EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000009015 (Gene tree)
Gene ID: 100518383
Gene Symbol: GATB
Alias: PET112|PET112L
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 100508 bases
Position: chr8:77222431-77322938
Accession: 100518383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000034986	GatB_Yqey	PF02637.18	1.9e-42	1	1
ENSSSCP00000036282	GatB_Yqey	PF02637.18	1.9e-42	1	1
ENSSSCP00000009619	GatB_Yqey	PF02637.18	2.8e-42	1	1
ENSSSCP00000022728	GatB_Yqey	PF02637.18	2.8e-42	1	1
ENSSSCP00000053388	GatB_Yqey	PF02637.18	3.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000009874	GATB-201	2084	XM_013989323	ENSSSCP00000009619	537 (aa)	XP_013844777	F1RSA4
ENSSSCT00000044753	GATB-202	3135	-	ENSSSCP00000034986	437 (aa)	-	A0A286ZTS8
ENSSSCT00000054577	GATB-204	3066	XM_021101518	ENSSSCP00000053388	557 (aa)	XP_020957177	A0A287BBE0
ENSSSCT00000028841	GATB-203	2134	-	ENSSSCP00000022728	537 (aa)	-	F1RSA4
ENSSSCT00000049603	GATB-205	2875	-	ENSSSCP00000036282	437 (aa)	-	A0A286ZTS8

Gene Model

Click here to download ENSSSCG00000009015's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00970	Aminoacyl-tRNA biosynthesis	KEGG
ssc01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000009015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000009015	GATB	99	85.550	ENSG00000059691	GATB	99	84.532	Homo_sapiens
ENSSSCG00000009015	GATB	99	64.302	ENSAPOG00000022676	gatb	92	65.606	Acanthochromis_polyacanthus
ENSSSCG00000009015	GATB	100	86.364	ENSAMEG00000018434	GATB	100	85.536	Ailuropoda_melanoleuca
ENSSSCG00000009015	GATB	99	64.073	ENSACIG00000015827	gatb	100	64.073	Amphilophus_citrinellus
ENSSSCG00000009015	GATB	99	64.073	ENSAOCG00000009635	gatb	95	66.197	Amphiprion_ocellaris
ENSSSCG00000009015	GATB	99	60.870	ENSAPEG00000023666	gatb	94	63.380	Amphiprion_percula
ENSSSCG00000009015	GATB	99	63.387	ENSATEG00000011821	gatb	97	63.496	Anabas_testudineus
ENSSSCG00000009015	GATB	99	71.789	ENSAPLG00000003933	GATB	99	74.494	Anas_platyrhynchos
ENSSSCG00000009015	GATB	99	70.642	ENSACAG00000002772	GATB	100	68.223	Anolis_carolinensis
ENSSSCG00000009015	GATB	99	85.321	ENSANAG00000020953	GATB	99	84.173	Aotus_nancymaae
ENSSSCG00000009015	GATB	99	64.465	ENSACLG00000026091	gatb	91	65.188	Astatotilapia_calliptera
ENSSSCG00000009015	GATB	99	60.909	ENSAMXG00000021662	gatb	89	62.525	Astyanax_mexicanus
ENSSSCG00000009015	GATB	100	91.304	ENSBTAG00000013914	GATB	100	89.946	Bos_taurus
ENSSSCG00000009015	GATB	100	85.812	ENSCJAG00000002147	GATB	100	84.740	Callithrix_jacchus
ENSSSCG00000009015	GATB	100	85.355	ENSCAFG00000008088	GATB	100	84.022	Canis_familiaris
ENSSSCG00000009015	GATB	100	85.355	ENSCAFG00020026686	GATB	100	83.662	Canis_lupus_dingo
