCCAG00000024397-9966.214Cebus_capucinus
ENSSSCG00000008796RBM4710096.954ENSCATG00000042064RBM4710096.954Cercocebus_atys
ENSSSCG00000008796RBM4710095.101ENSCLAG00000001684RBM4710094.764Chinchilla_lanigera
ENSSSCG00000008796RBM4710096.807ENSCSAG00000017060RBM4710096.807Chlorocebus_sabaeus
ENSSSCG00000008796RBM478893.671ENSCHOG00000011731RBM478893.671Choloepus_hoffmanni
ENSSSCG00000008796RBM4710091.107ENSCPBG00000013831RBM4710091.275Chrysemys_picta_bellii
ENSSSCG00000008796RBM4710096.785ENSCANG00000019997RBM4710096.785Colobus_angolensis_palliatus
ENSSSCG00000008796RBM478589.122ENSCGRG00001020102-10089.122Cricetulus_griseus_chok1gshd
ENSSSCG00000008796RBM4710092.953ENSCGRG00001000623-10093.121Cricetulus_griseus_chok1gshd
ENSSSCG00000008796RBM478588.740ENSCGRG00000014760-10088.740Cricetulus_griseus_crigri
ENSSSCG00000008796RBM4710092.114ENSCGRG00000007762-10094.304Cricetulus_griseus_crigri
ENSSSCG00000008796RBM4710075.418ENSCSEG00000004545rbm4710074.329Cynoglossus_semilaevis
ENSSSCG00000008796RBM4710075.966ENSCVAG00000020144rbm479385.352Cyprinodon_variegatus
ENSSSCG00000008796RBM4710077.393ENSDARG00000061985rbm479579.232Danio_rerio
ENSSSCG00000008796RBM4710096.447ENSDNOG00000046854RBM4710096.447Dasypus_novemcinctus
ENSSSCG00000008796RBM4710095.142ENSDORG00000010144Rbm4710095.142Dipodomys_ordii
ENSSSCG00000008796RBM4710095.812ENSETEG00000009194RBM4710095.812Echinops_telfairi
ENSSSCG00000008796RBM479957.119ENSEBUG00000011912rbm479575.000Eptatretus_burgeri
ENSSSCG00000008796RBM4710098.477ENSEASG00005008443RBM4710098.477Equus_asinus_asinus
ENSSSCG00000008796RBM4710098.477ENSECAG00000004400RBM4710098.477Equus_caballus
ENSSSCG00000008796RBM477594.805ENSEEUG00000001194RBM477595.671Erinaceus_europaeus
ENSSSCG00000008796RBM479975.879ENSELUG00000006148rbm479385.237Esox_lucius
ENSSSCG00000008796RBM4710098.139ENSFCAG00000012399RBM4710098.139Felis_catus
ENSSSCG00000008796RBM4710091.092ENSFALG00000002861RBM4710091.429Ficedula_albicollis
ENSSSCG00000008796RBM4710093.750ENSFDAG00000016326RBM4710092.905Fukomys_damarensis
ENSSSCG00000008796RBM4710077.013ENSFHEG00000007938rbm4710075.839Fundulus_heteroclitus
ENSSSCG00000008796RBM4710074.634ENSGMOG00000014802rbm479476.562Gadus_morhua
ENSSSCG00000008796RBM476492.573ENSGALG00000014267RBM4710092.573Gallus_gallus
ENSSSCG00000008796RBM476483.511ENSGAFG00000020571rbm479881.915Gambusia_affinis
ENSSSCG00000008796RBM4710074.020ENSGACG00000016223rbm479482.961Gasterosteus_aculeatus
ENSSSCG00000008796RBM4710091.275ENSGAGG00000020051RBM4710091.443Gopherus_agassizii
ENSSSCG00000008796RBM4710096.954ENSGGOG00000001367RBM4710096.954Gorilla_gorilla
ENSSSCG00000008796RBM4710075.856ENSHBUG00000003520rbm479585.196Haplochromis_burtoni
ENSSSCG00000008796RBM478590.244ENSHGLG00000016914RBM4710094.304Heterocephalus_glaber_female
ENSSSCG00000008796RBM4710084.941ENSHGLG00100003071-10083.756Heterocephalus_glaber_male
ENSSSCG00000008796RBM4710094.407ENSHGLG00100014028-10095.093Heterocephalus_glaber_male
ENSSSCG00000008796RBM479976.717ENSHCOG00000002074rbm479979.474Hippocampus_comes
ENSSSCG00000008796RBM4710077.983ENSIPUG00000004743rbm479783.616Ictalurus_punctatus
ENSSSCG00000008796RBM4710096.477ENSSTOG00000004727RBM4710096.477Ictidomys_tridecemlineatus
ENSSSCG00000008796RBM4710095.310ENSJJAG00000013823Rbm4710095.310Jaculus_jaculus
ENSSSCG00000008796RBM4710078.057ENSKMAG00000000084rbm4710077.090Kryptolebias_marmoratus
ENSSSCG00000008796RBM4710076.756ENSLBEG00000008436rbm4710075.000Labrus_bergylta
