EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000008989 (Gene tree)
Gene ID: 100512848
Gene Symbol: CNOT6L
Alias: Ccr4b|DKFZp434K098
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 110831 bases
Position: chr8:73194478-73305308
Accession: 100512848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000009593	Exo_endo_phos	PF03372.23	1e-21	1	1
ENSSSCP00000039365	Exo_endo_phos	PF03372.23	1e-21	1	1
ENSSSCP00000043045	Exo_endo_phos	PF03372.23	1e-21	1	1
ENSSSCP00000056684	Exo_endo_phos	PF03372.23	1.1e-21	1	1
ENSSSCP00000041553	Exo_endo_phos	PF03372.23	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051409	CNOT6L-205	1668	XM_021100607	ENSSSCP00000056684	555 (aa)	XP_020956266	A0A287BJW7
ENSSSCT00000041786	CNOT6L-201	6694	XM_021100606	ENSSSCP00000041553	681 (aa)	XP_020956265	A0A287AC64
ENSSSCT00000040815	CNOT6L-202	6039	XM_021100613	ENSSSCP00000043045	550 (aa)	XP_020956272	F1RYS2
ENSSSCT00000009846	CNOT6L-204	3441	XM_021100610	ENSSSCP00000009593	550 (aa)	XP_020956269	F1RYS2
ENSSSCT00000056702	CNOT6L-203	5637	XM_021100608	ENSSSCP00000039365	550 (aa)	XP_020956267	F1RYS2

Gene Model

Click here to download ENSSSCG00000008989's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000008989	CNOT6L	100	79.710	ENSSSCG00000014009	CNOT6	100	79.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000008989	CNOT6L	100	99.820	ENSG00000138767	CNOT6L	100	100.000	Homo_sapiens
ENSSSCG00000008989	CNOT6L	100	83.784	ENSAPOG00000005894	cnot6l	100	84.324	Acanthochromis_polyacanthus
ENSSSCG00000008989	CNOT6L	100	99.455	ENSAMEG00000005570	CNOT6L	99	99.458	Ailuropoda_melanoleuca
ENSSSCG00000008989	CNOT6L	96	86.466	ENSACIG00000002515	cnot6l	100	84.865	Amphilophus_citrinellus
ENSSSCG00000008989	CNOT6L	100	80.180	ENSAOCG00000006705	cnot6l	100	80.721	Amphiprion_ocellaris
ENSSSCG00000008989	CNOT6L	100	81.013	ENSAPEG00000020035	cnot6l	100	81.555	Amphiprion_percula
ENSSSCG00000008989	CNOT6L	100	84.685	ENSATEG00000008774	cnot6l	100	85.045	Anabas_testudineus
ENSSSCG00000008989	CNOT6L	100	95.863	ENSAPLG00000003448	CNOT6L	100	95.863	Anas_platyrhynchos
ENSSSCG00000008989	CNOT6L	99	94.353	ENSACAG00000012099	CNOT6L	99	94.353	Anolis_carolinensis
ENSSSCG00000008989	CNOT6L	100	99.820	ENSANAG00000023917	CNOT6L	100	99.820	Aotus_nancymaae
ENSSSCG00000008989	CNOT6L	96	84.586	ENSACLG00000000879	cnot6l	100	83.063	Astatotilapia_calliptera
ENSSSCG00000008989	CNOT6L	100	83.514	ENSAMXG00000008943	cnot6l	98	82.790	Astyanax_mexicanus
ENSSSCG00000008989	CNOT6L	100	99.820	ENSBTAG00000049571	CNOT6L	100	99.820	Bos_taurus
ENSSSCG00000008989	CNOT6L	100	99.640	ENSCJAG00000014846	CNOT6L	100	99.640	Callithrix_jacchus
ENSSSCG00000008989	CNOT6L	100	99.636	ENSCAFG00000008699	CNOT6L	99	99.639	Canis_familiaris
ENSSSCG00000008989	CNOT6L	100	98.364	ENSCAFG00020011108	CNOT6L	100	98.364	Canis_lupus_dingo
