EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000008900 (Gene tree)
Gene ID: 100520920
Gene Symbol: SRP72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 31389 bases
Position: chr8:55729247-55760635
Accession: 100520920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009492	SRP72	PF08492.12	8e-22	1	1
ENSSSCP00000037114	SRP72	PF08492.12	5.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009744	SRP72-201	1974	XM_021100536	ENSSSCP00000009492	657 (aa)	XP_020956195	F1RTV6
ENSSSCT00000053750	SRP72-202	1947	-	ENSSSCP00000037114	648 (aa)	-	A0A286ZZP8

Gene Model

Click here to download ENSSSCG00000008900's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008900	SRP72	98	94.207	ENSG00000174780	SRP72	99	94.118	Homo_sapiens
ENSSSCG00000008900	SRP72	99	66.069	ENSAPOG00000019438	srp72	99	66.214	Acanthochromis_polyacanthus
ENSSSCG00000008900	SRP72	100	94.048	ENSAMEG00000008469	SRP72	99	94.048	Ailuropoda_melanoleuca
ENSSSCG00000008900	SRP72	99	73.881	ENSACIG00000000488	srp72	99	74.024	Amphilophus_citrinellus
ENSSSCG00000008900	SRP72	100	74.107	ENSAOCG00000011256	srp72	99	74.471	Amphiprion_ocellaris
ENSSSCG00000008900	SRP72	100	73.810	ENSAPEG00000001512	srp72	99	74.169	Amphiprion_percula
ENSSSCG00000008900	SRP72	91	75.244	ENSATEG00000006781	srp72	99	75.410	Anabas_testudineus
ENSSSCG00000008900	SRP72	98	81.970	ENSAPLG00000008751	SRP72	98	81.818	Anas_platyrhynchos
ENSSSCG00000008900	SRP72	96	83.617	ENSACAG00000002381	SRP72	98	83.560	Anolis_carolinensis
ENSSSCG00000008900	SRP72	95	93.114	ENSANAG00000020836	-	92	93.720	Aotus_nancymaae
ENSSSCG00000008900	SRP72	99	74.551	ENSACLG00000014617	srp72	99	74.699	Astatotilapia_calliptera
ENSSSCG00000008900	SRP72	97	74.847	ENSAMXG00000004011	srp72	99	74.622	Astyanax_mexicanus
ENSSSCG00000008900	SRP72	100	94.048	ENSBTAG00000010593	SRP72	100	94.048	Bos_taurus
ENSSSCG00000008900	SRP72	98	92.988	ENSCJAG00000017998	SRP72	99	92.911	Callithrix_jacchus
ENSSSCG00000008900	SRP72	100	94.196	ENSCAFG00000002244	SRP72	100	94.196	Canis_familiaris
ENSSSCG00000008900	SRP72	99	94.188	ENSCAFG00020027338	SRP72	99	94.316	Canis_lupus_dingo
ENSSSCG00000008900	SRP72	98	92.097	ENSCHIG00000021465	SRP72	99	92.030	Capra_hircus
ENSSSCG00000008900	SRP72	99	93.890	ENSTSYG00000010571	-	99	93.890	Carlito_syrichta
ENSSSCG00000008900	SRP72	84	67.380	ENSCAPG00000016668	SRP72	100	83.871	Cavia_aperea
ENSSSCG00000008900	SRP72	98	93.750	ENSCPOG00000000218	SRP72	99	93.665	Cavia_porcellus
ENSSSCG00000008900	SRP72	95	92.645	ENSCCAG00000030683	-	92	93.237	Cebus_capucinus
ENSSSCG00000008900	SRP72	98	91.006	ENSCCAG00000030830	-	100	90.774	Cebus_capucinus
ENSSSCG00000008900	SRP72	98	94.055	ENSCATG00000008072	SRP72	99	93.967	Cercocebus_atys
ENSSSCG00000008900	SRP72	98	76.279	ENSCATG00000045359	-	95	76.535	Cercocebus_atys
ENSSSCG00000008900	SRP72	98	93.750	ENSCLAG00000003571	SRP72	99	93.665	Chinchilla_lanigera