ENSSSCG00000008796RBM4710085.378ENSLACG00000007196RBM4710085.042Latimeria_chalumnae
ENSSSCG00000008796RBM4710082.185ENSLOCG00000012966rbm479680.532Lepisosteus_oculatus
ENSSSCG00000008796RBM4710095.966ENSLAFG00000011998RBM4710095.966Loxodonta_africana
ENSSSCG00000008796RBM4710096.954ENSMFAG00000037967RBM4710096.954Macaca_fascicularis
ENSSSCG00000008796RBM4710096.807ENSMMUG00000012036RBM4710098.446Macaca_mulatta
ENSSSCG00000008796RBM4710096.954ENSMNEG00000040774RBM4710096.954Macaca_nemestrina
ENSSSCG00000008796RBM4710098.730ENSMLEG00000041432RBM4710098.730Mandrillus_leucophaeus
ENSSSCG00000008796RBM4710076.683ENSMAMG00000019143rbm479585.393Mastacembelus_armatus
ENSSSCG00000008796RBM4710076.105ENSMZEG00005023659rbm479585.196Maylandia_zebra
ENSSSCG00000008796RBM4710090.468ENSMGAG00000012226RBM4710090.803Meleagris_gallopavo
ENSSSCG00000008796RBM4710093.277ENSMAUG00000006493Rbm4710094.304Mesocricetus_auratus
ENSSSCG00000008796RBM4710089.509ENSMICG00000026417RBM4710091.371Microcebus_murinus
ENSSSCG00000008796RBM4710093.939ENSMOCG00000021170Rbm4710096.203Microtus_ochrogaster
ENSSSCG00000008796RBM4710076.885ENSMMOG00000007260rbm479582.123Mola_mola
ENSSSCG00000008796RBM4710091.400ENSMODG00000007003RBM4710090.894Monodelphis_domestica
ENSSSCG00000008796RBM475281.994ENSMODG00000015426-9779.743Monodelphis_domestica
ENSSSCG00000008796RBM4710082.064ENSMODG00000020561-9783.538Monodelphis_domestica
ENSSSCG00000008796RBM4710077.013ENSMALG00000005167rbm4710081.746Monopterus_albus
ENSSSCG00000008796RBM4710093.423MGP_CAROLIEiJ_G0027258Rbm4710094.098Mus_caroli
ENSSSCG00000008796RBM4710093.761ENSMUSG00000070780Rbm4710094.435Mus_musculus
ENSSSCG00000008796RBM4710093.761MGP_PahariEiJ_G0017040Rbm4710094.435Mus_pahari
ENSSSCG00000008796RBM4710094.585MGP_SPRETEiJ_G0028253Rbm4710094.585Mus_spretus
ENSSSCG00000008796RBM4710097.475ENSMPUG00000006177RBM479597.181Mustela_putorius_furo
ENSSSCG00000008796RBM4710094.088ENSMLUG00000000889RBM4710094.595Myotis_lucifugus
ENSSSCG00000008796RBM4710093.950ENSNGAG00000003325Rbm4710094.790Nannospalax_galili
ENSSSCG00000008796RBM4710075.980ENSNBRG00000015092rbm479585.475Neolamprologus_brichardi
ENSSSCG00000008796RBM4710096.616ENSNLEG00000017151RBM4710096.616Nomascus_leucogenys
ENSSSCG00000008796RBM477286.916ENSMEUG00000009516-9986.118Notamacropus_eugenii
ENSSSCG00000008796RBM477596.281ENSOPRG00000016507-7596.281Ochotona_princeps
ENSSSCG00000008796RBM4710096.453ENSODEG00000004873RBM4710096.453Octodon_degus
ENSSSCG00000008796RBM4710076.268ENSONIG00000009061rbm479485.196Oreochromis_niloticus
ENSSSCG00000008796RBM4710087.102ENSOANG00000008978RBM4710087.940Ornithorhynchus_anatinus
ENSSSCG00000008796RBM4710096.622ENSOCUG00000012034RBM4710096.622Oryctolagus_cuniculus
ENSSSCG00000008796RBM4710077.349ENSORLG00000005847rbm479484.551Oryzias_latipes
ENSSSCG00000008796RBM4710077.517ENSORLG00020005154rbm479484.551Oryzias_latipes_hni
ENSSSCG00000008796RBM4710077.852ENSORLG00015000066rbm479484.831Oryzias_latipes_hsok
ENSSSCG00000008796RBM4710079.027ENSOMEG00000010730rbm4710081.746Oryzias_melastigma
ENSSSCG00000008796RBM4710087.986ENSOGAG00000025193-10087.648Otolemur_garnettii
ENSSSCG00000008796RBM4710097.306ENSOGAG00000029367-10097.306Otolemur_garnettii
ENSSSCG00000008796RBM4710090.186ENSOARG00000012711RBM4710090.186Ovis_aries
ENSSSCG00000008796RBM4710096.785ENSPPAG00000029763RBM4710096.785Pan_paniscus
ENSSSCG00000008796RBM4710094.755ENSPPRG00000012873RBM4710094.755Panthera_pardus
ENSSSCG00000008796RBM478594.223ENSPTIG00000017046RBM4710094.223Panthera_tigris_altaica
