EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008887 (Gene tree)
Gene ID: 100518673
Gene Symbol: NAF1
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 40512 bases
Position: chr8:51972277-52012788
Accession: 100518673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009479	Gar1	PF04410.14	2.6e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009730	NAF1-201	1950	XM_003129014	ENSSSCP00000009479	461 (aa)	XP_003129062	F1RTX5

Gene Model

Click here to download ENSSSCG00000008887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008887	NAF1	100	69.478	ENSG00000145414	NAF1	95	92.500	Homo_sapiens
ENSSSCG00000008887	NAF1	100	72.107	ENSAMEG00000014688	NAF1	93	71.652	Ailuropoda_melanoleuca
ENSSSCG00000008887	NAF1	66	56.250	ENSAPLG00000003210	NAF1	89	56.698	Anas_platyrhynchos
ENSSSCG00000008887	NAF1	76	86.080	ENSANAG00000025253	NAF1	93	92.500	Aotus_nancymaae
ENSSSCG00000008887	NAF1	75	84.104	ENSBTAG00000034700	NAF1	96	79.769	Bos_taurus
ENSSSCG00000008887	NAF1	100	68.401	ENSCJAG00000012406	NAF1	95	90.000	Callithrix_jacchus
ENSSSCG00000008887	NAF1	64	81.544	ENSCAFG00000029679	NAF1	89	84.351	Canis_familiaris
ENSSSCG00000008887	NAF1	76	82.486	ENSCAFG00020005334	NAF1	93	72.706	Canis_lupus_dingo
ENSSSCG00000008887	NAF1	51	93.162	ENSCHIG00000018430	NAF1	95	77.247	Capra_hircus
ENSSSCG00000008887	NAF1	76	83.427	ENSTSYG00000005946	NAF1	88	94.737	Carlito_syrichta
ENSSSCG00000008887	NAF1	76	82.203	ENSCAPG00000017838	NAF1	83	84.810	Cavia_aperea
ENSSSCG00000008887	NAF1	100	68.800	ENSCPOG00000010331	NAF1	63	85.127	Cavia_porcellus
ENSSSCG00000008887	NAF1	76	84.091	ENSCATG00000022663	NAF1	95	92.500	Cercocebus_atys
ENSSSCG00000008887	NAF1	100	71.398	ENSCLAG00000017209	NAF1	100	71.183	Chinchilla_lanigera
ENSSSCG00000008887	NAF1	76	83.239	ENSCSAG00000003199	NAF1	63	84.177	Chlorocebus_sabaeus
ENSSSCG00000008887	NAF1	61	84.561	ENSCHOG00000011393	NAF1	57	84.912	Choloepus_hoffmanni
ENSSSCG00000008887	NAF1	75	55.028	ENSCPBG00000003379	NAF1	71	56.250	Chrysemys_picta_bellii
ENSSSCG00000008887	NAF1	76	84.091	ENSCANG00000039151	NAF1	95	92.500	Colobus_angolensis_palliatus
ENSSSCG00000008887	NAF1	100	67.418	ENSCGRG00001018484	Naf1	93	67.857	Cricetulus_griseus_chok1gshd
ENSSSCG00000008887	NAF1	63	82.818	ENSCGRG00000001742	Naf1	84	82.818	Cricetulus_griseus_crigri
ENSSSCG00000008887	NAF1	56	48.519	ENSDARG00000057929	naf1	52	48.519	Danio_rerio
ENSSSCG00000008887	NAF1	94	71.277	ENSDNOG00000031106	NAF1	92	73.626	Dasypus_novemcinctus
ENSSSCG00000008887	NAF1	76	80.966	ENSDORG00000011327	Naf1	68	83.228	Dipodomys_ordii
ENSSSCG00000008887	NAF1	76	50.980	ENSETEG00000002872	-	64	50.949	Echinops_telfairi
ENSSSCG00000008887	NAF1	100	71.944	ENSEASG00005022201	NAF1	100	71.743	Equus_asinus_asinus