ENSSSCG00000009015	GATB	100	92.677	ENSCHIG00000020111	GATB	100	91.023	Capra_hircus
ENSSSCG00000009015	GATB	99	88.303	ENSTSYG00000009976	GATB	99	86.691	Carlito_syrichta
ENSSSCG00000009015	GATB	99	73.441	ENSCAPG00000010977	GATB	99	69.259	Cavia_aperea
ENSSSCG00000009015	GATB	99	81.755	ENSCPOG00000005023	GATB	99	80.108	Cavia_porcellus
ENSSSCG00000009015	GATB	85	84.289	ENSCCAG00000021445	GATB	95	84.289	Cebus_capucinus
ENSSSCG00000009015	GATB	100	85.355	ENSCATG00000034281	GATB	100	84.022	Cercocebus_atys
ENSSSCG00000009015	GATB	99	82.679	ENSCLAG00000005772	GATB	99	82.766	Chinchilla_lanigera
ENSSSCG00000009015	GATB	100	85.355	ENSCSAG00000003318	GATB	100	83.842	Chlorocebus_sabaeus
ENSSSCG00000009015	GATB	100	82.380	ENSCHOG00000008476	GATB	100	81.867	Choloepus_hoffmanni
ENSSSCG00000009015	GATB	99	74.541	ENSCPBG00000025824	GATB	99	70.619	Chrysemys_picta_bellii
ENSSSCG00000009015	GATB	100	84.668	ENSCANG00000029227	GATB	100	83.662	Colobus_angolensis_palliatus
ENSSSCG00000009015	GATB	99	82.339	ENSCGRG00001024051	GATB	99	82.766	Cricetulus_griseus_chok1gshd
ENSSSCG00000009015	GATB	99	82.339	ENSCGRG00000012974	GATB	99	82.766	Cricetulus_griseus_crigri
ENSSSCG00000009015	GATB	99	63.387	ENSCSEG00000004009	gatb	100	63.158	Cynoglossus_semilaevis
ENSSSCG00000009015	GATB	99	64.531	ENSCVAG00000017180	gatb	99	67.002	Cyprinodon_variegatus
ENSSSCG00000009015	GATB	99	63.761	ENSDARG00000037309	gatb	90	65.859	Danio_rerio
ENSSSCG00000009015	GATB	99	84.932	ENSDNOG00000012683	GATB	100	82.975	Dasypus_novemcinctus
ENSSSCG00000009015	GATB	99	82.949	ENSDORG00000010241	Gatb	99	81.588	Dipodomys_ordii
ENSSSCG00000009015	GATB	99	42.661	FBgn0039153	GatB	97	45.580	Drosophila_melanogaster
ENSSSCG00000009015	GATB	100	61.759	ENSETEG00000002356	GATB	100	61.759	Echinops_telfairi
ENSSSCG00000009015	GATB	57	42.800	ENSEBUG00000005611	-	95	42.800	Eptatretus_burgeri
ENSSSCG00000009015	GATB	100	88.787	ENSEASG00005015868	GATB	100	87.971	Equus_asinus_asinus
ENSSSCG00000009015	GATB	100	86.270	ENSECAG00000003539	GATB	100	85.817	Equus_caballus
ENSSSCG00000009015	GATB	86	78.161	ENSEEUG00000002311	GATB	86	78.161	Erinaceus_europaeus
ENSSSCG00000009015	GATB	99	62.014	ENSELUG00000013584	gatb	97	64.386	Esox_lucius
ENSSSCG00000009015	GATB	100	86.728	ENSFCAG00000003207	GATB	100	85.278	Felis_catus
ENSSSCG00000009015	GATB	99	71.101	ENSFALG00000002209	GATB	99	71.812	Ficedula_albicollis
ENSSSCG00000009015	GATB	99	83.486	ENSFDAG00000006426	GATB	99	84.468	Fukomys_damarensis
ENSSSCG00000009015	GATB	99	63.158	ENSFHEG00000008643	GATB	91	65.795	Fundulus_heteroclitus
ENSSSCG00000009015	GATB	99	63.844	ENSGMOG00000001575	gatb	100	66.260	Gadus_morhua
ENSSSCG00000009015	GATB	99	71.330	ENSGALG00000010097	GATB	96	69.963	Gallus_gallus