ENSSSCG00000008989	CNOT6L	100	99.820	ENSCHIG00000006297	CNOT6L	100	99.820	Capra_hircus
ENSSSCG00000008989	CNOT6L	100	99.818	ENSTSYG00000009068	CNOT6L	100	99.818	Carlito_syrichta
ENSSSCG00000008989	CNOT6L	86	100.000	ENSCPOG00000010337	CNOT6L	100	100.000	Cavia_porcellus
ENSSSCG00000008989	CNOT6L	100	99.820	ENSCCAG00000025000	CNOT6L	100	99.820	Cebus_capucinus
ENSSSCG00000008989	CNOT6L	100	99.820	ENSCATG00000029623	CNOT6L	100	99.820	Cercocebus_atys
ENSSSCG00000008989	CNOT6L	100	98.909	ENSCLAG00000004598	CNOT6L	100	98.915	Chinchilla_lanigera
ENSSSCG00000008989	CNOT6L	100	99.820	ENSCSAG00000004580	CNOT6L	100	99.820	Chlorocebus_sabaeus
ENSSSCG00000008989	CNOT6L	74	100.000	ENSCHOG00000001108	-	75	100.000	Choloepus_hoffmanni
ENSSSCG00000008989	CNOT6L	100	96.545	ENSCPBG00000019403	CNOT6L	100	96.545	Chrysemys_picta_bellii
ENSSSCG00000008989	CNOT6L	100	99.820	ENSCANG00000028583	CNOT6L	100	99.820	Colobus_angolensis_palliatus
ENSSSCG00000008989	CNOT6L	100	97.838	ENSCGRG00001022099	Cnot6l	100	97.838	Cricetulus_griseus_chok1gshd
ENSSSCG00000008989	CNOT6L	100	97.091	ENSCGRG00000000543	Cnot6l	100	97.091	Cricetulus_griseus_crigri
ENSSSCG00000008989	CNOT6L	100	81.982	ENSCSEG00000014001	cnot6l	100	82.162	Cynoglossus_semilaevis
ENSSSCG00000008989	CNOT6L	76	82.100	ENSCSEG00000010395	-	98	82.100	Cynoglossus_semilaevis
ENSSSCG00000008989	CNOT6L	98	86.085	ENSCVAG00000021683	cnot6l	96	84.917	Cyprinodon_variegatus
ENSSSCG00000008989	CNOT6L	99	84.335	ENSDARG00000054597	cnot6l	98	83.424	Danio_rerio
ENSSSCG00000008989	CNOT6L	100	89.711	ENSDNOG00000004229	CNOT6L	99	98.754	Dasypus_novemcinctus
ENSSSCG00000008989	CNOT6L	100	89.273	ENSDORG00000011458	Cnot6l	100	89.273	Dipodomys_ordii
ENSSSCG00000008989	CNOT6L	100	71.226	ENSEBUG00000004849	cnot6l	100	70.337	Eptatretus_burgeri
ENSSSCG00000008989	CNOT6L	87	99.794	ENSEASG00005016429	CNOT6L	92	99.794	Equus_asinus_asinus
ENSSSCG00000008989	CNOT6L	93	99.805	ENSECAG00000001582	CNOT6L	88	99.805	Equus_caballus
ENSSSCG00000008989	CNOT6L	99	83.455	ENSELUG00000013353	cnot6l	88	83.032	Esox_lucius
ENSSSCG00000008989	CNOT6L	100	99.640	ENSFCAG00000008322	CNOT6L	100	99.640	Felis_catus
ENSSSCG00000008989	CNOT6L	100	95.818	ENSFALG00000008515	CNOT6L	100	95.495	Ficedula_albicollis
ENSSSCG00000008989	CNOT6L	100	99.273	ENSFDAG00000007719	CNOT6L	95	99.278	Fukomys_damarensis
ENSSSCG00000008989	CNOT6L	100	76.481	ENSFHEG00000012364	cnot6l	100	76.840	Fundulus_heteroclitus
ENSSSCG00000008989	CNOT6L	87	73.542	ENSGMOG00000000730	cnot6l	100	73.196	Gadus_morhua
ENSSSCG00000008989	CNOT6L	92	62.055	ENSGMOG00000011077	-	99	62.055	Gadus_morhua
ENSSSCG00000008989	CNOT6L	100	96.545	ENSGALG00000010333	CNOT6L	95	92.784	Gallus_gallus
ENSSSCG00000008989	CNOT6L	97	85.102	ENSGAFG00000006105	cnot6l	98	85.150	Gambusia_affinis