ENSSSCG00000008796RBM4710096.954ENSPTRG00000016006RBM4710096.954Pan_troglodytes
ENSSSCG00000008796RBM4710096.954ENSPANG00000005980RBM4710096.954Papio_anubis
ENSSSCG00000008796RBM479675.868ENSPKIG00000013431RBM479979.898Paramormyrops_kingsleyae
ENSSSCG00000008796RBM479678.010ENSPKIG00000005037rbm479583.754Paramormyrops_kingsleyae
ENSSSCG00000008796RBM478991.667ENSPSIG00000017516RBM479791.667Pelodiscus_sinensis
ENSSSCG00000008796RBM4710075.671ENSPMGG00000018540rbm4710080.952Periophthalmus_magnuspinnatus
ENSSSCG00000008796RBM4710094.118ENSPEMG00000011088Rbm4710094.958Peromyscus_maniculatus_bairdii
ENSSSCG00000008796RBM479680.069ENSPFOG00000007997rbm479484.916Poecilia_formosa
ENSSSCG00000008796RBM479679.861ENSPLAG00000002072rbm4710081.915Poecilia_latipinna
ENSSSCG00000008796RBM4710078.631ENSPMEG00000017492rbm4710081.746Poecilia_mexicana
ENSSSCG00000008796RBM479680.208ENSPREG00000008456rbm4710082.181Poecilia_reticulata
ENSSSCG00000008796RBM479882.095ENSPPYG00000014688RBM479881.990Pongo_abelii
ENSSSCG00000008796RBM478196.509ENSPCAG00000011879RBM478196.509Procavia_capensis
ENSSSCG00000008796RBM4710091.878ENSPCOG00000023451RBM4710092.217Propithecus_coquereli
ENSSSCG00000008796RBM4710096.465ENSPVAG00000003812RBM4710096.465Pteropus_vampyrus
ENSSSCG00000008796RBM4710075.570ENSPNYG00000022868rbm479585.196Pundamilia_nyererei
ENSSSCG00000008796RBM4710076.683ENSPNAG00000007940rbm479578.683Pygocentrus_nattereri
ENSSSCG00000008796RBM4710093.929ENSRNOG00000002408Rbm4710094.604Rattus_norvegicus
ENSSSCG00000008796RBM4710096.785ENSRBIG00000039601RBM4710096.785Rhinopithecus_bieti
ENSSSCG00000008796RBM4710096.785ENSRROG00000044696RBM4710096.785Rhinopithecus_roxellana
ENSSSCG00000008796RBM4710092.893ENSSBOG00000028475RBM4710097.107Saimiri_boliviensis_boliviensis
ENSSSCG00000008796RBM4710092.555ENSSHAG00000017576RBM4710091.709Sarcophilus_harrisii
ENSSSCG00000008796RBM4710075.042ENSSFOG00015024101RBM479776.430Scleropages_formosus
ENSSSCG00000008796RBM4710073.841ENSSFOG00015012445rbm479475.131Scleropages_formosus
ENSSSCG00000008796RBM4710075.410ENSSMAG00000009744rbm479483.427Scophthalmus_maximus
ENSSSCG00000008796RBM4710078.523ENSSDUG00000022684rbm4710082.011Seriola_dumerili
ENSSSCG00000008796RBM4710078.859ENSSLDG00000003109rbm479384.874Seriola_lalandi_dorsalis
ENSSSCG00000008796RBM478596.205ENSSARG00000001735RBM478496.205Sorex_araneus
ENSSSCG00000008796RBM4710088.067ENSSPUG00000007515RBM4710088.830Sphenodon_punctatus
ENSSSCG00000008796RBM4710078.859ENSSPAG00000001257rbm4710082.540Stegastes_partitus
ENSSSCG00000008796RBM4710090.236ENSTGUG00000008705RBM4710090.404Taeniopygia_guttata
ENSSSCG00000008796RBM4710076.471ENSTRUG00000014050rbm4710079.787Takifugu_rubripes
ENSSSCG00000008796RBM4710076.230ENSTNIG00000006127rbm479577.083Tetraodon_nigroviridis
ENSSSCG00000008796RBM477792.405ENSTBEG00000001607RBM477692.405Tupaia_belangeri
ENSSSCG00000008796RBM4710097.970ENSTTRG00000002839RBM4710097.970Tursiops_truncatus
ENSSSCG00000008796RBM4710097.306ENSUAMG00000021346RBM4710097.306Ursus_americanus
ENSSSCG00000008796RBM475797.945ENSVPAG00000000641-5797.945Vicugna_pacos
ENSSSCG00000008796RBM479695.255ENSVVUG00000014774RBM4710094.098Vulpes_vulpes
ENSSSCG00000008796RBM4710086.341ENSXETG00000012802rbm4710086.341Xenopus_tropicalis
ENSSSCG00000008796RBM478982.586ENSXCOG00000000780rbm4710081.649Xiphophorus_couchianus
ENSSSCG00000008796RBM4710077.517ENSXMAG00000009874rbm4710081.217Xiphophorus_maculatus

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