ENSSSCG00000009015	GATB	99	64.302	ENSGAFG00000014422	gatb	90	67.819	Gambusia_affinis
ENSSSCG00000009015	GATB	99	63.218	ENSGACG00000017143	gatb	99	64.898	Gasterosteus_aculeatus
ENSSSCG00000009015	GATB	99	75.000	ENSGAGG00000007826	GATB	99	71.378	Gopherus_agassizii
ENSSSCG00000009015	GATB	99	85.550	ENSGGOG00000011099	GATB	99	84.532	Gorilla_gorilla
ENSSSCG00000009015	GATB	98	65.888	ENSHBUG00000009656	gatb	90	66.869	Haplochromis_burtoni
ENSSSCG00000009015	GATB	100	81.465	ENSHGLG00000001316	GATB	100	81.780	Heterocephalus_glaber_female
ENSSSCG00000009015	GATB	100	81.693	ENSHGLG00100004289	GATB	99	81.915	Heterocephalus_glaber_male
ENSSSCG00000009015	GATB	99	64.155	ENSHCOG00000006270	gatb	90	65.795	Hippocampus_comes
ENSSSCG00000009015	GATB	99	63.616	ENSIPUG00000013560	gatb	90	65.323	Ictalurus_punctatus
ENSSSCG00000009015	GATB	99	85.057	ENSSTOG00000005689	GATB	99	83.784	Ictidomys_tridecemlineatus
ENSSSCG00000009015	GATB	99	83.945	ENSJJAG00000016979	Gatb	99	83.617	Jaculus_jaculus
ENSSSCG00000009015	GATB	99	65.217	ENSKMAG00000004727	gatb	92	66.600	Kryptolebias_marmoratus
ENSSSCG00000009015	GATB	99	63.387	ENSLBEG00000019511	gatb	96	63.277	Labrus_bergylta
ENSSSCG00000009015	GATB	99	60.230	ENSLACG00000004352	GATB	97	63.655	Latimeria_chalumnae
ENSSSCG00000009015	GATB	99	56.948	ENSLOCG00000008564	gatb	90	60.321	Lepisosteus_oculatus
ENSSSCG00000009015	GATB	100	84.668	ENSLAFG00000022607	GATB	100	84.022	Loxodonta_africana
ENSSSCG00000009015	GATB	100	85.812	ENSMMUG00000011048	GATB	100	84.201	Macaca_mulatta
ENSSSCG00000009015	GATB	100	85.584	ENSMNEG00000040147	GATB	100	84.201	Macaca_nemestrina
ENSSSCG00000009015	GATB	100	85.584	ENSMLEG00000042135	GATB	100	83.842	Mandrillus_leucophaeus
ENSSSCG00000009015	GATB	99	64.760	ENSMAMG00000013256	gatb	92	66.004	Mastacembelus_armatus
ENSSSCG00000009015	GATB	99	64.760	ENSMZEG00005008495	gatb	92	65.873	Maylandia_zebra
ENSSSCG00000009015	GATB	99	72.248	ENSMGAG00000004276	GATB	98	74.899	Meleagris_gallopavo
ENSSSCG00000009015	GATB	99	81.881	ENSMAUG00000019099	Gatb	99	82.766	Mesocricetus_auratus
ENSSSCG00000009015	GATB	99	87.156	ENSMICG00000004311	GATB	99	84.892	Microcebus_murinus
ENSSSCG00000009015	GATB	99	83.028	ENSMOCG00000017566	Gatb	99	83.830	Microtus_ochrogaster
ENSSSCG00000009015	GATB	99	51.945	ENSMMOG00000005376	gatb	91	52.642	Mola_mola
ENSSSCG00000009015	GATB	99	77.931	ENSMODG00000001031	GATB	99	75.495	Monodelphis_domestica
ENSSSCG00000009015	GATB	98	65.654	ENSMALG00000003418	gatb	91	67.880	Monopterus_albus
ENSSSCG00000009015	GATB	99	83.486	MGP_CAROLIEiJ_G0025120	Gatb	99	83.439	Mus_caroli
ENSSSCG00000009015	GATB	99	83.486	ENSMUSG00000028085	Gatb	99	84.255	Mus_musculus
ENSSSCG00000009015	GATB	99	83.716	MGP_PahariEiJ_G0026563	Gatb	99	83.617	Mus_pahari