ENSSSCG00000008989	CNOT6L	87	95.625	ENSGAGG00000008605	CNOT6L	93	95.625	Gopherus_agassizii
ENSSSCG00000008989	CNOT6L	100	99.818	ENSGGOG00000023412	CNOT6L	99	99.819	Gorilla_gorilla
ENSSSCG00000008989	CNOT6L	99	82.703	ENSHBUG00000004755	cnot6l	95	84.647	Haplochromis_burtoni
ENSSSCG00000008989	CNOT6L	100	99.091	ENSHGLG00000006452	CNOT6L	100	99.091	Heterocephalus_glaber_female
ENSSSCG00000008989	CNOT6L	100	99.091	ENSHGLG00100012384	CNOT6L	99	98.566	Heterocephalus_glaber_male
ENSSSCG00000008989	CNOT6L	99	74.081	ENSHCOG00000009512	cnot6l	94	76.525	Hippocampus_comes
ENSSSCG00000008989	CNOT6L	100	82.609	ENSIPUG00000009879	cnot6l	100	82.246	Ictalurus_punctatus
ENSSSCG00000008989	CNOT6L	100	99.636	ENSSTOG00000015293	CNOT6L	100	99.636	Ictidomys_tridecemlineatus
ENSSSCG00000008989	CNOT6L	100	98.727	ENSJJAG00000020583	Cnot6l	100	98.734	Jaculus_jaculus
ENSSSCG00000008989	CNOT6L	100	82.523	ENSKMAG00000004165	cnot6l	100	82.883	Kryptolebias_marmoratus
ENSSSCG00000008989	CNOT6L	100	82.098	ENSLBEG00000027202	cnot6l	100	82.278	Labrus_bergylta
ENSSSCG00000008989	CNOT6L	100	91.636	ENSLACG00000004684	CNOT6L	100	90.909	Latimeria_chalumnae
ENSSSCG00000008989	CNOT6L	100	84.755	ENSLOCG00000007420	cnot6l	93	84.144	Lepisosteus_oculatus
ENSSSCG00000008989	CNOT6L	100	99.820	ENSLAFG00000011449	CNOT6L	100	99.479	Loxodonta_africana
ENSSSCG00000008989	CNOT6L	100	99.820	ENSMFAG00000044296	CNOT6L	100	99.820	Macaca_fascicularis
ENSSSCG00000008989	CNOT6L	100	99.818	ENSMMUG00000045609	CNOT6L	99	99.819	Macaca_mulatta
ENSSSCG00000008989	CNOT6L	100	99.820	ENSMNEG00000041259	CNOT6L	100	99.820	Macaca_nemestrina
ENSSSCG00000008989	CNOT6L	100	99.818	ENSMLEG00000029198	CNOT6L	99	99.819	Mandrillus_leucophaeus
ENSSSCG00000008989	CNOT6L	96	86.466	ENSMAMG00000016954	cnot6l	94	86.466	Mastacembelus_armatus
ENSSSCG00000008989	CNOT6L	96	84.586	ENSMZEG00005020235	cnot6l	100	83.063	Maylandia_zebra
ENSSSCG00000008989	CNOT6L	100	96.545	ENSMGAG00000005144	CNOT6L	100	96.036	Meleagris_gallopavo
ENSSSCG00000008989	CNOT6L	100	99.279	ENSMICG00000017026	CNOT6L	100	99.279	Microcebus_murinus
ENSSSCG00000008989	CNOT6L	100	97.838	ENSMOCG00000009451	Cnot6l	100	97.838	Microtus_ochrogaster
ENSSSCG00000008989	CNOT6L	100	84.353	ENSMMOG00000014621	cnot6l	100	84.144	Mola_mola
ENSSSCG00000008989	CNOT6L	100	97.818	ENSMODG00000011744	CNOT6L	85	89.382	Monodelphis_domestica
ENSSSCG00000008989	CNOT6L	96	85.902	ENSMALG00000006354	cnot6l	96	85.902	Monopterus_albus
ENSSSCG00000008989	CNOT6L	100	97.838	MGP_CAROLIEiJ_G0027429	Cnot6l	100	97.838	Mus_caroli
ENSSSCG00000008989	CNOT6L	100	97.838	ENSMUSG00000034724	Cnot6l	100	97.838	Mus_musculus
ENSSSCG00000008989	CNOT6L	100	97.838	MGP_PahariEiJ_G0017207	Cnot6l	100	97.838	Mus_pahari