ENSSSCG00000008887	NAF1	100	72.144	ENSECAG00000016738	NAF1	100	71.944	Equus_caballus
ENSSSCG00000008887	NAF1	67	68.571	ENSEEUG00000008335	-	100	67.937	Erinaceus_europaeus
ENSSSCG00000008887	NAF1	100	71.926	ENSFCAG00000031652	NAF1	93	72.788	Felis_catus
ENSSSCG00000008887	NAF1	83	54.598	ENSFALG00000011110	NAF1	66	56.013	Ficedula_albicollis
ENSSSCG00000008887	NAF1	100	73.448	ENSFDAG00000007497	NAF1	100	73.491	Fukomys_damarensis
ENSSSCG00000008887	NAF1	51	46.610	ENSFHEG00000015835	-	54	44.404	Fundulus_heteroclitus
ENSSSCG00000008887	NAF1	74	53.295	ENSGALG00000009496	NAF1	71	55.660	Gallus_gallus
ENSSSCG00000008887	NAF1	100	69.679	ENSGGOG00000000894	NAF1	95	92.500	Gorilla_gorilla
ENSSSCG00000008887	NAF1	76	81.534	ENSHGLG00000014899	NAF1	72	81.534	Heterocephalus_glaber_female
ENSSSCG00000008887	NAF1	76	81.534	ENSHGLG00100007507	NAF1	72	81.534	Heterocephalus_glaber_male
ENSSSCG00000008887	NAF1	71	39.024	ENSHCOG00000001581	-	68	43.636	Hippocampus_comes
ENSSSCG00000008887	NAF1	76	83.239	ENSSTOG00000023858	NAF1	63	84.494	Ictidomys_tridecemlineatus
ENSSSCG00000008887	NAF1	76	76.420	ENSJJAG00000012147	-	86	81.013	Jaculus_jaculus
ENSSSCG00000008887	NAF1	53	46.122	ENSLBEG00000020414	-	54	46.586	Labrus_bergylta
ENSSSCG00000008887	NAF1	74	54.412	ENSLOCG00000007989	NAF1	75	50.495	Lepisosteus_oculatus
ENSSSCG00000008887	NAF1	67	68.405	ENSLAFG00000009193	-	100	70.405	Loxodonta_africana
ENSSSCG00000008887	NAF1	76	83.523	ENSMFAG00000040952	NAF1	95	92.500	Macaca_fascicularis
ENSSSCG00000008887	NAF1	76	83.523	ENSMMUG00000001717	NAF1	95	92.500	Macaca_mulatta
ENSSSCG00000008887	NAF1	76	83.523	ENSMNEG00000032677	NAF1	95	92.500	Macaca_nemestrina
ENSSSCG00000008887	NAF1	76	83.523	ENSMLEG00000035330	NAF1	95	92.500	Mandrillus_leucophaeus
ENSSSCG00000008887	NAF1	62	56.811	ENSMGAG00000002133	NAF1	91	58.503	Meleagris_gallopavo
ENSSSCG00000008887	NAF1	100	71.367	ENSMAUG00000013072	Naf1	92	72.000	Mesocricetus_auratus
ENSSSCG00000008887	NAF1	100	71.800	ENSMOCG00000010360	Naf1	92	69.457	Microtus_ochrogaster
ENSSSCG00000008887	NAF1	51	52.675	ENSMODG00000028980	-	57	50.379	Monodelphis_domestica
ENSSSCG00000008887	NAF1	67	42.540	ENSMALG00000018482	-	50	47.710	Monopterus_albus
ENSSSCG00000008887	NAF1	75	80.460	MGP_CAROLIEiJ_G0031097	Naf1	55	81.731	Mus_caroli
ENSSSCG00000008887	NAF1	76	79.320	ENSMUSG00000014907	Naf1	52	81.329	Mus_musculus
ENSSSCG00000008887	NAF1	100	68.548	MGP_PahariEiJ_G0021563	-	64	82.595	Mus_pahari
ENSSSCG00000008887	NAF1	63	80.412	MGP_SPRETEiJ_G0032213	-	62	80.345	Mus_spretus
ENSSSCG00000008887	NAF1	100	71.107	ENSMPUG00000001861	NAF1	93	71.460	Mustela_putorius_furo
ENSSSCG00000008887	NAF1	100	69.592	ENSMLUG00000004627	NAF1	93	72.949	Myotis_lucifugus
ENSSSCG00000008887	NAF1	100	72.152	ENSNGAG00000023833	Naf1	93	72.235	Nannospalax_galili