ENSSSCG00000008900	SRP72	98	88.720	ENSCSAG00000005079	SRP72	99	88.688	Chlorocebus_sabaeus
ENSSSCG00000008900	SRP72	91	92.437	ENSCHOG00000013240	SRP72	89	94.545	Choloepus_hoffmanni
ENSSSCG00000008900	SRP72	95	84.137	ENSCPBG00000015015	SRP72	99	83.710	Chrysemys_picta_bellii
ENSSSCG00000008900	SRP72	94	40.758	ENSCING00000002417	-	98	40.643	Ciona_intestinalis
ENSSSCG00000008900	SRP72	92	40.465	ENSCSAVG00000011288	-	99	40.348	Ciona_savignyi
ENSSSCG00000008900	SRP72	98	94.055	ENSCANG00000041709	SRP72	99	93.967	Colobus_angolensis_palliatus
ENSSSCG00000008900	SRP72	99	68.654	ENSCANG00000037920	-	98	69.231	Colobus_angolensis_palliatus
ENSSSCG00000008900	SRP72	100	94.048	ENSCGRG00001013548	Srp72	99	94.268	Cricetulus_griseus_chok1gshd
ENSSSCG00000008900	SRP72	94	94.006	ENSCGRG00000003013	Srp72	99	94.006	Cricetulus_griseus_crigri
ENSSSCG00000008900	SRP72	97	74.732	ENSCSEG00000003616	srp72	99	74.699	Cynoglossus_semilaevis
ENSSSCG00000008900	SRP72	90	75.041	ENSCVAG00000001520	srp72	99	75.207	Cyprinodon_variegatus
ENSSSCG00000008900	SRP72	84	74.386	ENSDARG00000014139	srp72	99	73.737	Danio_rerio
ENSSSCG00000008900	SRP72	97	88.720	ENSDNOG00000039012	SRP72	82	89.323	Dasypus_novemcinctus
ENSSSCG00000008900	SRP72	96	93.643	ENSDORG00000000171	Srp72	100	92.857	Dipodomys_ordii
ENSSSCG00000008900	SRP72	91	39.744	FBgn0038810	Srp72	94	40.224	Drosophila_melanogaster
ENSSSCG00000008900	SRP72	96	92.857	ENSETEG00000005191	SRP72	100	92.560	Echinops_telfairi
ENSSSCG00000008900	SRP72	73	59.438	ENSEBUG00000003696	srp72	99	58.148	Eptatretus_burgeri
ENSSSCG00000008900	SRP72	98	93.750	ENSEASG00005017747	SRP72	99	93.665	Equus_asinus_asinus
ENSSSCG00000008900	SRP72	98	93.750	ENSECAG00000006920	SRP72	99	93.665	Equus_caballus
ENSSSCG00000008900	SRP72	100	73.708	ENSELUG00000022415	srp72	99	74.864	Esox_lucius
ENSSSCG00000008900	SRP72	100	93.899	ENSFCAG00000027600	SRP72	100	93.899	Felis_catus
ENSSSCG00000008900	SRP72	95	84.448	ENSFALG00000006713	SRP72	99	83.560	Ficedula_albicollis
ENSSSCG00000008900	SRP72	97	58.951	ENSFDAG00000009793	-	93	58.583	Fukomys_damarensis
ENSSSCG00000008900	SRP72	98	93.598	ENSFDAG00000002014	-	99	93.514	Fukomys_damarensis
ENSSSCG00000008900	SRP72	99	73.543	ENSFHEG00000017652	srp72	92	74.286	Fundulus_heteroclitus
ENSSSCG00000008900	SRP72	97	70.183	ENSGMOG00000005986	srp72	99	70.588	Gadus_morhua
ENSSSCG00000008900	SRP72	95	84.579	ENSGALG00000011403	SRP72	100	83.333	Gallus_gallus
ENSSSCG00000008900	SRP72	99	74.738	ENSGAFG00000017762	srp72	99	74.887	Gambusia_affinis
ENSSSCG00000008900	SRP72	99	72.197	ENSGACG00000016749	srp72	99	73.083	Gasterosteus_aculeatus
ENSSSCG00000008900	SRP72	86	84.111	ENSGAGG00000024611	SRP72	99	84.034	Gopherus_agassizii
ENSSSCG00000008900	SRP72	98	93.902	ENSGGOG00000013234	-	99	93.816	Gorilla_gorilla
ENSSSCG00000008900	SRP72	99	74.701	ENSHBUG00000020723	srp72	99	74.849	Haplochromis_burtoni