ENSSSCG00000008989	CNOT6L	100	97.838	MGP_SPRETEiJ_G0028426	Cnot6l	100	97.838	Mus_spretus
ENSSSCG00000008989	CNOT6L	95	94.847	ENSMPUG00000003895	CNOT6L	100	94.847	Mustela_putorius_furo
ENSSSCG00000008989	CNOT6L	93	98.833	ENSMLUG00000000936	CNOT6L	100	98.833	Myotis_lucifugus
ENSSSCG00000008989	CNOT6L	100	97.477	ENSNGAG00000019803	Cnot6l	100	97.477	Nannospalax_galili
ENSSSCG00000008989	CNOT6L	86	82.427	ENSNBRG00000016345	cnot6l	80	80.522	Neolamprologus_brichardi
ENSSSCG00000008989	CNOT6L	100	99.820	ENSNLEG00000028820	CNOT6L	100	99.820	Nomascus_leucogenys
ENSSSCG00000008989	CNOT6L	80	84.354	ENSMEUG00000009767	-	77	84.247	Notamacropus_eugenii
ENSSSCG00000008989	CNOT6L	100	99.091	ENSODEG00000004161	CNOT6L	99	99.097	Octodon_degus
ENSSSCG00000008989	CNOT6L	96	84.358	ENSONIG00000013992	cnot6l	97	82.857	Oreochromis_niloticus
ENSSSCG00000008989	CNOT6L	100	98.364	ENSOANG00000003561	CNOT6L	100	98.364	Ornithorhynchus_anatinus
ENSSSCG00000008989	CNOT6L	100	99.640	ENSOCUG00000002497	CNOT6L	100	99.640	Oryctolagus_cuniculus
ENSSSCG00000008989	CNOT6L	100	81.736	ENSORLG00000018874	cnot6l	100	81.917	Oryzias_latipes
ENSSSCG00000008989	CNOT6L	100	82.194	ENSOMEG00000010026	cnot6l	100	82.162	Oryzias_melastigma
ENSSSCG00000008989	CNOT6L	100	95.856	ENSOGAG00000012122	CNOT6L	100	95.135	Otolemur_garnettii
ENSSSCG00000008989	CNOT6L	100	99.820	ENSOARG00000017771	CNOT6L	100	99.820	Ovis_aries
ENSSSCG00000008989	CNOT6L	100	96.909	ENSPPAG00000030178	-	100	96.909	Pan_paniscus
ENSSSCG00000008989	CNOT6L	84	100.000	ENSPPAG00000034242	-	99	100.000	Pan_paniscus
ENSSSCG00000008989	CNOT6L	100	99.640	ENSPPRG00000008857	CNOT6L	100	99.640	Panthera_pardus
ENSSSCG00000008989	CNOT6L	100	99.640	ENSPTIG00000015698	CNOT6L	100	99.640	Panthera_tigris_altaica
ENSSSCG00000008989	CNOT6L	84	100.000	ENSPTRG00000045291	-	99	100.000	Pan_troglodytes
ENSSSCG00000008989	CNOT6L	100	99.820	ENSPTRG00000016198	CNOT6L	100	99.820	Pan_troglodytes
ENSSSCG00000008989	CNOT6L	100	99.820	ENSPANG00000007831	CNOT6L	100	99.820	Papio_anubis
ENSSSCG00000008989	CNOT6L	100	85.870	ENSPKIG00000002892	cnot6l	100	84.601	Paramormyrops_kingsleyae
ENSSSCG00000008989	CNOT6L	100	95.636	ENSPSIG00000016241	CNOT6L	100	95.315	Pelodiscus_sinensis
ENSSSCG00000008989	CNOT6L	99	80.109	ENSPMGG00000004021	cnot6l	99	80.109	Periophthalmus_magnuspinnatus
ENSSSCG00000008989	CNOT6L	100	97.818	ENSPEMG00000011554	Cnot6l	100	97.818	Peromyscus_maniculatus_bairdii
ENSSSCG00000008989	CNOT6L	96	72.963	ENSPMAG00000005706	cnot6l	96	73.028	Petromyzon_marinus
ENSSSCG00000008989	CNOT6L	100	96.727	ENSPCIG00000027504	-	100	96.727	Phascolarctos_cinereus
ENSSSCG00000008989	CNOT6L	100	85.072	ENSPFOG00000013163	cnot6l	100	84.505	Poecilia_formosa
ENSSSCG00000008989	CNOT6L	100	84.892	ENSPLAG00000019862	cnot6l	100	84.324	Poecilia_latipinna