ENSSSCG00000008887	NAF1	75	69.792	ENSNLEG00000006459	-	95	92.500	Nomascus_leucogenys
ENSSSCG00000008887	NAF1	100	74.082	ENSODEG00000006528	NAF1	100	73.868	Octodon_degus
ENSSSCG00000008887	NAF1	66	57.895	ENSONIG00000001826	-	77	46.350	Oreochromis_niloticus
ENSSSCG00000008887	NAF1	56	71.984	ENSOANG00000014157	-	82	61.628	Ornithorhynchus_anatinus
ENSSSCG00000008887	NAF1	76	83.523	ENSOCUG00000000485	NAF1	65	84.810	Oryctolagus_cuniculus
ENSSSCG00000008887	NAF1	67	41.566	ENSORLG00000002191	-	58	36.901	Oryzias_latipes
ENSSSCG00000008887	NAF1	75	53.261	ENSORLG00020013478	-	60	44.300	Oryzias_latipes_hni
ENSSSCG00000008887	NAF1	75	53.261	ENSORLG00015012985	-	61	43.590	Oryzias_latipes_hsok
ENSSSCG00000008887	NAF1	67	39.394	ENSOMEG00000021322	-	60	40.000	Oryzias_melastigma
ENSSSCG00000008887	NAF1	100	80.736	ENSOARG00000013716	NAF1	100	77.706	Ovis_aries
ENSSSCG00000008887	NAF1	100	69.478	ENSPPAG00000034674	NAF1	95	92.500	Pan_paniscus
ENSSSCG00000008887	NAF1	100	71.516	ENSPPRG00000003688	NAF1	93	72.566	Panthera_pardus
ENSSSCG00000008887	NAF1	100	71.516	ENSPTIG00000017246	NAF1	93	72.566	Panthera_tigris_altaica
ENSSSCG00000008887	NAF1	100	69.478	ENSPTRG00000016560	NAF1	95	92.500	Pan_troglodytes
ENSSSCG00000008887	NAF1	76	83.523	ENSPANG00000015574	NAF1	95	92.500	Papio_anubis
ENSSSCG00000008887	NAF1	80	56.686	ENSPSIG00000006545	NAF1	80	58.466	Pelodiscus_sinensis
ENSSSCG00000008887	NAF1	76	79.830	ENSPEMG00000014321	Naf1	81	80.696	Peromyscus_maniculatus_bairdii
ENSSSCG00000008887	NAF1	64	82.770	ENSPPYG00000029771	-	88	83.462	Pongo_abelii
ENSSSCG00000008887	NAF1	100	71.111	ENSPVAG00000016222	NAF1	93	71.678	Pteropus_vampyrus
ENSSSCG00000008887	NAF1	100	68.125	ENSRNOG00000026403	Naf1	98	70.192	Rattus_norvegicus
ENSSSCG00000008887	NAF1	100	65.932	ENSRBIG00000030027	NAF1	95	92.500	Rhinopithecus_bieti
ENSSSCG00000008887	NAF1	100	69.138	ENSRROG00000040912	NAF1	95	92.500	Rhinopithecus_roxellana
ENSSSCG00000008887	NAF1	76	85.795	ENSSBOG00000002085	NAF1	95	92.500	Saimiri_boliviensis_boliviensis
ENSSSCG00000008887	NAF1	74	47.347	ENSSFOG00015014207	naf1	56	43.448	Scleropages_formosus
ENSSSCG00000008887	NAF1	60	46.403	ENSSDUG00000005987	-	68	43.729	Seriola_dumerili
ENSSSCG00000008887	NAF1	54	62.646	ENSSPUG00000004087	NAF1	68	73.333	Sphenodon_punctatus
ENSSSCG00000008887	NAF1	55	46.457	ENSTRUG00000011908	-	69	46.768	Takifugu_rubripes
ENSSSCG00000008887	NAF1	52	85.294	ENSTBEG00000017005	-	52	85.294	Tupaia_belangeri
ENSSSCG00000008887	NAF1	100	77.564	ENSTTRG00000010106	NAF1	100	78.755	Tursiops_truncatus
ENSSSCG00000008887	NAF1	100	72.016	ENSUAMG00000017043	NAF1	93	71.556	Ursus_americanus
ENSSSCG00000008887	NAF1	100	71.811	ENSUMAG00000019748	NAF1	93	71.333	Ursus_maritimus
ENSSSCG00000008887	NAF1	76	82.486	ENSVVUG00000022303	NAF1	86	84.906	Vulpes_vulpes