ENSSSCG00000009015	GATB	99	83.028	MGP_SPRETEiJ_G0026062	Gatb	99	81.655	Mus_spretus
ENSSSCG00000009015	GATB	99	86.239	ENSMPUG00000007394	GATB	99	84.892	Mustela_putorius_furo
ENSSSCG00000009015	GATB	100	90.618	ENSMLUG00000008194	GATB	100	89.048	Myotis_lucifugus
ENSSSCG00000009015	GATB	100	81.922	ENSNGAG00000002152	Gatb	99	83.191	Nannospalax_galili
ENSSSCG00000009015	GATB	99	64.237	ENSNBRG00000005947	gatb	100	64.237	Neolamprologus_brichardi
ENSSSCG00000009015	GATB	99	86.468	ENSNLEG00000005836	GATB	99	84.892	Nomascus_leucogenys
ENSSSCG00000009015	GATB	99	77.011	ENSMEUG00000001479	GATB	99	78.990	Notamacropus_eugenii
ENSSSCG00000009015	GATB	99	84.633	ENSOPRG00000011496	GATB	99	81.867	Ochotona_princeps
ENSSSCG00000009015	GATB	99	81.293	ENSODEG00000005429	GATB	99	82.128	Octodon_degus
ENSSSCG00000009015	GATB	99	64.531	ENSONIG00000010059	gatb	92	65.675	Oreochromis_niloticus
ENSSSCG00000009015	GATB	99	77.011	ENSOANG00000005282	GATB	99	77.011	Ornithorhynchus_anatinus
ENSSSCG00000009015	GATB	100	85.126	ENSOCUG00000016875	GATB	99	82.226	Oryctolagus_cuniculus
ENSSSCG00000009015	GATB	99	62.125	ENSORLG00000007740	gatb	99	64.300	Oryzias_latipes
ENSSSCG00000009015	GATB	99	64.055	ENSORLG00020016385	gatb	91	65.600	Oryzias_latipes_hni
ENSSSCG00000009015	GATB	99	63.426	ENSOMEG00000003089	gatb	91	64.859	Oryzias_melastigma
ENSSSCG00000009015	GATB	100	85.355	ENSOGAG00000014181	GATB	100	83.483	Otolemur_garnettii
ENSSSCG00000009015	GATB	100	90.682	ENSOARG00000004355	GATB	100	89.643	Ovis_aries
ENSSSCG00000009015	GATB	99	85.550	ENSPPAG00000041690	GATB	99	84.532	Pan_paniscus
ENSSSCG00000009015	GATB	100	86.728	ENSPPRG00000004993	GATB	100	85.458	Panthera_pardus
ENSSSCG00000009015	GATB	100	86.728	ENSPTIG00000021433	GATB	100	85.637	Panthera_tigris_altaica
ENSSSCG00000009015	GATB	99	80.396	ENSPTRG00000016513	GATB	99	80.396	Pan_troglodytes
ENSSSCG00000009015	GATB	100	82.380	ENSPANG00000024036	GATB	100	81.688	Papio_anubis
ENSSSCG00000009015	GATB	99	63.761	ENSPKIG00000017076	gatb	97	65.408	Paramormyrops_kingsleyae
ENSSSCG00000009015	GATB	99	73.165	ENSPSIG00000017832	GATB	94	73.143	Pelodiscus_sinensis
ENSSSCG00000009015	GATB	99	52.632	ENSPMGG00000016497	gatb	89	56.137	Periophthalmus_magnuspinnatus
ENSSSCG00000009015	GATB	99	82.798	ENSPEMG00000011096	Gatb	99	82.979	Peromyscus_maniculatus_bairdii
ENSSSCG00000009015	GATB	99	77.471	ENSPCIG00000015213	GATB	99	75.000	Phascolarctos_cinereus
ENSSSCG00000009015	GATB	99	64.318	ENSPFOG00000009933	gatb	91	66.600	Poecilia_formosa
ENSSSCG00000009015	GATB	99	64.531	ENSPLAG00000015569	gatb	94	64.789	Poecilia_latipinna
ENSSSCG00000009015	GATB	99	63.844	ENSPMEG00000006100	gatb	94	63.984	Poecilia_mexicana