ENSSSCG00000008900	SRP72	97	72.111	ENSHGLG00000018597	-	100	72.523	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	51	74.706	ENSHGLG00000003496	-	97	74.706	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	89	84.697	ENSHGLG00000010633	-	98	85.753	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	97	88.190	ENSHGLG00000005029	-	99	87.481	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	86	88.696	ENSHGLG00000003950	-	99	89.140	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	98	93.750	ENSHGLG00000009791	SRP72	99	93.816	Heterocephalus_glaber_female
ENSSSCG00000008900	SRP72	86	88.261	ENSHGLG00100017133	-	99	88.688	Heterocephalus_glaber_male
ENSSSCG00000008900	SRP72	97	88.190	ENSHGLG00100011236	-	99	87.481	Heterocephalus_glaber_male
ENSSSCG00000008900	SRP72	98	93.750	ENSHGLG00100009021	SRP72	99	93.816	Heterocephalus_glaber_male
ENSSSCG00000008900	SRP72	97	72.457	ENSHGLG00100009346	-	99	71.495	Heterocephalus_glaber_male
ENSSSCG00000008900	SRP72	97	74.847	ENSHCOG00000013760	srp72	99	75.266	Hippocampus_comes
ENSSSCG00000008900	SRP72	100	74.405	ENSIPUG00000000210	srp72	99	74.773	Ictalurus_punctatus
ENSSSCG00000008900	SRP72	98	94.360	ENSSTOG00000007305	SRP72	99	94.268	Ictidomys_tridecemlineatus
ENSSSCG00000008900	SRP72	96	93.779	ENSJJAG00000018324	Srp72	99	93.213	Jaculus_jaculus
ENSSSCG00000008900	SRP72	99	73.763	ENSKMAG00000003776	srp72	99	73.383	Kryptolebias_marmoratus
ENSSSCG00000008900	SRP72	97	75.613	ENSLOCG00000002628	srp72	98	75.532	Lepisosteus_oculatus
ENSSSCG00000008900	SRP72	98	93.598	ENSLAFG00000018307	SRP72	99	93.514	Loxodonta_africana
ENSSSCG00000008900	SRP72	97	77.605	ENSMFAG00000037164	-	96	77.673	Macaca_fascicularis
ENSSSCG00000008900	SRP72	98	93.902	ENSMFAG00000031065	SRP72	99	93.967	Macaca_fascicularis
ENSSSCG00000008900	SRP72	93	72.964	ENSMMUG00000021262	-	95	72.668	Macaca_mulatta
ENSSSCG00000008900	SRP72	98	93.939	ENSMMUG00000016368	SRP72	96	94.281	Macaca_mulatta
ENSSSCG00000008900	SRP72	98	93.902	ENSMNEG00000038065	-	99	93.967	Macaca_nemestrina
ENSSSCG00000008900	SRP72	95	92.332	ENSMLEG00000030140	-	92	92.271	Mandrillus_leucophaeus
ENSSSCG00000008900	SRP72	99	74.251	ENSMAMG00000014989	srp72	88	74.398	Mastacembelus_armatus
ENSSSCG00000008900	SRP72	99	74.701	ENSMZEG00005003325	srp72	99	74.849	Maylandia_zebra
ENSSSCG00000008900	SRP72	92	80.129	ENSMGAG00000008567	SRP72	100	84.829	Meleagris_gallopavo
ENSSSCG00000008900	SRP72	98	94.091	ENSMAUG00000001237	Srp72	100	94.048	Mesocricetus_auratus
ENSSSCG00000008900	SRP72	95	92.175	ENSMICG00000008507	-	92	92.754	Microcebus_murinus
ENSSSCG00000008900	SRP72	100	94.196	ENSMOCG00000020309	Srp72	100	94.196	Microtus_ochrogaster
ENSSSCG00000008900	SRP72	100	72.363	ENSMMOG00000002627	srp72	99	73.002	Mola_mola
ENSSSCG00000008900	SRP72	95	83.645	ENSMODG00000020697	SRP72	99	83.535	Monodelphis_domestica
ENSSSCG00000008900	SRP72	99	73.952	ENSMALG00000003747	srp72	100	74.215	Monopterus_albus
ENSSSCG00000008900	SRP72	100	93.155	MGP_CAROLIEiJ_G0027323	Srp72	99	93.363	Mus_caroli
