EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000008990 (Gene tree)
Gene ID
100513028
Gene Symbol
-
Alias
-
Full Name
mitochondrial ribosomal protein L1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
109125 bases
Position
chr8:73305439-73414563
Accession
100513028
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000009594Ribosomal_L1PF00687.211.1e-1511
ENSSSCP00000042683Ribosomal_L1PF00687.211.1e-1511
ENSSSCP00000040919Ribosomal_L1PF00687.211.3e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000054176-2828XM_021100616ENSSSCP00000040919320 (aa)XP_020956275A0A287AAV8
ENSSSCT00000038257-5016XM_003129122ENSSSCP00000042683304 (aa)XP_003129170A0A287AF82
ENSSSCT00000009847-2564XM_021100622ENSSSCP00000009594295 (aa)XP_020956281F1RYS1
Gene Model
Click here to download ENSSSCG00000008990's gene model file
Pathways
Pathway IDPathway NameSource
ssc03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000008990's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000008990-9984.868ENSAMEG00000005556-9284.539Ailuropoda_melanoleuca
ENSSSCG00000008990-9887.960ENSBTAG00000018360MRPL19286.957Bos_taurus
ENSSSCG00000008990-9681.570ENSCJAG00000047043-9379.801Callithrix_jacchus
ENSSSCG00000008990-9886.622ENSCAFG00000008710MRPL19384.918Canis_familiaris
ENSSSCG00000008990-8789.773ENSCAFG00020011079-9889.773Canis_lupus_dingo
ENSSSCG00000008990-9188.768ENSCHIG00000016193-9589.513Capra_hircus
ENSSSCG00000008990-9887.625ENSCHIG00000011183-9386.622Capra_hircus
ENSSSCG00000008990-9987.000ENSTSYG00000000522-9386.424Carlito_syrichta
ENSSSCG00000008990-9680.756ENSCCAG00000033201-9378.477Cebus_capucinus
ENSSSCG00000008990-9881.271ENSCATG00000023355-9379.801Cercocebus_atys
ENSSSCG00000008990-9580.208ENSCSAG00000004577-9184.470Chlorocebus_sabaeus
ENSSSCG00000008990-9886.288ENSEASG00005016425-9385.099Equus_asinus_asinus
ENSSSCG00000008990-9885.619ENSECAG00000040401MRPL19384.437Equus_caballus
ENSSSCG00000008990-9885.619ENSECAG00000034083MRPL19384.437Equus_caballus
ENSSSCG00000008990-9885.619ENSECAG00000037682MRPL19384.437Equus_caballus
ENSSSCG00000008990-9885.619ENSECAG00000029472MRPL19384.437Equus_caballus
ENSSSCG00000008990-9580.208ENSMMUG00000030317-9184.470Macaca_mulatta
ENSSSCG00000008990-9881.605ENSMNEG00000007399-9380.132Macaca_nemestrina
ENSSSCG00000008990-9985.197ENSMLUG00000011011-9484.416Myotis_lucifugus
ENSSSCG00000008990-9883.612ENSNLEG00000008205-9382.781Nomascus_leucogenys
ENSSSCG00000008990-9677.133ENSOPRG00000004022-9375.497Ochotona_princeps
ENSSSCG00000008990-9886.957ENSOARG00000017813-9385.430Ovis_aries
ENSSSCG00000008990-8791.255ENSPVAG00000002696-8490.441Pteropus_vampyrus
ENSSSCG00000008990-9679.038ENSSBOG00000005784-9377.483Saimiri_boliviensis_boliviensis
ENSSSCG00000008990-9790.878ENSTTRG00000011899-9189.189Tursiops_truncatus
ENSSSCG00000008990-9990.033ENSVPAG00000010894-9389.073Vicugna_pacos
ENSSSCG00000008990-9884.848ENSVVUG00000024857-9384.106Vulpes_vulpes

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us