ENSSSCG00000008989	CNOT6L	100	84.892	ENSPMEG00000015834	cnot6l	100	84.324	Poecilia_mexicana
ENSSSCG00000008989	CNOT6L	100	84.505	ENSPREG00000003561	cnot6l	100	84.505	Poecilia_reticulata
ENSSSCG00000008989	CNOT6L	100	99.818	ENSPPYG00000014869	CNOT6L	100	99.818	Pongo_abelii
ENSSSCG00000008989	CNOT6L	100	67.387	ENSPCAG00000016617	CNOT6L	82	100.000	Procavia_capensis
ENSSSCG00000008989	CNOT6L	100	99.820	ENSPCOG00000014669	CNOT6L	100	99.820	Propithecus_coquereli
ENSSSCG00000008989	CNOT6L	83	99.287	ENSPVAG00000002690	CNOT6L	84	99.287	Pteropus_vampyrus
ENSSSCG00000008989	CNOT6L	87	82.816	ENSPNYG00000006717	cnot6l	92	81.028	Pundamilia_nyererei
ENSSSCG00000008989	CNOT6L	100	83.877	ENSPNAG00000003537	cnot6l	98	83.333	Pygocentrus_nattereri
ENSSSCG00000008989	CNOT6L	100	97.818	ENSRNOG00000002075	Cnot6l	100	97.818	Rattus_norvegicus
ENSSSCG00000008989	CNOT6L	100	99.455	ENSRBIG00000027644	CNOT6L	100	99.458	Rhinopithecus_bieti
ENSSSCG00000008989	CNOT6L	100	99.636	ENSRROG00000031003	CNOT6L	100	99.636	Rhinopithecus_roxellana
ENSSSCG00000008989	CNOT6L	100	99.818	ENSSBOG00000028521	CNOT6L	100	99.818	Saimiri_boliviensis_boliviensis
ENSSSCG00000008989	CNOT6L	100	97.818	ENSSHAG00000006072	CNOT6L	100	97.477	Sarcophilus_harrisii
ENSSSCG00000008989	CNOT6L	100	83.877	ENSSFOG00015019044	cnot6l	100	83.877	Scleropages_formosus
ENSSSCG00000008989	CNOT6L	100	82.734	ENSSMAG00000015568	cnot6l	100	82.162	Scophthalmus_maximus
ENSSSCG00000008989	CNOT6L	100	85.766	ENSSDUG00000018426	cnot6l	100	85.045	Seriola_dumerili
ENSSSCG00000008989	CNOT6L	100	85.586	ENSSLDG00000000335	cnot6l	100	84.865	Seriola_lalandi_dorsalis
ENSSSCG00000008989	CNOT6L	100	96.000	ENSSPUG00000002016	CNOT6L	100	96.000	Sphenodon_punctatus
ENSSSCG00000008989	CNOT6L	96	86.466	ENSSPAG00000022932	cnot6l	100	84.865	Stegastes_partitus
ENSSSCG00000008989	CNOT6L	100	96.182	ENSTGUG00000001737	-	100	95.856	Taeniopygia_guttata
ENSSSCG00000008989	CNOT6L	100	83.604	ENSTRUG00000004332	cnot6l	100	83.423	Takifugu_rubripes
ENSSSCG00000008989	CNOT6L	100	82.374	ENSTNIG00000016717	cnot6l	100	82.342	Tetraodon_nigroviridis
ENSSSCG00000008989	CNOT6L	87	94.203	ENSTBEG00000016519	CNOT6L	97	94.203	Tupaia_belangeri
ENSSSCG00000008989	CNOT6L	87	99.172	ENSTTRG00000005606	CNOT6L	100	99.172	Tursiops_truncatus
ENSSSCG00000008989	CNOT6L	100	99.455	ENSUAMG00000026982	CNOT6L	100	99.455	Ursus_americanus
ENSSSCG00000008989	CNOT6L	100	99.459	ENSUMAG00000007955	CNOT6L	100	99.459	Ursus_maritimus
ENSSSCG00000008989	CNOT6L	100	95.273	ENSVPAG00000010892	CNOT6L	100	95.298	Vicugna_pacos
ENSSSCG00000008989	CNOT6L	100	99.640	ENSVVUG00000024858	CNOT6L	100	99.704	Vulpes_vulpes
ENSSSCG00000008989	CNOT6L	100	90.182	ENSXETG00000000372	cnot6l	100	90.054	Xenopus_tropicalis
ENSSSCG00000008989	CNOT6L	100	83.964	ENSXMAG00000002900	cnot6l	100	83.604	Xiphophorus_maculatus