ENSSSCG00000008900	SRP72	100	93.155	ENSMUSG00000036323	Srp72	99	93.363	Mus_musculus
ENSSSCG00000008900	SRP72	99	93.514	MGP_PahariEiJ_G0017103	Srp72	99	93.514	Mus_pahari
ENSSSCG00000008900	SRP72	100	93.155	MGP_SPRETEiJ_G0028317	Srp72	99	93.363	Mus_spretus
ENSSSCG00000008900	SRP72	96	94.246	ENSMPUG00000004828	SRP72	99	93.816	Mustela_putorius_furo
ENSSSCG00000008900	SRP72	96	93.798	ENSMLUG00000007344	SRP72	98	93.524	Myotis_lucifugus
ENSSSCG00000008900	SRP72	100	93.155	ENSNGAG00000012595	Srp72	99	93.514	Nannospalax_galili
ENSSSCG00000008900	SRP72	99	71.407	ENSNBRG00000014492	srp72	99	71.536	Neolamprologus_brichardi
ENSSSCG00000008900	SRP72	97	87.939	ENSNLEG00000008806	-	99	87.783	Nomascus_leucogenys
ENSSSCG00000008900	SRP72	87	92.632	ENSMEUG00000005164	SRP72	90	90.991	Notamacropus_eugenii
ENSSSCG00000008900	SRP72	95	92.523	ENSOPRG00000012521	SRP72	99	92.006	Ochotona_princeps
ENSSSCG00000008900	SRP72	96	91.318	ENSODEG00000012214	SRP72	99	91.114	Octodon_degus
ENSSSCG00000008900	SRP72	99	74.701	ENSONIG00000001446	srp72	99	74.849	Oreochromis_niloticus
ENSSSCG00000008900	SRP72	96	69.492	ENSOANG00000008562	SRP72	98	69.624	Ornithorhynchus_anatinus
ENSSSCG00000008900	SRP72	97	93.435	ENSOCUG00000012226	SRP72	99	93.213	Oryctolagus_cuniculus
ENSSSCG00000008900	SRP72	99	73.163	ENSORLG00000020418	srp72	99	72.961	Oryzias_latipes
ENSSSCG00000008900	SRP72	99	72.714	ENSORLG00020009138	srp72	97	71.752	Oryzias_latipes_hni
ENSSSCG00000008900	SRP72	99	72.564	ENSORLG00015018251	srp72	99	72.356	Oryzias_latipes_hsok
ENSSSCG00000008900	SRP72	99	73.160	ENSOMEG00000022008	srp72	99	73.725	Oryzias_melastigma
ENSSSCG00000008900	SRP72	98	93.445	ENSOGAG00000003578	SRP72	99	93.514	Otolemur_garnettii
ENSSSCG00000008900	SRP72	98	94.360	ENSOARG00000004329	SRP72	99	94.268	Ovis_aries
ENSSSCG00000008900	SRP72	98	94.207	ENSPPAG00000042265	SRP72	99	94.118	Pan_paniscus
ENSSSCG00000008900	SRP72	98	69.706	ENSPPAG00000011428	-	94	70.886	Pan_paniscus
ENSSSCG00000008900	SRP72	81	75.094	ENSPPAG00000032490	-	96	72.251	Pan_paniscus
ENSSSCG00000008900	SRP72	96	94.099	ENSPPRG00000015991	SRP72	99	93.816	Panthera_pardus
ENSSSCG00000008900	SRP72	96	94.099	ENSPTIG00000018786	SRP72	99	93.816	Panthera_tigris_altaica
ENSSSCG00000008900	SRP72	79	76.200	ENSPTRG00000043609	-	96	72.426	Pan_troglodytes
ENSSSCG00000008900	SRP72	98	72.093	ENSPTRG00000048100	-	94	73.576	Pan_troglodytes
ENSSSCG00000008900	SRP72	98	94.207	ENSPTRG00000048466	-	99	94.118	Pan_troglodytes
ENSSSCG00000008900	SRP72	94	75.923	ENSPANG00000030230	-	97	76.585	Papio_anubis
ENSSSCG00000008900	SRP72	98	94.055	ENSPANG00000005495	SRP72	99	93.967	Papio_anubis
ENSSSCG00000008900	SRP72	93	83.706	ENSPSIG00000003003	SRP72	100	83.645	Pelodiscus_sinensis
ENSSSCG00000008900	SRP72	100	94.065	ENSPEMG00000012828	-	100	94.065	Peromyscus_maniculatus_bairdii
ENSSSCG00000008900	SRP72	96	87.616	ENSPCIG00000000732	SRP72	98	87.462	Phascolarctos_cinereus