ENSSSCG00000009015	GATB	99	63.844	ENSPREG00000000128	gatb	94	63.655	Poecilia_reticulata
ENSSSCG00000009015	GATB	99	85.321	ENSPPYG00000015121	GATB	99	84.532	Pongo_abelii
ENSSSCG00000009015	GATB	99	64.209	ENSPCAG00000005950	GATB	99	64.209	Procavia_capensis
ENSSSCG00000009015	GATB	99	87.385	ENSPCOG00000021777	GATB	97	87.054	Propithecus_coquereli
ENSSSCG00000009015	GATB	100	88.558	ENSPVAG00000006891	GATB	99	86.355	Pteropus_vampyrus
ENSSSCG00000009015	GATB	99	64.760	ENSPNYG00000013884	gatb	92	65.873	Pundamilia_nyererei
ENSSSCG00000009015	GATB	99	64.302	ENSPNAG00000020150	gatb	89	65.720	Pygocentrus_nattereri
ENSSSCG00000009015	GATB	99	82.569	ENSRNOG00000037655	Gatb	99	81.115	Rattus_norvegicus
ENSSSCG00000009015	GATB	100	84.897	ENSRBIG00000006453	GATB	100	83.662	Rhinopithecus_bieti
ENSSSCG00000009015	GATB	100	84.897	ENSRROG00000041575	GATB	100	83.662	Rhinopithecus_roxellana
ENSSSCG00000009015	GATB	96	30.717	YBL080C	-	92	30.667	Saccharomyces_cerevisiae
ENSSSCG00000009015	GATB	100	84.897	ENSSBOG00000022495	GATB	100	83.662	Saimiri_boliviensis_boliviensis
ENSSSCG00000009015	GATB	99	77.471	ENSSHAG00000011763	GATB	99	73.874	Sarcophilus_harrisii
ENSSSCG00000009015	GATB	99	68.807	ENSSFOG00015015565	gatb	91	69.185	Scleropages_formosus
ENSSSCG00000009015	GATB	99	64.073	ENSSMAG00000003609	gatb	72	64.122	Scophthalmus_maximus
ENSSSCG00000009015	GATB	99	64.368	ENSSDUG00000019847	gatb	91	65.339	Seriola_dumerili
ENSSSCG00000009015	GATB	99	64.368	ENSSLDG00000010253	gatb	95	66.263	Seriola_lalandi_dorsalis
ENSSSCG00000009015	GATB	76	73.256	ENSSARG00000003212	GATB	76	73.256	Sorex_araneus
ENSSSCG00000009015	GATB	99	73.563	ENSSPUG00000014453	GATB	96	75.254	Sphenodon_punctatus
ENSSSCG00000009015	GATB	99	65.217	ENSSPAG00000014465	gatb	99	66.801	Stegastes_partitus
ENSSSCG00000009015	GATB	99	71.789	ENSTGUG00000004986	GATB	99	74.494	Taeniopygia_guttata
ENSSSCG00000009015	GATB	99	57.271	ENSTRUG00000015238	gatb	92	59.961	Takifugu_rubripes
ENSSSCG00000009015	GATB	93	63.391	ENSTNIG00000003378	gatb	99	63.391	Tetraodon_nigroviridis
ENSSSCG00000009015	GATB	79	65.607	ENSTBEG00000009804	GATB	88	63.364	Tupaia_belangeri
ENSSSCG00000009015	GATB	100	90.618	ENSTTRG00000010679	GATB	100	89.587	Tursiops_truncatus
ENSSSCG00000009015	GATB	100	87.872	ENSUAMG00000021441	GATB	100	87.074	Ursus_americanus
ENSSSCG00000009015	GATB	100	87.872	ENSUMAG00000016157	GATB	100	86.894	Ursus_maritimus
ENSSSCG00000009015	GATB	75	92.093	ENSVPAG00000010844	GATB	80	81.194	Vicugna_pacos
ENSSSCG00000009015	GATB	100	85.355	ENSVVUG00000025083	GATB	100	84.201	Vulpes_vulpes
ENSSSCG00000009015	GATB	99	68.046	ENSXETG00000034167	GATB	98	69.636	Xenopus_tropicalis
ENSSSCG00000009015	GATB	99	64.302	ENSXMAG00000008071	gatb	98	61.567	Xiphophorus_maculatus