ENSSSCG00000008900	SRP72	99	74.738	ENSPFOG00000003480	srp72	99	74.887	Poecilia_formosa
ENSSSCG00000008900	SRP72	99	74.738	ENSPLAG00000020122	srp72	99	74.887	Poecilia_latipinna
ENSSSCG00000008900	SRP72	99	74.439	ENSPMEG00000019988	srp72	99	74.586	Poecilia_mexicana
ENSSSCG00000008900	SRP72	99	74.439	ENSPREG00000006218	srp72	99	74.586	Poecilia_reticulata
ENSSSCG00000008900	SRP72	57	78.215	ENSPPYG00000009152	-	99	76.962	Pongo_abelii
ENSSSCG00000008900	SRP72	98	94.207	ENSPPYG00000014752	-	77	94.268	Pongo_abelii
ENSSSCG00000008900	SRP72	98	92.627	ENSPVAG00000005590	SRP72	99	92.553	Pteropus_vampyrus
ENSSSCG00000008900	SRP72	99	75.000	ENSPNYG00000001916	srp72	99	75.151	Pundamilia_nyererei
ENSSSCG00000008900	SRP72	99	74.513	ENSPNAG00000022424	srp72	99	74.622	Pygocentrus_nattereri
ENSSSCG00000008900	SRP72	100	91.220	ENSRNOG00000002100	LOC108348180	99	92.006	Rattus_norvegicus
ENSSSCG00000008900	SRP72	98	87.805	ENSRBIG00000042069	SRP72	99	88.084	Rhinopithecus_bieti
ENSSSCG00000008900	SRP72	98	74.268	ENSRBIG00000029328	-	97	74.510	Rhinopithecus_bieti
ENSSSCG00000008900	SRP72	98	94.055	ENSRROG00000035704	SRP72	99	93.967	Rhinopithecus_roxellana
ENSSSCG00000008900	SRP72	92	87.621	ENSSHAG00000000614	SRP72	95	87.461	Sarcophilus_harrisii
ENSSSCG00000008900	SRP72	99	76.162	ENSSFOG00015002026	srp72	99	76.169	Scleropages_formosus
ENSSSCG00000008900	SRP72	99	72.795	ENSSMAG00000007639	srp72	99	73.123	Scophthalmus_maximus
ENSSSCG00000008900	SRP72	99	73.952	ENSSDUG00000007345	srp72	98	74.849	Seriola_dumerili
ENSSSCG00000008900	SRP72	99	74.102	ENSSLDG00000021819	srp72	99	74.247	Seriola_lalandi_dorsalis
ENSSSCG00000008900	SRP72	75	90.526	ENSSARG00000005804	SRP72	75	90.152	Sorex_araneus
ENSSSCG00000008900	SRP72	95	83.801	ENSSPUG00000009740	SRP72	100	82.292	Sphenodon_punctatus
ENSSSCG00000008900	SRP72	99	73.503	ENSSPAG00000011565	srp72	99	74.398	Stegastes_partitus
ENSSSCG00000008900	SRP72	95	84.317	ENSTGUG00000004767	SRP72	99	83.283	Taeniopygia_guttata
ENSSSCG00000008900	SRP72	97	73.006	ENSTRUG00000009831	srp72	99	73.152	Takifugu_rubripes
ENSSSCG00000008900	SRP72	99	75.188	ENSTNIG00000013073	srp72	99	75.301	Tetraodon_nigroviridis
ENSSSCG00000008900	SRP72	84	94.643	ENSTBEG00000007394	SRP72	80	94.643	Tupaia_belangeri
ENSSSCG00000008900	SRP72	92	93.528	ENSTTRG00000010945	SRP72	100	93.218	Tursiops_truncatus
ENSSSCG00000008900	SRP72	58	94.531	ENSUAMG00000001701	SRP72	100	94.474	Ursus_americanus
ENSSSCG00000008900	SRP72	100	94.048	ENSUMAG00000008151	SRP72	100	94.048	Ursus_maritimus
ENSSSCG00000008900	SRP72	98	92.530	ENSVPAG00000000458	SRP72	99	92.609	Vicugna_pacos
ENSSSCG00000008900	SRP72	100	94.048	ENSVVUG00000006020	SRP72	100	94.048	Vulpes_vulpes
ENSSSCG00000008900	SRP72	94	75.981	ENSXETG00000010205	srp72	100	75.981	Xenopus_tropicalis
ENSSSCG00000008900	SRP72	99	73.848	ENSXMAG00000018000	srp72	99	74.286	Xiphophorus_maculatus